RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ZNF618Q5T7W0 954 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF57Q68EA5 555 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 DOK6Q6PKX4 331 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 AENQ8WTP8 325 aaKnown RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PRCCQ92733 491 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PANX3Q96QZ0 392 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 GINS4Q9BRT9 223 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 CCDC167Q9P0B6 97 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 CLOCKO15516 846 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 PHGDHO43175 533 aaKnown RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 SLITRK3O94933 977 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 NUDT14O95848 222 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CYP1A1P04798 512 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CAPN1P07384 714 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ENO2P09104 434 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 JAK1P23458 1154 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CDH8P55286 799 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ERVK-9P63128 1117 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 PPIL2Q13356 520 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 NEDD8Q15843 81 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 SLC39A12Q504Y0 691 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CACTIN-AS1Q8N1I8 211 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CYP2W1Q8TAV3 490 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ASB7Q9H672 318 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 UBA2Q9UBT2 640 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 FBXO10Q9UK96 956 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 TPRKBQ9Y3C4 175 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 DEPDC5O75140 1603 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 NWD1Q149M9 1564 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 MYL12BO14950 172 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 USP17L7P0C7H9 530 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 VAV1P15498 845 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 HK2P52789 917 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 FAAP100Q0VG06 881 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 TBX2Q13207 712 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 FNDC3BQ53EP0 1204 aaKnown RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 DNAJC14Q6Y2X3 702 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ZCCHC23Q6ZST2 131 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CAMKK1Q8N5S9 505 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 TKTL2Q9H0I9 626 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ARHGAP28Q9P2N2 729 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 UXTQ9UBK9 157 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 MTA2O94776 668 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 IFNGR2P38484 337 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 PREPLQ4J6C6 727 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ZFP1Q6P2D0 407 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 FOXR1Q6PIV2 292 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CYP2R1Q6VVX0 501 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 POU5F2Q8N7G0 328 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ITFG1Q8TB96 612 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 STARD8Q92502 1023 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF75CPQ92670 426 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ASB2Q96Q27 587 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 OLFM1Q99784 485 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 DUSP9Q99956 384 aaKnown RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ARMCX1Q9P291 453 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 NDOR1Q9UHB4 597 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 C1orf232A0A0U1RR37 186 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 SASH3O75995 380 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CDK7P50613 346 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 IL27RAQ6UWB1 636 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF621Q6ZSS3 439 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 STK32CQ86UX6 486 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 GPSM1Q86YR5 675 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ZSCAN18Q8TBC5 510 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-201ENST00000230538 RORBQ92753 470 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 RAD21L1Q9H4I0 556 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 CATSPERZQ9NTU4 200 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 POLR1DQ9Y2S0 133 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 A8MX80 341 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ZBTB14O43829 449 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 HMGCRP04035 888 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ATP1A4Q13733 1029 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 NT5DC1Q5TFE4 455 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF410Q86VK4 478 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 SNX32Q86XE0 403 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 SYT12Q8IV01 421 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 MOSPD2Q8NHP6 518 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 TRAPPC9Q96Q05 1148 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
LAMA4-201ENST00000230538 KCNK1O00180 336 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 PQBP1O60828 265 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 TNFAIP8O95379 198 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 MED26O95402 600 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ATP5BP06576 529 aaKnown RBP11.74□□□□□ -0.53
LAMA4-201ENST00000230538 UMPSP11172 480 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ME2P23368 584 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 MMP13P45452 471 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 SNX30Q5VWJ9 437 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 KCNT2Q6UVM3 1135 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF605Q86T29 641 aa11.74□□□□□ -0.53
LAMA4-201ENST00000230538 PROX1Q92786 737 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms