RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 MroQ7TNB4 248 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Wbp1lQ8BGW2 348 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Trim61Q8JZK6 461 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Tspan33Q8R3S2 283 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cybrd1Q925G2 290 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Ola1Q9CZ30 396 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Rpl34Q9D1R9 117 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 LrgukQ9D5S7 820 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gpatch1Q9DBM1 930 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Smok2bQ9QYZ3 484 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Smok2aQ9QYZ6 504 aa23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Stau1Q9Z108 487 aaKnown RBP23.47■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Serpina3iD3Z450 408 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cdh18E9Q9Q6 790 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gm7995L7N2E4 160 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Abl2Q4JIM5 1182 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Ifnl2Q4VK74 193 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 PdgfrlQ6PE55 375 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Q810S2 196 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Fra10ac1Q8BP78 315 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Phactr3Q8BYK5 558 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Trim60Q8VI40 466 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 SncbQ91ZZ3 133 aa23.46■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Kcnk16G5E845 292 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Zbtb11G5E8B9 1050 aaKnown RBP23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Cd160O88875 185 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Il2P04351 169 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Olfm3P63056 478 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 LnpkQ7TQ95 425 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Gpr20Q8BYC4 358 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Pih1h3bQ8C6P5 218 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Vangl2Q91ZD4 521 aa23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Noa1Q9JJG9 693 aaKnown RBP23.45■■□□□ 1.35
Upf3a-201ENSMUST00000043767 Umodl1Q5DID3 1319 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Aldoart1A6ZI46 419 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Zfp472B0V2W5 534 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Gm8882E9Q7E4 283 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Bmp2P21274 394 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 ZfaP23607 742 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Cyp2c65Q148B1 490 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 MlipQ5FW52 269 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 LpoQ5SW46 710 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Aldh1a2Q62148 518 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Atp11bQ6DFW5 1175 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Fam185aQ7TPD2 378 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Fnip2Q80TD3 1108 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Tmem120aQ8C1E7 343 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Acad9Q8JZN5 625 aaKnown RBP23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Tti1Q91V83 1085 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Tspan17Q9D7W4 270 aa23.45■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Srsf11E9Q6E5 511 aaKnown RBP23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Usp2O88623 613 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Casp8O89110 480 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Slc6a13P31649 602 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Gpr3P35413 330 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 GckP52792 465 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Pms2P54279 859 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Fmo3P97501 534 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Zdhhc18Q5Y5T2 380 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Olfr20Q7TRX9 314 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Il17reQ8BH06 637 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Shc2Q8BMC3 573 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Stx16Q8BVI5 326 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Nlrp4bQ8C6J9 863 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 AjubaQ91XC0 547 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Dpysl5Q9EQF6 564 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Scube2Q9JJS0 997 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Orc1Q9Z1N2 840 aaKnown RBP23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Nup62clA2AG10 272 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Gm5415E9PXF3 478 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Gad2P48320 585 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Ppp3ccP48455 513 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Rrp36Q3UFY0 244 aaKnown RBP23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Eif2b4Q61749 524 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Dpy19l3Q71B07 716 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Heatr3Q8BQM4 679 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Dnali1Q8BVN8 258 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Uhrf1Q8VDF2 782 aaKnown RBP23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Q99KU6 348 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Snf8Q9CZ28 258 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Lysmd1Q9D0E3 226 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 4930449I24RikQ9D5E3 319 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 QkiQ9QYS9 341 aaKnown RBP23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Mbd1Q9Z2E2 636 aa23.44■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Vmn2r27D3YUK6 857 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Folr1P35846 255 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Il12aP43431 215 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Lhx3P50481 400 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 TubP50586 505 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Mcm9Q2KHI9 1134 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Ceacam5Q3UKK2 947 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Gbp4Q61107 620 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 OcrlQ6NVF0 900 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Cdkn3Q810P3 211 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Enoph1Q8BGB7 257 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 CcnyQ8BGU5 341 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 4931406P16RikQ8C5X1 1059 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Arhgap18Q8K0Q5 663 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Vmn1r188Q8K3N2 308 aa23.43■■□□□ 1.34
Upf3a-201ENSMUST00000043767 Iqcf1Q9D9K8 182 aa23.43■■□□□ 1.34
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms