RNA–Protein interactions for RNA: YDR442W

YDR442W, Transcript of Dubious open reading frame, yeast

Gene YDR442W, Length 393 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR442W	YDR442W	IDI1	P15496	288 aa		4.27	□□□□□ -1.73
YDR442W	YDR442W	GAR1	P28007	205 aa	Known RBP	4.27	□□□□□ -1.73
YDR442W	YDR442W	PYC2	P32327	1180 aa	Known RBP	4.27	□□□□□ -1.73
YDR442W	YDR442W	RVS167	P39743	482 aa	Known RBP	4.27	□□□□□ -1.73
YDR442W	YDR442W	PPT1	P53043	513 aa		4.27	□□□□□ -1.73
YDR442W	YDR442W	MSH6	Q03834	1242 aa		4.27	□□□□□ -1.73
YDR442W	YDR442W	FUS1	P11710	512 aa		4.26	□□□□□ -1.73
YDR442W	YDR442W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
YDR442W	YDR442W	MSC7	P38694	644 aa		4.26	□□□□□ -1.73
YDR442W	YDR442W	RPS26A	P39938	119 aa	Known RBP	4.26	□□□□□ -1.73
YDR442W	YDR442W	RPS26B	P39939	119 aa	Known RBP	4.26	□□□□□ -1.73
YDR442W	YDR442W	LYS5	P50113	272 aa		4.26	□□□□□ -1.73
YDR442W	YDR442W	NUT1	P53114	1132 aa		4.26	□□□□□ -1.73
YDR442W	YDR442W	CTR9	P89105	1077 aa		4.26	□□□□□ -1.73
YDR442W	YDR442W	DAL4	Q04895	635 aa		4.26	□□□□□ -1.73
YDR442W	YDR442W	SYT1	Q06836	1226 aa		4.26	□□□□□ -1.73
YDR442W	YDR442W	HXK1	P04806	485 aa	Known RBP	4.25	□□□□□ -1.73
YDR442W	YDR442W	MCM2	P29469	868 aa		4.25	□□□□□ -1.73
YDR442W	YDR442W	PRP40	P33203	583 aa	Known RBP	4.25	□□□□□ -1.73
YDR442W	YDR442W	FYV10	P40492	516 aa		4.25	□□□□□ -1.73
YDR442W	YDR442W	TY1A-DR2	Q03964	440 aa	Known RBP	4.25	□□□□□ -1.73
YDR442W	YDR442W	ESF1	Q06344	628 aa	Known RBP	4.25	□□□□□ -1.73
YDR442W	YDR442W	PMT7	Q06644	662 aa		4.25	□□□□□ -1.73
YDR442W	YDR442W	MCD1	Q12158	566 aa		4.25	□□□□□ -1.73
YDR442W	YDR442W	COB	P00163	385 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	RAD2	P07276	1031 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	CYC8	P14922	966 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	PEP7	P32609	515 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	PRK1	P40494	810 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	INP51	P40559	946 aa	Known RBP	4.24	□□□□□ -1.73
YDR442W	YDR442W	MRPS18	P42847	217 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	SAP155	P43612	1002 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	YJL181W	P46987	611 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	SPR28	Q04921	423 aa		4.24	□□□□□ -1.73
YDR442W	YDR442W	EBP2	P36049	427 aa	Known RBP	4.23	□□□□□ -1.73
YDR442W	YDR442W	MON1	P53129	644 aa		4.23	□□□□□ -1.73
YDR442W	YDR442W	BIO5	P53744	561 aa	Known RBP	4.23	□□□□□ -1.73
YDR442W	YDR442W	PRP5	P21372	849 aa	Predicted RBP	4.22	□□□□□ -1.73
YDR442W	YDR442W	NPR1	P22211	790 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	PRE9	P23638	258 aa	Known RBP	4.22	□□□□□ -1.73
YDR442W	YDR442W	MCM5	P29496	775 aa	Known RBP	4.22	□□□□□ -1.73
YDR442W	YDR442W	RIM11	P38615	370 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	SHU2	P38957	223 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	FAA3	P39002	694 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	LEM3	P42838	414 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	YRB30	P53107	440 aa	Predicted RBP	4.22	□□□□□ -1.73
YDR442W	YDR442W	GUP1	P53154	560 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	ALD3	P54114	506 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	ULP1	Q02724	621 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	ADI1	Q03677	179 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	JIP5	Q06214	492 aa	Predicted RBP	4.22	□□□□□ -1.73
YDR442W	YDR442W	TOS4	Q06266	489 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	GLO4	Q12320	285 aa		4.22	□□□□□ -1.73
YDR442W	YDR442W	CLN2	P20438	545 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	KNS1	P32350	737 aa	Predicted RBP	4.21	□□□□□ -1.74
YDR442W	YDR442W	DUR3	P33413	735 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	SQT1	P35184	431 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	MNR2	P35724	969 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	MAD1	P40957	749 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	YAF9	P53930	226 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	YPL109C	Q02981	657 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	SOG2	Q08817	791 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	YDL176W	Q12027	708 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	DPH6	Q12429	685 aa		4.21	□□□□□ -1.74
YDR442W	YDR442W	CMR1	Q12510	522 aa	Known RBP	4.21	□□□□□ -1.74
YDR442W	YDR442W	GPM1	P00950	247 aa	Known RBP	4.2	□□□□□ -1.74
YDR442W	YDR442W	PDC5	P16467	563 aa	Known RBP	4.2	□□□□□ -1.74
YDR442W	YDR442W	PET112	P33893	541 aa		4.2	□□□□□ -1.74
YDR442W	YDR442W	CAB3	P36076	571 aa		4.2	□□□□□ -1.74
YDR442W	YDR442W	JJJ3	P47138	172 aa		4.2	□□□□□ -1.74
YDR442W	YDR442W	RSM26	P47141	266 aa		4.2	□□□□□ -1.74
YDR442W	YDR442W	YJR124C	P47159	448 aa		4.2	□□□□□ -1.74
YDR442W	YDR442W	SLP1	Q12232	587 aa		4.2	□□□□□ -1.74
YDR442W	YDR442W	MRP10	O75012	95 aa		4.19	□□□□□ -1.74
YDR442W	YDR442W	HVG1	P0CE11	249 aa		4.19	□□□□□ -1.74
YDR442W	YDR442W	TFA2	P36145	328 aa		4.19	□□□□□ -1.74
YDR442W	YDR442W	AMN1	P38285	549 aa	Predicted RBP	4.19	□□□□□ -1.74
YDR442W	YDR442W	FET4	P40988	552 aa		4.19	□□□□□ -1.74
YDR442W	YDR442W	YNR065C	P53751	1116 aa		4.19	□□□□□ -1.74
YDR442W	YDR442W	UGA4	P32837	571 aa		4.18	□□□□□ -1.74
YDR442W	YDR442W	YKL077W	P36081	392 aa		4.18	□□□□□ -1.74
YDR442W	YDR442W	NEO1	P40527	1151 aa		4.18	□□□□□ -1.74
YDR442W	YDR442W	LSB6	P42951	607 aa		4.18	□□□□□ -1.74
YDR442W	YDR442W	YGR035C	P53222	116 aa		4.18	□□□□□ -1.74
YDR442W	YDR442W	NOG1	Q02892	647 aa	Known RBP	4.18	□□□□□ -1.74
YDR442W	YDR442W	HPF1	Q05164	967 aa		4.18	□□□□□ -1.74
YDR442W	YDR442W	PIN2	Q12057	282 aa		4.18	□□□□□ -1.74
YDR442W	YDR442W	TAF13	P11747	167 aa		4.17	□□□□□ -1.74
YDR442W	YDR442W	GIP2	P40036	548 aa		4.17	□□□□□ -1.74
YDR442W	YDR442W	SOK2	P53438	785 aa	Predicted RBP	4.17	□□□□□ -1.74
YDR442W	YDR442W	PEX13	P80667	386 aa		4.17	□□□□□ -1.74
YDR442W	YDR442W	VPS16	Q03308	798 aa		4.17	□□□□□ -1.74
YDR442W	YDR442W	SPO71	Q03868	1245 aa		4.17	□□□□□ -1.74
YDR442W	YDR442W	GIS4	Q04233	774 aa		4.17	□□□□□ -1.74
YDR442W	YDR442W	HTS1	P07263	546 aa	Known RBP	4.16	□□□□□ -1.74
YDR442W	YDR442W	NAR1	P23503	491 aa	Known RBP	4.16	□□□□□ -1.74
YDR442W	YDR442W	MSH3	P25336	1018 aa		4.16	□□□□□ -1.74
YDR442W	YDR442W	ALG14	P38242	237 aa		4.16	□□□□□ -1.74
YDR442W	YDR442W	PEX28	P38848	579 aa		4.16	□□□□□ -1.74
YDR442W	YDR442W	PIC2	P40035	300 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 88.5 ms