RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Dnmt3aO88508 908 aaKnown RBP12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Adcy6Q01341 1165 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tespa1Q3U132 458 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nrg1Q6DR99 700 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zfp943Q6NZP4 507 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zfp759Q7M6X3 721 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Slc41a1Q8BJA2 512 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Prpf18Q8BM39 342 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cpsf7Q8BTV2 471 aaKnown RBP12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Samd4aQ8CBY1 711 aaKnown RBP12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Kiaa2013Q91X21 634 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pcdha6Q91Y14 946 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ssxb1Q9CPU1 170 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pgam1Q9DBJ1 254 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Racgap1Q9WVM1 628 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zbtb11G5E8B9 1050 aaKnown RBP12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Vmn2r44L7N2E1 861 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Mbl1P39039 239 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 NadkP58058 439 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Npr3P70180 536 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Olfml2bQ3V1G4 746 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Rap1gap2Q5SVL6 712 aaKnown RBP12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 MregQ6NVG5 214 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Rdh13Q8CEE7 334 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Plac9Q8K262 108 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pwp1Q99LL5 501 aaKnown RBP12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ampd2Q9DBT5 798 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zfp788E9Q980 884 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Vmn2r100E9QAZ9 850 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 EpoP07321 192 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Serpina3kP07759 418 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tmprss15P97435 1069 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nlrc4Q3UP24 1024 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Kctd21Q3URF8 260 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cep295nlQ497N6 533 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Wee2Q66JT0 555 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Q8BP99 230 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Brat1Q8C3R1 822 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ccdc63Q8CDV6 558 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cog4Q8R1U1 785 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Fbxw7Q8VBV4 629 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Chst7Q9EP78 484 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 TicrrQ8BQ33 1889 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm3752A6NAT4 150 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Adamts6D3Z1A5 1117 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm2237E9Q501 211 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm3591K7N6X2 186 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Bnc1O35914 961 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Alas2P08680 587 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm11437Q5QR91 290 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Armc12Q80X86 340 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nipa1Q8BHK1 323 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 UnkQ8BL48 810 aaKnown RBP12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 DseQ8BLI4 958 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 CtsqQ91ZF4 343 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Rxfp2Q91ZZ5 737 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Me2Q99KE1 589 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Acot13Q9CQR4 140 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Hormad1Q9D5T7 392 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cdkl2Q9QUK0 568 aa12.99□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Col1a1P11087 1453 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ssxb8B1AY40 170 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Kbtbd2G3X9X1 623 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Vmn2r19G5E8G4 854 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Hoxb8P09632 243 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cyp2a4P15392 494 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cyp2a5P20852 494 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gjb1P28230 283 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Aldh3a1P47739 453 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Igfbp4P47879 254 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cyp3a13Q64464 503 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Snx16Q8C080 344 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Adi1Q99JT9 179 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Atp6v1g1Q9CR51 118 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Sugt1Q9CX34 336 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 DtnaQ9D2N4 746 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gsdmdc1Q9D8T2 487 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 MecrQ9DCS3 373 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Cdh13Q9WTR5 714 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Akap17bA2A3V1 959 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Dennd5bA2RSQ0 1274 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Olfr456B2RT27 312 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 DgkdE9PUQ8 1220 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 TazI7HJS2 263 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 DldO08749 509 aaKnown RBP12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Inpp1P49442 396 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Aqp4P55088 323 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Psme3P61290 254 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Asprv1Q09PK2 339 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Kcnk9Q3LS21 402 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 GmpsQ3THK7 693 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Smpd4Q6ZPR5 823 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ppm1lQ8BHN0 360 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 OsgepQ8BWU5 335 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Anapc2Q8BZQ7 837 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Ube2q2Q8K2Z8 378 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Olfr458Q8VF80 313 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Olfr457Q8VGP5 313 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Prss23Q9D6X6 382 aa12.98□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Acox2Q9QXD1 681 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms