RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	KDM6B	O15054	1643 aa		10.14	□□□□□ -0.79
CASC19-238	ENST00000641523	USP17L8	P0C7I0	530 aa		10.14	□□□□□ -0.79
CASC19-238	ENST00000641523	FAM205C	A6NFA0	338 aa		10.13	□□□□□ -0.79
CASC19-238	ENST00000641523	PBX2	P40425	430 aa		10.13	□□□□□ -0.79
CASC19-238	ENST00000641523	TEX14	Q8IWB6	1497 aa		10.13	□□□□□ -0.79
CASC19-238	ENST00000641523	EPRS	P07814	1512 aa	Known RBP	10.13	□□□□□ -0.79
CASC19-238	ENST00000641523	ABL2	P42684	1182 aa		10.12	□□□□□ -0.79
CASC19-238	ENST00000641523	SLF2	Q8IX21	1173 aa		10.12	□□□□□ -0.79
CASC19-238	ENST00000641523	ZNF687	Q8N1G0	1237 aa		10.12	□□□□□ -0.79
CASC19-238	ENST00000641523	WDR7	Q9Y4E6	1490 aa		10.12	□□□□□ -0.79
CASC19-238	ENST00000641523	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.11	□□□□□ -0.79
CASC19-238	ENST00000641523	ABCA8	O94911	1581 aa		10.11	□□□□□ -0.79
CASC19-238	ENST00000641523	FUT2	Q10981	343 aa		10.11	□□□□□ -0.79
CASC19-238	ENST00000641523	TBC1D2B	Q9UPU7	963 aa		10.11	□□□□□ -0.79
CASC19-238	ENST00000641523	RNF40	O75150	1001 aa		10.1	□□□□□ -0.79
CASC19-238	ENST00000641523	CFH	P08603	1231 aa		10.1	□□□□□ -0.79
CASC19-238	ENST00000641523	SLC4A3	P48751	1232 aa		10.1	□□□□□ -0.79
CASC19-238	ENST00000641523	CTDSPL2	Q05D32	466 aa		10.09	□□□□□ -0.79
CASC19-238	ENST00000641523	TSPOAP1	O95153	1857 aa		10.09	□□□□□ -0.79
CASC19-238	ENST00000641523	MTMR2	Q13614	643 aa		10.09	□□□□□ -0.79
CASC19-238	ENST00000641523	LAPTM4B	Q86VI4	370 aa		10.09	□□□□□ -0.79
CASC19-238	ENST00000641523	POTEB3	A0JP26	581 aa		10.08	□□□□□ -0.8
CASC19-238	ENST00000641523	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.08	□□□□□ -0.8
CASC19-238	ENST00000641523	SOCS7	O14512	581 aa		10.08	□□□□□ -0.8
CASC19-238	ENST00000641523	POTEB	Q6S5H4	581 aa		10.08	□□□□□ -0.8
CASC19-238	ENST00000641523	CCDC97	Q96F63	343 aa	Predicted RBP	10.08	□□□□□ -0.8
CASC19-238	ENST00000641523	NBPF3	Q9H094	633 aa		10.08	□□□□□ -0.8
CASC19-238	ENST00000641523	PRM3	Q9NNZ6	103 aa		10.08	□□□□□ -0.8
CASC19-238	ENST00000641523	MAP3K4	Q9Y6R4	1608 aa		10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	C6orf229	H3BNL8	230 aa		10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	GRIPAP1	Q4V328	841 aa		10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	TSC1	Q92574	1164 aa		10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	SYMPK	Q92797	1274 aa	Known RBP	10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	GJD4	Q96KN9	370 aa	Predicted RBP	10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	ZFR	Q96KR1	1074 aa	Known RBP	10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	SERPINA10	Q9UK55	444 aa		10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	SAMD9	Q5K651	1589 aa		10.07	□□□□□ -0.8
CASC19-238	ENST00000641523	CFAP99	D6REC4	459 aa		10.06	□□□□□ -0.8
CASC19-238	ENST00000641523	HMX1	Q9NP08	348 aa	Predicted RBP	10.06	□□□□□ -0.8
CASC19-238	ENST00000641523	KIF21B	O75037	1637 aa		10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	ATP6V1A	P38606	617 aa		10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	WWC1	Q8IX03	1113 aa		10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	FAM163A	Q96GL9	167 aa	Predicted RBP	10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	POM121C	A8CG34	1229 aa		10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	CD109	Q6YHK3	1445 aa		10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	LRRN4	Q8WUT4	740 aa		10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	HS3ST6	Q96QI5	342 aa		10.05	□□□□□ -0.8
CASC19-238	ENST00000641523	PPRC1	Q5VV67	1664 aa	Known RBP	10.04	□□□□□ -0.8
CASC19-238	ENST00000641523	EFCAB5	A4FU69	1503 aa		10.04	□□□□□ -0.8
CASC19-238	ENST00000641523	MAGI3	Q5TCQ9	1506 aa		10.04	□□□□□ -0.8
CASC19-238	ENST00000641523	MRPL50	Q8N5N7	158 aa	Known RBP	10.04	□□□□□ -0.8
CASC19-238	ENST00000641523	HELB	Q8NG08	1087 aa	Predicted RBP	10.04	□□□□□ -0.8
CASC19-238	ENST00000641523	CFAP43	Q8NDM7	1665 aa		10.03	□□□□□ -0.8
CASC19-238	ENST00000641523	TK2	O00142	265 aa		10.03	□□□□□ -0.8
CASC19-238	ENST00000641523	TRIM34	Q9BYJ4	488 aa		10.03	□□□□□ -0.8
CASC19-238	ENST00000641523	NDUFB9	Q9Y6M9	179 aa		10.03	□□□□□ -0.8
CASC19-238	ENST00000641523	PUS10	Q3MIT2	529 aa	Known RBP	10.02	□□□□□ -0.81
CASC19-238	ENST00000641523	KMT5B	Q4FZB7	885 aa		10.02	□□□□□ -0.81
CASC19-238	ENST00000641523	ATP10B	O94823	1461 aa		10.02	□□□□□ -0.81
CASC19-238	ENST00000641523	RAPGEF6	Q8TEU7	1601 aa		10.02	□□□□□ -0.81
CASC19-238	ENST00000641523	IRF5	Q13568	498 aa		10.01	□□□□□ -0.81
CASC19-238	ENST00000641523	PHLDB1	Q86UU1	1377 aa		10.01	□□□□□ -0.81
CASC19-238	ENST00000641523	MORN1	Q5T089	497 aa		10.01	□□□□□ -0.81
CASC19-238	ENST00000641523	ADGRD1	Q6QNK2	874 aa		10.01	□□□□□ -0.81
CASC19-238	ENST00000641523	PRR7	Q8TB68	274 aa		10.01	□□□□□ -0.81
CASC19-238	ENST00000641523	LRCH3	Q96II8	777 aa		10.01	□□□□□ -0.81
CASC19-238	ENST00000641523	CALR3	Q96L12	384 aa	Known RBP	10.01	□□□□□ -0.81
CASC19-238	ENST00000641523	TRIM26	Q12899	539 aa	Predicted RBP	10	□□□□□ -0.81
CASC19-238	ENST00000641523	EPS8L1	Q8TE68	723 aa		10	□□□□□ -0.81
CASC19-238	ENST00000641523	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10	□□□□□ -0.81
CASC19-238	ENST00000641523	FHOD3	Q2V2M9	1422 aa		10	□□□□□ -0.81
CASC19-238	ENST00000641523	LSM11	P83369	360 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
CASC19-238	ENST00000641523	GLMN	Q92990	594 aa		9.99	□□□□□ -0.81
CASC19-238	ENST00000641523	SLC27A5	Q9Y2P5	690 aa		9.99	□□□□□ -0.81
CASC19-238	ENST00000641523	ACTN4	O43707	911 aa	Known RBP	9.98	□□□□□ -0.81
CASC19-238	ENST00000641523	GPR37L1	O60883	481 aa		9.98	□□□□□ -0.81
CASC19-238	ENST00000641523	NUP153	P49790	1475 aa	Known RBP	9.98	□□□□□ -0.81
CASC19-238	ENST00000641523	COL17A1	Q9UMD9	1497 aa	Predicted RBP	9.98	□□□□□ -0.81
CASC19-238	ENST00000641523	NPM2	Q86SE8	214 aa	Known RBP	9.97	□□□□□ -0.81
CASC19-238	ENST00000641523	FMN1	Q68DA7	1419 aa		9.97	□□□□□ -0.81
CASC19-238	ENST00000641523	ABCA9	Q8IUA7	1624 aa		9.97	□□□□□ -0.81
CASC19-238	ENST00000641523	PLEKHD1	A6NEE1	506 aa		9.97	□□□□□ -0.81
CASC19-238	ENST00000641523	PER1	O15534	1290 aa	Predicted RBP	9.97	□□□□□ -0.81
CASC19-238	ENST00000641523	HR	O43593	1189 aa		9.97	□□□□□ -0.81
CASC19-238	ENST00000641523	PDIA4	P13667	645 aa	Known RBP	9.96	□□□□□ -0.82
CASC19-238	ENST00000641523	RETREG3	Q86VR2	466 aa		9.96	□□□□□ -0.82
CASC19-238	ENST00000641523	ARAP3	Q8WWN8	1544 aa		9.96	□□□□□ -0.82
CASC19-238	ENST00000641523	NEO1	Q92859	1461 aa		9.95	□□□□□ -0.82
CASC19-238	ENST00000641523	NR6A1	Q15406	480 aa		9.95	□□□□□ -0.82
CASC19-238	ENST00000641523	HDGFL1	Q5TGJ6	251 aa		9.95	□□□□□ -0.82
CASC19-238	ENST00000641523	GOLGA8CP	A6NN73	597 aa		9.94	□□□□□ -0.82
CASC19-238	ENST00000641523	VAC14	Q08AM6	782 aa		9.94	□□□□□ -0.82
CASC19-238	ENST00000641523	ANKRD13D	Q6ZTN6	518 aa		9.94	□□□□□ -0.82
CASC19-238	ENST00000641523	ADAMTS19	Q8TE59	1207 aa		9.94	□□□□□ -0.82
CASC19-238	ENST00000641523	NECTIN2	Q92692	538 aa		9.94	□□□□□ -0.82
CASC19-238	ENST00000641523	ADGRL1	O94910	1474 aa		9.94	□□□□□ -0.82
CASC19-238	ENST00000641523	PPP4C	P60510	307 aa		9.93	□□□□□ -0.82
CASC19-238	ENST00000641523	WASHC4	Q2M389	1173 aa		9.93	□□□□□ -0.82
CASC19-238	ENST00000641523		Q3C1V9	767 aa		9.93	□□□□□ -0.82
CASC19-238	ENST00000641523	RNF19B	Q6ZMZ0	732 aa		9.93	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms