RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TPH1P17752 444 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 PDE1CQ14123 709 aaPredicted RBP22.17■■□□□ 1.14
CLN6-201ENST00000249806 CLLU1OSQ5K130 101 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 OTOP3Q7RTS5 596 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 SCD5Q86SK9 330 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 SCN4BQ8IWT1 228 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 UTP4Q969X6 686 aaKnown RBP22.17■■□□□ 1.14
CLN6-201ENST00000249806 ZNF669Q96BR6 464 aaPredicted RBP22.17■■□□□ 1.14
CLN6-201ENST00000249806 LRRC40Q9H9A6 602 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 FBXO6Q9NRD1 293 aaPredicted RBP22.17■■□□□ 1.14
CLN6-201ENST00000249806 ARHGEF38Q9NXL2 777 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 BFARQ9NZS9 450 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 TRHDEQ9UKU6 1024 aa22.17■■□□□ 1.14
CLN6-201ENST00000249806 DFFAO00273 331 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 CHUKO15111 745 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 MTSS1O43312 755 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 ATP5HO75947 161 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 BPGMP07738 259 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 TYMPP19971 482 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 SERPINB3P29508 390 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 GMPRP36959 345 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 ZNF135P52742 658 aaPredicted RBP22.16■■□□□ 1.14
CLN6-201ENST00000249806 CTC1Q2NKJ3 1217 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 SPANXN3Q5MJ09 141 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 SDHAF4Q5VUM1 108 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 ZCCHC23Q6ZST2 131 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 CNTD1Q8N815 330 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 SLC7A6OSQ96CW6 309 aaPredicted RBP22.16■■□□□ 1.14
CLN6-201ENST00000249806 MFSD3Q96ES6 412 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 NMUR1Q9HB89 426 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 RGS18Q9NS28 235 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 PAGE1O75459 146 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 MYL2P10916 166 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 PDE1BQ01064 536 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 PPM1JQ5JR12 505 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 ICE2Q659A1 982 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 GLB1LQ6UWU2 654 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 C4orf50Q6ZRC1 276 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 RNF180Q86T96 592 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 TMEM135Q86UB9 458 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 PRR11Q96HE9 360 aaPredicted RBP22.16■■□□□ 1.14
CLN6-201ENST00000249806 AGAP2Q99490 1192 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 NDFIP2Q9NV92 336 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 ABI2Q9NYB9 513 aaPredicted RBP22.16■■□□□ 1.14
CLN6-201ENST00000249806 PCDHB8Q9UN66 801 aa22.16■■□□□ 1.14
CLN6-201ENST00000249806 GSRP00390 522 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 IL1BP01584 269 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 LINC01599Q8WXQ3 324 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 ATXN7L3BQ96GX2 97 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 CHRAC1Q9NRG0 131 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 TXNDC16Q9P2K2 825 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 EMCNQ9ULC0 261 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 BPTFQ12830 3046 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 CASP8AP2Q9UKL3 1982 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 ZCWPW2A0A1B0GU75 182 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 SP3Q02447 781 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 RIPK1Q13546 671 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 N4BP2L1Q5TBK1 243 aaPredicted RBP22.15■■□□□ 1.14
CLN6-201ENST00000249806 ATG16L1Q676U5 607 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 ITPRIPL1Q6GPH6 555 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 TRAF7Q6Q0C0 670 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 TRIM42Q8IWZ5 723 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.15■■□□□ 1.14
CLN6-201ENST00000249806 AZIN2Q96A70 460 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 FCRL2Q96LA5 508 aaPredicted RBP22.15■■□□□ 1.14
CLN6-201ENST00000249806 VAT1Q99536 393 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 LRMDAQ9H2I8 198 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 OSER1Q9NX31 292 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 DNAJB4Q9UDY4 337 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 PRG3Q9Y2Y8 225 aaPredicted RBP22.15■■□□□ 1.14
CLN6-201ENST00000249806 MTO1Q9Y2Z2 717 aaKnown RBP22.15■■□□□ 1.14
CLN6-201ENST00000249806 PATJQ8NI35 1801 aa22.15■■□□□ 1.14
CLN6-201ENST00000249806 E2F8A0AVK6 867 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 ALDH1A1P00352 501 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 KITP10721 976 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 OR1G1P47890 313 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 OCRLQ01968 901 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 ANKRD20A4Q4UJ75 823 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 SLC24A5Q71RS6 500 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 BEND5Q7L4P6 421 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 ARHGAP12Q8IWW6 846 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 SPATA22Q8NHS9 363 aa22.14■■□□□ 1.14
CLN6-201ENST00000249806 ZNF419Q96HQ0 510 aaPredicted RBP22.14■■□□□ 1.14
CLN6-201ENST00000249806 THSD7BQ9C0I4 1608 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 A0A1W2PQH9 124 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 ERI2A8K979 691 aaKnown RBP22.14■■□□□ 1.13
CLN6-201ENST00000249806 INPPL1O15357 1258 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 AOC2O75106 756 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 ZNF189O75820 626 aaPredicted RBP22.14■■□□□ 1.13
CLN6-201ENST00000249806 MOCS2O96007 188 aaPredicted RBP22.14■■□□□ 1.13
CLN6-201ENST00000249806 PAX3P23760 479 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 CCR1P32246 355 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 GP5P40197 560 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 GPR15P49685 360 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 DSC1Q08554 894 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 NAB1Q13506 487 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 DDR2Q16832 855 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 HSF5Q4G112 596 aaPredicted RBP22.14■■□□□ 1.13
CLN6-201ENST00000249806 ARTNQ5T4W7 220 aa22.14■■□□□ 1.13
CLN6-201ENST00000249806 ACMSDQ8TDX5 336 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms