RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Gm21964A0A1W2P7S4 437 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Fam43bA2AM80 330 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Skint8A7XV07 398 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 FancfE9Q5Z5 343 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tnfrsf18O35714 228 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ppargc1aO70343 797 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 FasP25446 327 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CremP27699 357 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PdgfbP31240 241 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pth1rP41593 591 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Eml1Q05BC3 814 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Sh3bp2Q06649 559 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zfp658Q5PPQ4 887 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pik3r5Q5SW28 871 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Krt32Q62168 407 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ssxb10Q6XAR7 170 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mindy1Q76LS9 468 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Q80Y73 168 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cstf2tQ8C7E9 632 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ccdc28aQ8CEI3 192 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lsm14bQ8CGC4 385 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Oas1cQ924S2 362 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 TMEM121BQ99MX7 572 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc39a5Q9D856 535 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cpne8Q9DC53 577 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Fbxl12Q9EPX5 326 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Sptbn2Q68FG2 2388 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zfp985A2A7A5 519 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm10722F6VLK5 217 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Fgf15O35622 218 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Il2P04351 169 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gdf7P43029 461 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pcyt1aP49586 367 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 St14P56677 855 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Krt86P97861 486 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Grin2cQ01098 1239 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Armc7Q3UJZ3 198 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Foxr1Q3UTB7 268 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tsr1Q5SWD9 803 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PapolaQ61183 739 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Sec23ipQ6NZC7 998 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mon1aQ6PDG8 556 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dclk2Q6PGN3 756 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Olfr867Q7TRF3 331 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ankzf1Q80UU1 748 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Arhgef33Q8BW86 850 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Taf5Q8C092 801 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PreplQ8C167 725 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cd300ldQ8VCH2 221 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atp6v1b1Q91YH6 513 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CmasQ99KK2 432 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 AdarQ99MU3 1178 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 MlxiplQ99MZ3 864 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ola1Q9CZ30 396 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Znf711A2ANX9 761 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Olfr310B2RVZ1 332 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rab11fip2G3XA57 512 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm3182K7N6T8 263 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nek2O35942 443 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 P01878 344 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 SrgnP13609 152 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Serpina3cP29621 417 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Caprin2Q05A80 1031 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tfap2bQ61313 459 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Map3k7Q62073 579 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mef2dQ63943 514 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Wdtc1Q80ZK9 677 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Psmd5Q8BJY1 504 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ankrd52Q8BTI7 1076 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 C130026I21RikQ8C898 291 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nkiras1Q8CEC5 192 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Thoc1Q8R3N6 657 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cadm1Q8R5M8 456 aaKnown RBP7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mtmr6Q8VE11 617 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 TraipQ8VIG6 470 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Trpd52l3Q9CQ14 231 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 3830403N18RikQ9D6C3 208 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 2010005H15RikQ9D8D6 97 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Stat2Q9WVL2 923 aa7.07□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Apc2Q9Z1K7 2274 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm597E9Q8J5 896 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ccdc149F6V035 524 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 P01650 108 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 P01653 108 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 TyrP11344 533 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PnpP23492 289 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 ProcP33587 460 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 TshrP47750 764 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Adamts8P57110 905 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Polr3bP59470 1133 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Itga4Q00651 1039 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pde1bQ01065 535 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Col6a2Q02788 1034 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zc4h2Q68FG0 224 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lsm8Q6ZWM4 96 aaKnown RBP7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Armc12Q80X86 340 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Shc2Q8BMC3 573 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Proser2Q8C5R2 471 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mtrf1Q8K126 446 aa7.06□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ccdc124Q9D8X2 217 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms