RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Lpar1P61793 364 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Sycp3P70281 254 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Polr1bP70700 1135 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Fam129aQ3UW53 926 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mysm1Q69Z66 819 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Brsk2Q69Z98 735 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Fnip2Q80TD3 1108 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 CcnyQ8BGU5 341 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Il17reQ8BH06 637 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Arhgef33Q8BW86 850 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Slco6c1Q8C0X7 706 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mettl24Q8CCB5 363 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Alas1Q8VC19 642 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Itm2cQ91VK4 269 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Msi2Q920Q6 346 aaKnown RBP15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Stk33Q924X7 491 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Lysmd3Q99LE3 305 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mtfr1Q99MB2 328 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Slc29a1Q9JIM1 460 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tnfrsf10bQ9QZM4 381 aa15.3■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tgfb2P27090 414 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Vps4bP46467 444 aaKnown RBP15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 NrlP54846 237 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 ThraP63058 492 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Pou2f2Q00196 463 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gm10392Q3V3I3 114 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 RetsatQ64FW2 609 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Arhgap10Q6Y5D8 786 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Atp2c1Q80XR2 918 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Pdk1Q8BFP9 434 aaKnown RBP15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Cept1Q8BGS7 416 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Bmp3Q8BHE5 468 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Kansl2Q8BQR4 486 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Clptm1lQ8BXA5 539 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Adamts2Q8C9W3 1213 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Slc15a5Q8CBB2 566 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Otud7aQ8R554 926 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 CygbQ9CX80 190 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tbc1d21Q9D9D3 336 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 1700080O16RikQ9D9G4 284 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Rab27aQ9ERI2 221 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Atp11cQ9QZW0 1129 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Shcbp1Q9Z179 668 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Adgra2Q91ZV8 1336 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Matn2O08746 956 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Krt10P02535 570 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 H2-Eb1P04230 264 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Hmgcs2P54869 508 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 CtswP56203 371 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ezh1P70351 747 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Adcy6Q01341 1165 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gdf3Q07104 366 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Gm1587Q3UT80 123 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Adrbk2Q3UYH7 688 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Slc22a16Q497L8 649 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Itih1Q61702 907 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Papd5Q68ED3 633 aaKnown RBP15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Tmem151aQ6GQT5 468 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Kctd12Q6WVG3 327 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Mapkap1Q8BKH7 522 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Clic5Q8BXK9 251 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Wdr59Q8C0M0 992 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Galnt5Q8C102 930 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Amer2Q8CCJ4 672 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Erich5Q8K0S2 362 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Lsm12Q9D0R8 195 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Vps28Q9D1C8 221 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Akr1c12Q9JLI0 323 aa15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 H2afyQ9QZQ8 372 aaKnown RBP15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 Polr2aP08775 1970 aaKnown RBP15.29■□□□□ 0.04
Nup54-201ENSMUST00000038514 CstaP56567 97 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Acot8P58137 320 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Traf6P70196 530 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Itga4Q00651 1039 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Sox8Q04886 464 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Oas1fQ14AZ4 364 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ag2Q3UPL5 249 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Rbm20Q3UQS8 1199 aaKnown RBP15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Arhgap1Q5FWK3 439 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Xkr4Q5GH67 647 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Fbxw2Q60584 422 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Znf148Q61624 794 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Prmt6Q6NZB1 378 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Olfr798Q7TRH8 311 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Catsper3Q80W99 395 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Zfp398Q8BV16 643 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 RtknQ8C6B2 564 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Eva1bQ8K2Y3 164 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 GldcQ91W43 1025 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Vangl2Q91ZD4 521 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Rnf111Q99ML9 989 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Micu3Q9CTY5 523 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Adgrf4Q9D2L6 698 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Rsph3bQ9DA80 389 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Cd320Q9Z1P5 260 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Rpl9-ps1S4R1R7 191 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 A630010A05RikA9C473 232 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Nlrp12E9Q5R7 1054 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Ccdc85cE9Q6B2 420 aa15.28■□□□□ 0.04
Nup54-201ENSMUST00000038514 Olfr292F8VQ84 308 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms