RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Mrps33Q9D2R8 106 aa8.14□□□□□ -1.11
Lig3-201ENSMUST00000021039 1700109H08RikQ9D9C0 210 aa8.14□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ccdc103Q9D9P2 237 aa8.14□□□□□ -1.11
Lig3-201ENSMUST00000021039 Atp5oQ9DB20 213 aaKnown RBP8.14□□□□□ -1.11
Lig3-201ENSMUST00000021039 Tada2bD3Z4Z0 420 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 4930558K02RikE0CXC6 182 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Mmp15O54732 657 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Smad1P70340 465 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Muc3aQ3U5A2 218 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Phactr4Q501J7 694 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Cdc14bQ6PFY9 485 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Mettl21cQ8BLU2 248 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Gdap1l1Q8VE33 370 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ccdc182Q9D9C6 152 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Fads3Q9JJE7 449 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ap4b1Q9WV76 738 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ddx39bQ9Z1N5 428 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ptgdr2Q9Z2J6 382 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Elf4Q9Z2U4 655 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Itpripl1A2ASA8 547 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 A630010A05RikA9C473 232 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Top3aO70157 1003 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Rab3ipQ68EF0 428 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Dennd2cQ6P9P8 914 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Rassf6Q80UQ2 353 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ubap2lQ80X50 1107 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 AA792892Q8C6S1 278 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Acsl5Q8JZR0 683 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Gtf2ird2Q99NI3 936 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 FopnlQ9CZS3 174 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Snx5Q9D8U8 404 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Maged2Q9ER67 616 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Acsl4Q9QUJ7 711 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Mapk9Q9WTU6 423 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Arih2Q9Z1K6 492 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ttll9A2APC3 461 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Olfr310B2RVZ1 332 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 A930018M24RikB7ZMY3 218 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Catsperg2C6KI89 1145 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Zfp651E9PZ11 729 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Pbx3O35317 434 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Snrpd1P62315 119 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Fam189a2Q4FZH1 290 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ino80dQ66JY2 873 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Slc20a2Q80UP8 656 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Fut11Q8BHC9 489 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Exoc3l1Q8BI71 739 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Lrrc66Q8K0B3 872 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 D8Ertd738eQ8R1F0 94 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 VillQ91YD6 859 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Uap1Q91YN5 522 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ecm29Q6PDI5 1840 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Tmem45a2B7ZWJ5 289 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 1700011I03RikE9PYL8 271 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Chrna9G3X8Z7 479 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Inpp5jP59644 1003 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 AxlQ00993 888 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 ZufspQ3T9Z9 577 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Atxn7l3bQ3UD01 97 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 VclQ64727 1066 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Q6DFW0 481 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Fam109aQ8BH49 266 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Tmtc3Q8BRH0 920 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Gpr61Q8C010 449 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Mettl3Q8C3P7 580 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ago3Q8CJF9 860 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 P3h4Q8K2B0 443 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Rps6kl1Q8R2S1 544 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Asz1Q8VD46 475 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ecrg4Q99LS0 148 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Spock2Q9ER58 423 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Nup50Q9JIH2 466 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Spag6Q9JLI7 507 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Slc25a13Q9QXX4 676 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 PrebQ9WUQ2 417 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Stau1Q9Z108 487 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 C87414E9PWI7 475 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Vmn2r39L7N2E5 861 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 MaptP10637 733 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Rpl7aP12970 266 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 InaP46660 501 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Yipf3Q3UDR8 347 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 H2-Q2Q4KN81 360 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Ndufaf2Q59J78 168 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 SpdyaQ5IBH7 310 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Slc30a9Q5IRJ6 567 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Mtmr12Q80TA6 747 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Trmt10aQ8C1Z8 328 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Pnpla8Q8K1N1 776 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Smg8Q8VE18 991 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Slc39a3Q99K24 317 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Trpd52l3Q9CQ14 231 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Cldnd1Q9CQX5 253 aa8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Habp4Q9JKS5 411 aaKnown RBP8.13□□□□□ -1.11
Lig3-201ENSMUST00000021039 Gm11239E9Q5Z9 360 aa8.12□□□□□ -1.11
Lig3-201ENSMUST00000021039 Gm8882E9Q7E4 283 aa8.12□□□□□ -1.11
Lig3-201ENSMUST00000021039 Gm11237F2Z3W5 360 aa8.12□□□□□ -1.11
Lig3-201ENSMUST00000021039 Gm11238F2Z478 360 aa8.12□□□□□ -1.11
Lig3-201ENSMUST00000021039 Zfp457L7N1X4 647 aa8.12□□□□□ -1.11
Lig3-201ENSMUST00000021039 Cyth2P63034 400 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms