RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 SPATA17Q96L03 361 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ZHX3Q9H4I2 956 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 STARD7Q9NQZ5 370 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 SH2B3Q9UQQ2 575 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 GOLGA4Q13439 2230 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 PRAMEF33A0A0G2JMD5 474 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ASPDHA6ND91 283 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 KIF2AO00139 706 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 NRIP1P48552 1158 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 GRIK3Q13003 919 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ZNF699Q32M78 642 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 TCEAL8Q8IYN2 117 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 CFAP52Q8N1V2 620 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 PCMTD1Q96MG8 357 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC6A17Q9H1V8 727 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 NFU1Q9UMS0 254 aa5.82□□□□□ -1.48
TOPBP1-201ENST00000260810 ANHXE9PGG2 379 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 FGF18O76093 207 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 COILP38432 576 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 FNTAP49354 379 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 ERVK-21P61565 698 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 PPP1R3AQ16821 1122 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 FAXCQ5TGI0 409 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 WDR78Q5VTH9 848 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 VITQ6UXI7 678 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 TRMT2BQ96GJ1 504 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 C8orf48Q96LL4 319 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 KLHL5Q96PQ7 755 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 OLFM1Q99784 485 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SCNN1AP37088 669 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 MAGEA1P43355 309 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SEMG2Q02383 582 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 ZSCAN1Q8NBB4 408 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 ZNF461Q8TAF7 563 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 EPS8L3Q8TE67 593 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 PIH1D2Q8WWB5 315 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 FAM167AQ96KS9 214 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 PNPLA8Q9NP80 782 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 KCNG1Q9UIX4 513 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 ANAPC7Q9UJX3 599 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 G3V2L1 256 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 USP12O75317 370 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 RPS6KA5O75582 802 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 THP07101 528 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 GPC5P78333 572 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC14A2Q15849 920 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC39A12Q504Y0 691 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 CENPUQ71F23 418 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 OTUD6AQ7L8S5 288 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 FAM172AQ8WUF8 416 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 MAP7D2Q96T17 732 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 FAM129BQ96TA1 746 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SIN3BO75182 1162 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SEMA7AO75326 666 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SOD2P04179 222 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 SSTR1P30872 391 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 ATICP31939 592 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 STK19P49842 368 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 OTUD4Q01804 1114 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 ZNF268Q14587 947 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 PSMD5Q16401 504 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 HP1BP3Q5SSJ5 553 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 UNC93AQ86WB7 457 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 BBS7Q8IWZ6 715 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 LRRC56Q8IYG6 542 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 TUBB1Q9H4B7 451 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 RNF216Q9NWF9 866 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 DNAJC16Q9Y2G8 782 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 BACE2Q9Y5Z0 518 aa5.81□□□□□ -1.48
TOPBP1-201ENST00000260810 OR51F1A6NGY5 319 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 ZNF487B1APH4 448 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 CALUO43852 315 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 MED26O95402 600 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 ALDH1A1P00352 501 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 PRKCHP24723 683 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 AXLP30530 894 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC6A11P48066 632 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 NFX1Q12986 1120 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 PTK6Q13882 451 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 ARHGEF6Q15052 776 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 MDM1Q8TC05 714 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 KLF6Q99612 283 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 SNAP91O60641 907 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC172P0C7W6 258 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 TAF10Q12962 218 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 LONRF2Q1L5Z9 754 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 TSEN54Q7Z6J9 526 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 NPAS4Q8IUM7 802 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 SMRP1Q8NCR6 262 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 MFSD3Q96ES6 412 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 KRT82Q9NSB4 513 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 LRRC14BA6NHZ5 514 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 LSM8O95777 96 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 ERCC2P18074 760 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 CD22P20273 847 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 BMP8BP34820 402 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 TMEM132AQ24JP5 1023 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 DCAF6Q58WW2 860 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 LRRC38Q5VT99 294 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 DDX53Q86TM3 631 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms