RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TKTL2Q9H0I9 626 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 FSCN3Q9NQT6 498 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 ANLNQ9NQW6 1124 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 PAXBP1Q9Y5B6 917 aa16.57■□□□□ 0.24
USE1-201ENST00000263897 ACACBO00763 2458 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 ITIH6Q6UXX5 1313 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 I6L893 689 aaPredicted RBP16.56■□□□□ 0.24
USE1-201ENST00000263897 RNASEH1O60930 286 aaKnown RBP16.56■□□□□ 0.24
USE1-201ENST00000263897 CLDN11O75508 207 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 SYPP08247 313 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 CSRP1P21291 193 aaKnown RBP16.56■□□□□ 0.24
USE1-201ENST00000263897 MMP8P22894 467 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 NNMTP40261 264 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 IRAK1P51617 712 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 ATXN3P54252 364 aaPredicted RBP16.56■□□□□ 0.24
USE1-201ENST00000263897 SULT2A1Q06520 285 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 RNF219Q5W0B1 726 aaPredicted RBP16.56■□□□□ 0.24
USE1-201ENST00000263897 TRNP1Q6NT89 227 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 C1orf74Q96LT6 269 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 FAM129BQ96TA1 746 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 FEM1AQ9BSK4 669 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 GTPBP2Q9BX10 602 aaKnown RBP16.56■□□□□ 0.24
USE1-201ENST00000263897 BTBD1Q9H0C5 482 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 SCML1Q9UN30 329 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 TBC1D30Q9Y2I9 924 aa16.56■□□□□ 0.24
USE1-201ENST00000263897 PCDH15Q96QU1 1955 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 EDDM13A0A1B0GTR0 161 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 A0A1B0GTW7 788 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 DRGXA6NNA5 263 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 ENDOD1O94919 500 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 GGCXP38435 758 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 STK19P49842 368 aaPredicted RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 NOVA1P51513 510 aaKnown RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 CDH4P55283 916 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 TTC31Q49AM3 519 aaPredicted RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 ACBD5Q5T8D3 534 aaPredicted RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 SH3PXD2AQ5TCZ1 1133 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 PSAPL1Q6NUJ1 521 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 TRIM72Q6ZMU5 477 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 USP30Q70CQ3 517 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 BNIPLQ7Z465 357 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 ZNF683Q8IZ20 524 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 AOPEPQ8N6M6 819 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 OR52K2Q8NGK3 314 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 C1orf216Q8TAB5 229 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 SLC30A5Q8TAD4 765 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 PTPRN2Q92932 1015 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 MIR1-1HGQ9H1L0 117 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 PABPC3Q9H361 631 aaKnown RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 C6orf106Q9H6K1 298 aaPredicted RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 SGK2Q9HBY8 427 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 EIF2B4Q9UI10 523 aaKnown RBP16.55■□□□□ 0.24
USE1-201ENST00000263897 NCKAP1Q9Y2A7 1128 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 OR51B4Q9Y5P0 310 aa16.55■□□□□ 0.24
USE1-201ENST00000263897 GIPC1O14908 333 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 CNTN5O94779 1100 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 SEMA4FO95754 770 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
USE1-201ENST00000263897 ATP1A3P13637 1013 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 CEACAM1P13688 526 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 NUMBP49757 651 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 VASPP50552 380 aaPredicted RBP16.54■□□□□ 0.24
USE1-201ENST00000263897 SFSWAPQ12872 951 aaKnown RBP16.54■□□□□ 0.24
USE1-201ENST00000263897 CST6Q15828 149 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 ANO6Q4KMQ2 910 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 LRRC31Q6UY01 552 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 MMAAQ8IVH4 418 aaKnown RBP16.54■□□□□ 0.24
USE1-201ENST00000263897 MINDY1Q8N5J2 469 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 CFAP57Q96MR6 1250 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 TMPRSS4Q9NRS4 437 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 FBXL12Q9NXK8 326 aa16.54■□□□□ 0.24
USE1-201ENST00000263897 CHD8Q9HCK8 2581 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 UPK3BL1B0FP48 263 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 UPK3BL2E5RIL1 263 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 BCAT2O15382 392 aaPredicted RBP16.53■□□□□ 0.24
USE1-201ENST00000263897 OPHN1O60890 802 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 SLC8A1P32418 973 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 SEMA3BQ13214 749 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 ALFQ53S48 1182 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 PHLDB2Q86SQ0 1253 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 STK40Q8N2I9 435 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 HDDC3Q8N4P3 179 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 ZCCHC9Q8N567 271 aaKnown RBP16.53■□□□□ 0.24
USE1-201ENST00000263897 EMC1Q8N766 993 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 OR2I1PQ8NGU4 316 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 GANCQ8TET4 914 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 FRS2Q8WU20 508 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 HAPLN3Q96S86 360 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 BPIFA3Q9BQP9 254 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 ZDHHC5Q9C0B5 715 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 METTL5Q9NRN9 209 aaKnown RBP16.53■□□□□ 0.24
USE1-201ENST00000263897 DNAAF2Q9NVR5 837 aaKnown RBP16.53■□□□□ 0.24
USE1-201ENST00000263897 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.53■□□□□ 0.24
USE1-201ENST00000263897 SNX10Q9Y5X0 201 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 CABIN1Q9Y6J0 2220 aa16.53■□□□□ 0.24
USE1-201ENST00000263897 DOCK4Q8N1I0 1966 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 IGLV3-10A0A075B6K4 115 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 SMTNL1A8MU46 457 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms