RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Ccdc85aQ5SP85 500 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dusp11Q6NXK5 321 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 DstykQ6XUX1 927 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Olfr1505Q7TQQ2 316 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gprc5aQ8BHL4 356 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Nlrp4bQ8C6J9 863 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Syn3Q8JZP2 579 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Arfip2Q8K221 341 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Nudcd3Q8R1N4 363 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tbrg4Q91YM4 630 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 DdoQ922Z0 341 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mrps2Q924T2 291 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dhrs7bQ99J47 323 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dhrs1Q99L04 313 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 LiasQ99M04 373 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tex9Q9D845 387 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Il20Q9JKV9 176 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Fbxo17Q9QZM8 286 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Nme3Q9WV85 169 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 UtrnE9Q6R7 3430 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 CitP49025 2055 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Olfr1023A2ASU6 311 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Kpna7C0LLJ0 499 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Vmn2r27D3YUK6 857 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Akap5D3YVF0 745 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 PiggD3Z3Y1 983 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tmem265E9Q8G3 109 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gm3187M0QWW3 260 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 DldO08749 509 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Zfy1P10925 782 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Apobec1P51908 229 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Trmt10cQ3UFY8 414 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ptk6Q64434 451 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rnf168Q80XJ2 565 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Tbc1d10bQ8BHL3 798 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rps6kc1Q8BLK9 1056 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cgrrf1Q8BMJ7 332 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ero1aQ8R180 464 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pcdhb11Q91UZ8 797 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Atpaf2Q91YY4 289 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Serbp1Q9CY58 407 aaKnown RBP13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Atp6ap2Q9CYN9 350 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Q9D4A5 307 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Actrt2Q9D9L5 377 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 MycsQ9Z304 431 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 SrcapA0A087WQ44 3271 aa13.64□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Plin4O88492 1403 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Veph1A1A535 833 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pex10B1AUE5 324 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gm11236J3QMS7 360 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Slc1a6O35544 561 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Art2bO35975 289 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rtn2O70622 471 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Akr1b7P21300 316 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gdf7P43029 461 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 ItgavP43406 1044 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 NrlP54846 237 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 SnnP61807 88 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Meaf6Q2VPQ9 191 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ccdc61Q3UJV1 511 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Garnl3Q3V0G7 1038 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Syce2Q505B8 171 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Krt32Q62168 407 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Scaf4Q6PFF0 1209 aaKnown RBP13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Acap2Q6ZQK5 770 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Pan2Q8BGF7 1200 aaKnown RBP13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Thnsl1Q8BH55 747 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Nup54Q8BTS4 510 aaKnown RBP13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Mpp7Q8BVD5 576 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ccdc28bQ8CEG5 200 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Thoc1Q8R3N6 657 aaKnown RBP13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Fuca2Q99KR8 461 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Akirin1Q99LF1 191 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Chmp2aQ9DB34 222 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Olfr711Q9EPG2 314 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Fgf22Q9ESS2 162 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Arid3bQ9Z1N7 568 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Vmn2r25W4VSP2 855 aa13.63□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Gm42688A0A0R3P9D1 673 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Lcn6A2AJB9 181 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Zfp963D3Z2T8 383 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 BC049352E9Q2Z6 85 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 E030030I06RikJ3QML9 246 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Dsg3O35902 993 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 CrymO54983 313 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Slc2a7P0C6A1 513 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Acvr2bP27040 536 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Slc6a13P31649 602 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Acsl1P41216 699 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Itga4Q00651 1039 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Yy1Q00899 414 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cdk7Q03147 346 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Cntn3Q07409 1028 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Hhla1Q3TYV2 514 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 P3h1Q3V1T4 739 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ptpn14Q62130 1189 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ip6k1Q6PD10 433 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Rbm12b1Q80YR9 836 aaKnown RBP13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ofcc1Q8BGX4 166 aa13.62□□□□□ -0.23
Pdlim5-208ENSMUST00000196220 Ccdc142Q8CAI1 738 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms