RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 FOXG1P55316 489 aaPredicted RBP5.54□□□□□ -1.52
TRA2B-201ENST00000259043 TWIST1Q15672 202 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 FAM110CQ1W6H9 321 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 GRAMD1BQ3KR37 738 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 ARHGAP15Q53QZ3 475 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 HSP90AB4PQ58FF6 505 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 EARS2Q5JPH6 523 aaKnown RBP5.54□□□□□ -1.52
TRA2B-201ENST00000259043 FAM209BQ5JX69 171 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 PIK3AP1Q6ZUJ8 805 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 TECPR1Q7Z6L1 1165 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 SRLQ86TD4 932 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 DPP9Q86TI2 863 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 C16orf71Q8IYS4 520 aaPredicted RBP5.54□□□□□ -1.52
TRA2B-201ENST00000259043 CCDC150Q8NCX0 1101 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 OVCA2Q8WZ82 227 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 VCPIP1Q96JH7 1222 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 EIF2AQ9BY44 585 aaKnown RBP5.54□□□□□ -1.52
TRA2B-201ENST00000259043 VPS4AQ9UN37 437 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 CRB1P82279 1406 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 COL18A1P39060 1754 aa5.54□□□□□ -1.52
TRA2B-201ENST00000259043 POLR3AO14802 1390 aaPredicted RBP5.54□□□□□ -1.52
TRA2B-201ENST00000259043 FAM234BA2RU67 622 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 C2CD4BA6NLJ0 364 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 RASA4BC9J798 803 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 INPPL1O15357 1258 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 ZSCAN9O15535 394 aaPredicted RBP5.53□□□□□ -1.52
TRA2B-201ENST00000259043 RASA4O43374 803 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 NTN1O95631 604 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 MYL3P08590 195 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 HOXA7P31268 230 aaPredicted RBP5.53□□□□□ -1.52
TRA2B-201ENST00000259043 HOXD12P35452 270 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 IGHMBP2P38935 993 aaKnown RBP5.53□□□□□ -1.52
TRA2B-201ENST00000259043 BTKQ06187 659 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 MAPKAPK3Q16644 382 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 LONRF1Q17RB8 773 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 SLC9C1Q4G0N8 1177 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 SPATA3Q8NHX4 192 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 PARD3BQ8TEW8 1205 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 RIPOR3Q96MK2 946 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 NUDT22Q9BRQ3 303 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 PLCB1Q9NQ66 1216 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 HEY2Q9UBP5 337 aa5.53□□□□□ -1.52
TRA2B-201ENST00000259043 SIRT4Q9Y6E7 314 aaPredicted RBP5.53□□□□□ -1.52
TRA2B-201ENST00000259043 ARHGEF28Q8N1W1 1705 aaKnown RBP5.53□□□□□ -1.52
TRA2B-201ENST00000259043 CNTNAP2Q9UHC6 1331 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 CCDC187A0A096LP49 1063 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 CTIFO43310 598 aaKnown RBP5.52□□□□□ -1.53
TRA2B-201ENST00000259043 SETSIPP0DME0 302 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 CYP19A1P11511 503 aaPredicted RBP5.52□□□□□ -1.53
TRA2B-201ENST00000259043 MATN1P21941 496 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 NDUFS1P28331 727 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 ZNF84P51523 738 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 BFSP2Q13515 415 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 CNGA3Q16281 694 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 CCDC144NLQ6NUI1 221 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 ACSM6Q6P461 480 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 KYAT3Q6YP21 454 aaKnown RBP5.52□□□□□ -1.53
TRA2B-201ENST00000259043 RBM44Q6ZP01 1051 aaKnown RBP5.52□□□□□ -1.53
TRA2B-201ENST00000259043 RFX6Q8HWS3 928 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 TXLNBQ8N3L3 684 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 AKAP1Q92667 903 aaKnown RBP eCLIP5.52□□□□□ -1.53
TRA2B-201ENST00000259043 ZFYVE19Q96K21 471 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 CCDC138Q96M89 665 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 FSCN3Q9NQT6 498 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 ARL8BQ9NVJ2 186 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.52□□□□□ -1.53
TRA2B-201ENST00000259043 BTAF1O14981 1849 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 PIK3C2AO00443 1686 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 ADCY9O60503 1353 aa5.52□□□□□ -1.53
TRA2B-201ENST00000259043 ATP10DQ9P241 1426 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 SLC22A23A1A5C7 686 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 ALADP13716 330 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 IDEP14735 1019 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 MMP8P22894 467 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 RPS6KB1P23443 525 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 EEF1GP26641 437 aaKnown RBP5.51□□□□□ -1.53
TRA2B-201ENST00000259043 SOX2P48431 317 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 NSUN2Q08J23 767 aaKnown RBP eCLIP5.51□□□□□ -1.53
TRA2B-201ENST00000259043 SEMA3BQ13214 749 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 STIM1Q13586 685 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 KRT72Q14CN4 511 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 C1orf228Q6PIY5 440 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.51□□□□□ -1.53
TRA2B-201ENST00000259043 OR2C3Q8N628 320 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 OR52L2PQ8NGH6 319 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 BCAS4Q8TDM0 211 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 GLMPQ8WWB7 406 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 TRMT61AQ96FX7 289 aaKnown RBP5.51□□□□□ -1.53
TRA2B-201ENST00000259043 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.51□□□□□ -1.535e-7■□□□□ 10.3
TRA2B-201ENST00000259043 CDCP1Q9H5V8 836 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 ASNSD1Q9NWL6 643 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 DTNAQ9Y4J8 743 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 HEMK1Q9Y5R4 338 aaPredicted RBP5.51□□□□□ -1.53
TRA2B-201ENST00000259043 SLIT3O75094 1523 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 RGPD5Q99666 1765 aa5.51□□□□□ -1.53
TRA2B-201ENST00000259043 ACEP12821 1306 aa5.5□□□□□ -1.53
TRA2B-201ENST00000259043 GXYLT2A0PJZ3 443 aa5.5□□□□□ -1.53
TRA2B-201ENST00000259043 VIPP01282 170 aa5.5□□□□□ -1.53
TRA2B-201ENST00000259043 FGF2P09038 288 aa5.5□□□□□ -1.53
TRA2B-201ENST00000259043 TMEM191BP0C7N4 346 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms