RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W GIP2P40036 548 aa3.23□□□□□ -1.89
CFT2YLR115W MNL2Q12205 849 aa3.23□□□□□ -1.89
CFT2YLR115W FUS1P11710 512 aa3.22□□□□□ -1.89
CFT2YLR115W SMC1P32908 1225 aa3.22□□□□□ -1.89
CFT2YLR115W TED1P40533 473 aa3.22□□□□□ -1.89
CFT2YLR115W LSB6P42951 607 aa3.22□□□□□ -1.89
CFT2YLR115W SOG2Q08817 791 aa3.22□□□□□ -1.89
CFT2YLR115W COBP00163 385 aa3.22□□□□□ -1.89
CFT2YLR115W PGM1P33401 570 aaKnown RBP3.22□□□□□ -1.89
CFT2YLR115W GEF1P37020 779 aa3.22□□□□□ -1.89
CFT2YLR115W TAT1P38085 619 aa3.22□□□□□ -1.89
CFT2YLR115W SOK2P53438 785 aaPredicted RBP3.22□□□□□ -1.89
CFT2YLR115W PYC2P32327 1180 aaKnown RBP3.21□□□□□ -1.9
CFT2YLR115W ACF4P47129 309 aa3.21□□□□□ -1.9
CFT2YLR115W RSC4Q02206 625 aa3.21□□□□□ -1.9
CFT2YLR115W YBR287WP38355 427 aa3.21□□□□□ -1.9
CFT2YLR115W MDJ2P42834 146 aa3.21□□□□□ -1.9
CFT2YLR115W YNR065CP53751 1116 aa3.21□□□□□ -1.9
CFT2YLR115W YPL034WQ03083 165 aa3.21□□□□□ -1.9
CFT2YLR115W TY1A-NL1Q12391 440 aaKnown RBP3.21□□□□□ -1.9
CFT2YLR115W SAC7P17121 654 aa3.2□□□□□ -1.9
CFT2YLR115W CDC3P32457 520 aaKnown RBP3.2□□□□□ -1.9
CFT2YLR115W SFA1P32771 386 aa3.2□□□□□ -1.9
CFT2YLR115W YJR124CP47159 448 aa3.2□□□□□ -1.9
CFT2YLR115W ARI1P53111 347 aaKnown RBP3.2□□□□□ -1.9
CFT2YLR115W GUP1P53154 560 aa3.2□□□□□ -1.9
CFT2YLR115W DUR3P33413 735 aa3.2□□□□□ -1.9
CFT2YLR115W PAN5P38787 379 aa3.2□□□□□ -1.9
CFT2YLR115W ERP5P38819 212 aa3.2□□□□□ -1.9
CFT2YLR115W POL5P39985 1022 aaKnown RBP3.2□□□□□ -1.9
CFT2YLR115W UFD2P54860 961 aa3.2□□□□□ -1.9
CFT2YLR115W TRS120Q04183 1289 aa3.2□□□□□ -1.9
CFT2YLR115W GLO4Q12320 285 aa3.2□□□□□ -1.9
CFT2YLR115W GPI13Q07830 1017 aa3.19□□□□□ -1.9
CFT2YLR115W FRT1Q99332 602 aa3.19□□□□□ -1.9
CFT2YLR115W LEM3P42838 414 aa3.18□□□□□ -1.9
CFT2YLR115W DSE4P53753 1117 aa3.18□□□□□ -1.9
CFT2YLR115W HAT1Q12341 374 aa3.18□□□□□ -1.9
CFT2YLR115W YBL113CQ7M4S9 792 aa3.18□□□□□ -1.9
CFT2YLR115W HAS1Q03532 505 aaKnown RBP3.18□□□□□ -1.9
CFT2YLR115W RIM11P38615 370 aa3.17□□□□□ -1.9
CFT2YLR115W YNL011CP53980 444 aa3.17□□□□□ -1.9
CFT2YLR115W CDC55Q00362 526 aa3.17□□□□□ -1.9
CFT2YLR115W SBP1P10080 294 aaKnown RBP3.16□□□□□ -1.9
CFT2YLR115W ERS1P17261 260 aa3.16□□□□□ -1.9
CFT2YLR115W PRP5P21372 849 aaPredicted RBP3.16□□□□□ -1.9
CFT2YLR115W GRS1P38088 690 aaKnown RBP3.16□□□□□ -1.9
CFT2YLR115W NCE103P53615 221 aa3.16□□□□□ -1.9
CFT2YLR115W NUT2Q06213 157 aa3.16□□□□□ -1.9
CFT2YLR115W CMR1Q12510 522 aaKnown RBP3.16□□□□□ -1.9
CFT2YLR115W MSH6Q03834 1242 aa3.16□□□□□ -1.9
CFT2YLR115W REC8Q12188 680 aa3.16□□□□□ -1.9
CFT2YLR115W NPR1P22211 790 aa3.15□□□□□ -1.9
CFT2YLR115W SAP155P43612 1002 aa3.15□□□□□ -1.9
CFT2YLR115W SPO71Q03868 1245 aa3.15□□□□□ -1.9
CFT2YLR115W BSC2Q05611 235 aa3.15□□□□□ -1.9
CFT2YLR115W RSC6P25632 483 aa3.15□□□□□ -1.91
CFT2YLR115W ELG1Q12050 791 aa3.15□□□□□ -1.91
CFT2YLR115W FLP1P03870 423 aa3.14□□□□□ -1.91
CFT2YLR115W NAM7P30771 971 aaKnown RBP3.14□□□□□ -1.91
CFT2YLR115W NEO1P40527 1151 aa3.14□□□□□ -1.91
CFT2YLR115W FET4P40988 552 aa3.14□□□□□ -1.91
CFT2YLR115W INP52P50942 1183 aa3.14□□□□□ -1.91
CFT2YLR115W YLR122CQ12312 125 aa3.14□□□□□ -1.91
CFT2YLR115W MAE1P36013 669 aaKnown RBP3.14□□□□□ -1.91
CFT2YLR115W SSF1P38789 453 aaPredicted RBP3.14□□□□□ -1.91
CFT2YLR115W NRD1P53617 575 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
CFT2YLR115W TRP3P00937 484 aa3.13□□□□□ -1.91
CFT2YLR115W HTS1P07263 546 aaKnown RBP3.13□□□□□ -1.91
CFT2YLR115W SAF1P38352 637 aa3.13□□□□□ -1.91
CFT2YLR115W YIG1Q08956 461 aa3.13□□□□□ -1.91
CFT2YLR115W NUT1P53114 1132 aa3.13□□□□□ -1.91
CFT2YLR115W ALO1P54783 526 aaKnown RBP3.13□□□□□ -1.91
CFT2YLR115W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
CFT2YLR115W INP54Q08227 384 aaKnown RBP3.13□□□□□ -1.91
CFT2YLR115W YKR073CP36153 106 aa3.12□□□□□ -1.91
CFT2YLR115W YHL050CP38721 697 aa3.12□□□□□ -1.91
CFT2YLR115W YHR219WP38900 624 aa3.12□□□□□ -1.91
CFT2YLR115W KIP3P53086 805 aaKnown RBP3.12□□□□□ -1.91
CFT2YLR115W AKR1P39010 764 aa3.12□□□□□ -1.91
CFT2YLR115W KAE1P36132 386 aa3.11□□□□□ -1.91
CFT2YLR115W YHL008CP38750 627 aa3.11□□□□□ -1.91
CFT2YLR115W WHI5Q12416 295 aa3.11□□□□□ -1.91
CFT2YLR115W MET4P32389 672 aa3.11□□□□□ -1.91
CFT2YLR115W GCV1P48015 400 aa3.11□□□□□ -1.91
CFT2YLR115W YAF9P53930 226 aa3.11□□□□□ -1.91
CFT2YLR115W PHO4P07270 312 aaKnown RBP3.1□□□□□ -1.91
CFT2YLR115W TY1A-LR4P0C2I8 440 aaKnown RBP3.1□□□□□ -1.91
CFT2YLR115W TY1A-DR6P0CX70 440 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-ER1P0CX71 440 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-LR2P0CX72 440 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-PLP0CX73 440 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-JR1P0CX74 440 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-LR3P0CX75 440 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-ML2P0CX76 440 aa3.1□□□□□ -1.91
CFT2YLR115W CHS2P14180 963 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-GR1Q12085 440 aa3.1□□□□□ -1.91
CFT2YLR115W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.1□□□□□ -1.91
CFT2YLR115W TY1A-OLQ92392 440 aaKnown RBP3.1□□□□□ -1.91
CFT2YLR115W COQ2P32378 372 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms