RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 ZNF829Q3KNS6 432 aaPredicted RBP13.99□□□□□ -0.17
TNIP3-201ENST00000057513 CCDC92Q53HC0 331 aaPredicted RBP13.99□□□□□ -0.17
TNIP3-201ENST00000057513 RWDD4Q6NW29 188 aaKnown RBP13.99□□□□□ -0.17
TNIP3-201ENST00000057513 SCYL2Q6P3W7 929 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 WDR49Q8IV35 697 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 BRSK2Q8IWQ3 736 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 DEPTORQ8TB45 409 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 RXFP2Q8WXD0 754 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 PLEKHA8Q96JA3 519 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 PPP1R10Q96QC0 940 aaKnown RBP13.99□□□□□ -0.17
TNIP3-201ENST00000057513 RMDN3Q96TC7 470 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 PDCD2LQ9BRP1 358 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 PCDHAC1Q9H158 963 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 HIPK3Q9H422 1215 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 EFCAB1Q9HAE3 211 aa13.99□□□□□ -0.17
TNIP3-201ENST00000057513 C20orf96Q9NUD7 363 aaPredicted RBP13.99□□□□□ -0.17
TNIP3-201ENST00000057513 K7EPI3 171 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 HTRA2O43464 458 aaPredicted RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 MED7O43513 233 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 GCATO75600 419 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 GRAP2O75791 330 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ZBTB11O95625 1053 aaPredicted RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 LTFP02788 710 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 C8BP07358 591 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 PDGFRAP16234 1089 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ZNF24P17028 368 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 GPD1P21695 349 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 GABRB3P28472 473 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 CCR10P46092 362 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 C21orf59P57076 290 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 SESN2P58004 480 aaPredicted RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 RAB15P59190 212 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 PRAMEP78395 509 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 PTK2BQ14289 1009 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 DCAF6Q58WW2 860 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 FAM182BQ5T319 152 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 NANOGP8Q6NSW7 305 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 TMEM53Q6P2H8 277 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 XKR5Q6UX68 686 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 SETD3Q86TU7 594 aaPredicted RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 CENPSQ8N2Z9 138 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 RNF169Q8NCN4 708 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 DDHD1Q8NEL9 900 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 NEURL2Q9BR09 285 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 CNPY3Q9BT09 278 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ANKRD60Q9BZ19 345 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ILKAPQ9H0C8 392 aaPredicted RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 BRD8Q9H0E9 1235 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ADA2Q9NZK5 511 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 CDH7Q9ULB5 785 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 GOLGB1Q14789 3259 aaKnown RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 TMEM114B3SHH9 223 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 C9IYK1 514 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 TRIM38O00635 465 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 HDAC3O15379 428 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 F7P08709 466 aaPredicted RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ERVK-10P10266 1014 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ZNF12P17014 697 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 CDH8P55286 799 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 CA9Q16790 459 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 DACT2Q5SW24 774 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 SEL1L3Q68CR1 1132 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 DCLRE1AQ6PJP8 1040 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 MAMDC4Q6UXC1 1216 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 PODNQ7Z5L7 613 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ZBTB33Q86T24 672 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 CPSF7Q8N684 471 aaKnown RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ASB9Q96DX5 294 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 PIWIL1Q96J94 861 aaKnown RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 GATA5Q9BWX5 397 aaPredicted RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 PDZD7Q9H5P4 517 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ZNF385DQ9H6B1 395 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 RAVER2Q9HCJ3 691 aaKnown RBP13.98□□□□□ -0.17
TNIP3-201ENST00000057513 TXNDC16Q9P2K2 825 aa13.98□□□□□ -0.17
TNIP3-201ENST00000057513 ZNF701M0R085 212 aaPredicted RBP13.97□□□□□ -0.17
TNIP3-201ENST00000057513 TRIM13O60858 407 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 MGAT1P26572 445 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 TFAMQ00059 246 aaKnown RBP13.97□□□□□ -0.17
TNIP3-201ENST00000057513 SEMA5AQ13591 1074 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 ATP1A4Q13733 1029 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 RFTN1Q14699 578 aaPredicted RBP13.97□□□□□ -0.17
TNIP3-201ENST00000057513 PDK2Q15119 407 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 BSPRYQ5W0U4 402 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 NXNQ6DKJ4 435 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 CES3Q6UWW8 571 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 LYSMD3Q7Z3D4 306 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 DCLK2Q8N568 766 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 TBC1D15Q8TC07 691 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 ARNTL2Q8WYA1 636 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 PRMT6Q96LA8 375 aaPredicted RBP13.97□□□□□ -0.17
TNIP3-201ENST00000057513 NOL11Q9H8H0 719 aaKnown RBP13.97□□□□□ -0.17
TNIP3-201ENST00000057513 ZBTB26Q9HCK0 441 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 DUS2Q9NX74 493 aaKnown RBP13.97□□□□□ -0.17
TNIP3-201ENST00000057513 PTPRFP10586 1907 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 DOCK5Q9H7D0 1870 aa13.97□□□□□ -0.17
TNIP3-201ENST00000057513 A0A087WXM4 84 aa13.96□□□□□ -0.17
TNIP3-201ENST00000057513 KLRG2A4D1S0 409 aaPredicted RBP13.96□□□□□ -0.17
TNIP3-201ENST00000057513 TCAF2A6NFQ2 919 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms