RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE4	YOR035C	FLP1	P03870	423 aa		4.7	□□□□□ -1.66
SHE4	YOR035C	AI1	P03875	834 aa		4.7	□□□□□ -1.66
SHE4	YOR035C	ASF1	P32447	279 aa		4.69	□□□□□ -1.66
SHE4	YOR035C	VPS35	P34110	944 aa		4.69	□□□□□ -1.66
SHE4	YOR035C	ALG14	P38242	237 aa		4.69	□□□□□ -1.66
SHE4	YOR035C	MGE1	P38523	228 aa		4.69	□□□□□ -1.66
SHE4	YOR035C	INP51	P40559	946 aa	Known RBP	4.69	□□□□□ -1.66
SHE4	YOR035C	CTR9	P89105	1077 aa		4.69	□□□□□ -1.66
SHE4	YOR035C	SOK2	P53438	785 aa	Predicted RBP	4.69	□□□□□ -1.66
SHE4	YOR035C	YNR014W	P53719	212 aa		4.69	□□□□□ -1.66
SHE4	YOR035C	COB	P00163	385 aa		4.68	□□□□□ -1.66
SHE4	YOR035C	RPT1	P33299	467 aa	Known RBP	4.68	□□□□□ -1.66
SHE4	YOR035C	MET1	P36150	593 aa		4.68	□□□□□ -1.66
SHE4	YOR035C	PGM2	P37012	569 aa	Known RBP	4.68	□□□□□ -1.66
SHE4	YOR035C	ATE1	P16639	503 aa		4.68	□□□□□ -1.66
SHE4	YOR035C	NAR1	P23503	491 aa	Known RBP	4.68	□□□□□ -1.66
SHE4	YOR035C	TFA2	P36145	328 aa		4.68	□□□□□ -1.66
SHE4	YOR035C	DAK2	P43550	591 aa		4.68	□□□□□ -1.66
SHE4	YOR035C	GIS4	Q04233	774 aa		4.68	□□□□□ -1.66
SHE4	YOR035C	OXR1	Q08952	273 aa		4.68	□□□□□ -1.66
SHE4	YOR035C	MON1	P53129	644 aa		4.67	□□□□□ -1.66
SHE4	YOR035C	BIO5	P53744	561 aa	Known RBP	4.67	□□□□□ -1.66
SHE4	YOR035C	THI72	Q08579	599 aa		4.67	□□□□□ -1.66
SHE4	YOR035C	GLO4	Q12320	285 aa		4.67	□□□□□ -1.66
SHE4	YOR035C	BOI2	P39969	1040 aa		4.67	□□□□□ -1.66
SHE4	YOR035C	SBE2	P42223	864 aa	Known RBP	4.67	□□□□□ -1.66
SHE4	YOR035C	YCS4	Q06156	1176 aa		4.67	□□□□□ -1.66
SHE4	YOR035C	SOG2	Q08817	791 aa		4.67	□□□□□ -1.66
SHE4	YOR035C	DUR3	P33413	735 aa		4.66	□□□□□ -1.66
SHE4	YOR035C	NEO1	P40527	1151 aa		4.66	□□□□□ -1.66
SHE4	YOR035C	MSH6	Q03834	1242 aa		4.66	□□□□□ -1.66
SHE4	YOR035C	NHA1	Q99271	985 aa		4.66	□□□□□ -1.66
SHE4	YOR035C	GIP2	P40036	548 aa		4.65	□□□□□ -1.66
SHE4	YOR035C	TED1	P40533	473 aa		4.65	□□□□□ -1.66
SHE4	YOR035C	LSB6	P42951	607 aa		4.65	□□□□□ -1.66
SHE4	YOR035C	YJR124C	P47159	448 aa		4.65	□□□□□ -1.66
SHE4	YOR035C	NUT1	P53114	1132 aa		4.65	□□□□□ -1.66
SHE4	YOR035C	NSG2	P53898	299 aa		4.65	□□□□□ -1.66
SHE4	YOR035C	RRP15	Q06511	250 aa	Predicted RBP	4.65	□□□□□ -1.66
SHE4	YOR035C	FET4	P40988	552 aa		4.65	□□□□□ -1.67
SHE4	YOR035C	DAL4	Q04895	635 aa		4.65	□□□□□ -1.67
SHE4	YOR035C	PRP40	P33203	583 aa	Known RBP	4.64	□□□□□ -1.67
SHE4	YOR035C	GUP1	P53154	560 aa		4.64	□□□□□ -1.67
SHE4	YOR035C	PMT7	Q06644	662 aa		4.64	□□□□□ -1.67
SHE4	YOR035C	SLP1	Q12232	587 aa		4.64	□□□□□ -1.67
SHE4	YOR035C	MCM5	P29496	775 aa	Known RBP	4.63	□□□□□ -1.67
SHE4	YOR035C	MDJ1	P35191	511 aa		4.63	□□□□□ -1.67
SHE4	YOR035C	AMN1	P38285	549 aa	Predicted RBP	4.63	□□□□□ -1.67
SHE4	YOR035C	RIM11	P38615	370 aa		4.63	□□□□□ -1.67
SHE4	YOR035C	YNR065C	P53751	1116 aa		4.63	□□□□□ -1.67
SHE4	YOR035C	CMR1	Q12510	522 aa	Known RBP	4.63	□□□□□ -1.67
SHE4	YOR035C	KAR2	P16474	682 aa	Known RBP	4.63	□□□□□ -1.67
SHE4	YOR035C	NPR1	P22211	790 aa		4.63	□□□□□ -1.67
SHE4	YOR035C	MCM2	P29469	868 aa		4.63	□□□□□ -1.67
SHE4	YOR035C	RVS167	P39743	482 aa	Known RBP	4.63	□□□□□ -1.67
SHE4	YOR035C	TOS4	Q06266	489 aa		4.63	□□□□□ -1.67
SHE4	YOR035C	SEC8	P32855	1065 aa		4.62	□□□□□ -1.67
SHE4	YOR035C	PAN5	P38787	379 aa		4.62	□□□□□ -1.67
SHE4	YOR035C	LEM3	P42838	414 aa		4.62	□□□□□ -1.67
SHE4	YOR035C	YJR107W	P47145	328 aa		4.62	□□□□□ -1.67
SHE4	YOR035C	OYE2	Q03558	400 aa	Known RBP	4.62	□□□□□ -1.67
SHE4	YOR035C	TDA6	Q06466	467 aa		4.62	□□□□□ -1.67
SHE4	YOR035C	YFL066C	P43538	392 aa		4.62	□□□□□ -1.67
SHE4	YOR035C	YAF9	P53930	226 aa		4.62	□□□□□ -1.67
SHE4	YOR035C	HAS1	Q03532	505 aa	Known RBP	4.62	□□□□□ -1.67
SHE4	YOR035C	HVG1	P0CE11	249 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	SAC7	P17121	654 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	FAA3	P39002	694 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	FYV10	P40492	516 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	SAP155	P43612	1002 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	RRM3	P38766	723 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	RPS26A	P39938	119 aa	Known RBP	4.61	□□□□□ -1.67
SHE4	YOR035C	RPS26B	P39939	119 aa	Known RBP	4.61	□□□□□ -1.67
SHE4	YOR035C	SPO71	Q03868	1245 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	PHM7	Q12252	991 aa		4.61	□□□□□ -1.67
SHE4	YOR035C	TY4B-P	A0A0B7P3V8	1104 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	UGA4	P32837	571 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	MCX1	P38323	520 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE4	YOR035C	TY4A-H	Q6Q5P6	413 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	HXK1	P04806	485 aa	Known RBP	4.6	□□□□□ -1.67
SHE4	YOR035C	PRP5	P21372	849 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE4	YOR035C	PEP7	P32609	515 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	SQT1	P35184	431 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	RSM26	P47141	266 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	YGR122W	P53272	402 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	SPR28	Q04921	423 aa		4.6	□□□□□ -1.67
SHE4	YOR035C	ULP1	Q02724	621 aa		4.59	□□□□□ -1.67
SHE4	YOR035C	HTS1	P07263	546 aa	Known RBP	4.58	□□□□□ -1.68
SHE4	YOR035C	SHU2	P38957	223 aa		4.58	□□□□□ -1.68
SHE4	YOR035C	SNU71	P53207	620 aa	Known RBP	4.58	□□□□□ -1.68
SHE4	YOR035C	YMR074C	Q04773	145 aa		4.58	□□□□□ -1.68
SHE4	YOR035C	ELG1	Q12050	791 aa		4.58	□□□□□ -1.68
SHE4	YOR035C	POL5	P39985	1022 aa	Known RBP	4.58	□□□□□ -1.68
SHE4	YOR035C	YPL109C	Q02981	657 aa		4.58	□□□□□ -1.68
SHE4	YOR035C	YPR053C	Q6Q5F3	151 aa		4.58	□□□□□ -1.68
SHE4	YOR035C	MRPS18	P42847	217 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	UTP22	P53254	1237 aa	Predicted RBP	4.57	□□□□□ -1.68
SHE4	YOR035C	PEX13	P80667	386 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	YMR187C	Q03236	431 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	ADI1	Q03677	179 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms