RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 CYP4X1Q8N118 509 aa11.53□□□□□ -0.56
CASC19-227ENST00000641411 FMN1Q68DA7 1419 aa11.52□□□□□ -0.56
CASC19-227ENST00000641411 RRBP1Q9P2E9 1410 aaKnown RBP11.52□□□□□ -0.56
CASC19-227ENST00000641411 ERCC6Q03468 1493 aa11.52□□□□□ -0.56
CASC19-227ENST00000641411 DACH1Q9UI36 760 aa11.52□□□□□ -0.57
CASC19-227ENST00000641411 CASKIN1Q8WXD9 1431 aa11.52□□□□□ -0.57
CASC19-227ENST00000641411 PCF11O94913 1555 aaKnown RBP11.51□□□□□ -0.57
CASC19-227ENST00000641411 WNT7AO00755 349 aa11.51□□□□□ -0.57
CASC19-227ENST00000641411 IRF6O14896 467 aa11.51□□□□□ -0.57
CASC19-227ENST00000641411 DXOO77932 396 aaKnown RBP11.51□□□□□ -0.57
CASC19-227ENST00000641411 KDM4AO75164 1064 aa11.5□□□□□ -0.57
CASC19-227ENST00000641411 TRIM32Q13049 653 aa11.5□□□□□ -0.57
CASC19-227ENST00000641411 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
CASC19-227ENST00000641411 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
CASC19-227ENST00000641411 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
CASC19-227ENST00000641411 IQGAP2Q13576 1575 aa11.49□□□□□ -0.57
CASC19-227ENST00000641411 AXIN1O15169 862 aa11.48□□□□□ -0.57
CASC19-227ENST00000641411 USP46P62068 366 aa11.48□□□□□ -0.57
CASC19-227ENST00000641411 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
CASC19-227ENST00000641411 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
CASC19-227ENST00000641411 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
CASC19-227ENST00000641411 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
CASC19-227ENST00000641411 SNAPC4Q5SXM2 1469 aa11.47□□□□□ -0.57
CASC19-227ENST00000641411 MINK1Q8N4C8 1332 aaPredicted RBP11.47□□□□□ -0.57
CASC19-227ENST00000641411 RANGAP1P46060 587 aaPredicted RBP11.47□□□□□ -0.57
CASC19-227ENST00000641411 FHOD3Q2V2M9 1422 aa11.46□□□□□ -0.57
CASC19-227ENST00000641411 SMPD1P17405 629 aa11.46□□□□□ -0.57
CASC19-227ENST00000641411 HAP1P54257 671 aaPredicted RBP11.46□□□□□ -0.57
CASC19-227ENST00000641411 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
CASC19-227ENST00000641411 SNIP1Q8TAD8 396 aaKnown RBP11.45□□□□□ -0.58
CASC19-227ENST00000641411 GMPR2Q9P2T1 348 aaKnown RBP11.45□□□□□ -0.58
CASC19-227ENST00000641411 HOXA2O43364 376 aa11.44□□□□□ -0.58
CASC19-227ENST00000641411 MDM2Q00987 491 aaPredicted RBP11.44□□□□□ -0.58
CASC19-227ENST00000641411 KANK4Q5T7N3 995 aaPredicted RBP11.44□□□□□ -0.58
CASC19-227ENST00000641411 HLA-CQ95604 372 aa11.44□□□□□ -0.58
CASC19-227ENST00000641411 KIAA0586Q9BVV6 1533 aa11.44□□□□□ -0.58
CASC19-227ENST00000641411 TTC24A2A3L6 582 aaPredicted RBP11.43□□□□□ -0.58
CASC19-227ENST00000641411 MRGPRX2Q96LB1 330 aa11.43□□□□□ -0.58
CASC19-227ENST00000641411 GRIN2AQ12879 1464 aa11.42□□□□□ -0.58
CASC19-227ENST00000641411 CCNB3Q8WWL7 1395 aa11.41□□□□□ -0.58
CASC19-227ENST00000641411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
CASC19-227ENST00000641411 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
CASC19-227ENST00000641411 CCDC18Q5T9S5 1454 aa11.41□□□□□ -0.58
CASC19-227ENST00000641411 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
CASC19-227ENST00000641411 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
CASC19-227ENST00000641411 TTBK1Q5TCY1 1321 aaPredicted RBP11.4□□□□□ -0.58
CASC19-227ENST00000641411 HECW1Q76N89 1606 aa11.4□□□□□ -0.58
CASC19-227ENST00000641411 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
CASC19-227ENST00000641411 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
CASC19-227ENST00000641411 WNT7BP56706 349 aa11.39□□□□□ -0.59
CASC19-227ENST00000641411 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
CASC19-227ENST00000641411 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
CASC19-227ENST00000641411 CLSPNQ9HAW4 1339 aa11.38□□□□□ -0.59
CASC19-227ENST00000641411 J3QL48 77 aa11.38□□□□□ -0.59
CASC19-227ENST00000641411 TULP1O00294 542 aaPredicted RBP11.38□□□□□ -0.59
CASC19-227ENST00000641411 SKOR1P84550 965 aa11.38□□□□□ -0.59
CASC19-227ENST00000641411 EHBP1L1Q8N3D4 1523 aa11.38□□□□□ -0.59
CASC19-227ENST00000641411 LRRIQ1Q96JM4 1722 aa11.38□□□□□ -0.59
CASC19-227ENST00000641411 CLCN1P35523 988 aa11.37□□□□□ -0.59
CASC19-227ENST00000641411 KIAA0556O60303 1618 aa11.37□□□□□ -0.59
CASC19-227ENST00000641411 NUP160Q12769 1436 aa11.36□□□□□ -0.59
CASC19-227ENST00000641411 JUNDP17535 347 aa11.36□□□□□ -0.59
CASC19-227ENST00000641411 NFX1Q12986 1120 aaKnown RBP11.36□□□□□ -0.59
CASC19-227ENST00000641411 ATP13A2Q9NQ11 1180 aa11.36□□□□□ -0.59
CASC19-227ENST00000641411 GUCA2AQ02747 115 aa11.35□□□□□ -0.59
CASC19-227ENST00000641411 VSIG10Q8N0Z9 540 aa11.35□□□□□ -0.59
CASC19-227ENST00000641411 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
CASC19-227ENST00000641411 SUPT6HQ7KZ85 1726 aaKnown RBP11.34□□□□□ -0.59
CASC19-227ENST00000641411 ARHGEF11O15085 1522 aa11.34□□□□□ -0.59
CASC19-227ENST00000641411 DISP1Q96F81 1524 aa11.34□□□□□ -0.59
CASC19-227ENST00000641411 CEP170Q5SW79 1584 aa11.33□□□□□ -0.6
CASC19-227ENST00000641411 PHLDB1Q86UU1 1377 aa11.33□□□□□ -0.6
CASC19-227ENST00000641411 WFS1O76024 890 aa11.33□□□□□ -0.6
CASC19-227ENST00000641411 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
CASC19-227ENST00000641411 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
CASC19-227ENST00000641411 HPS1Q92902 700 aa11.32□□□□□ -0.6
CASC19-227ENST00000641411 TRIM47Q96LD4 638 aa11.32□□□□□ -0.6
CASC19-227ENST00000641411 SYMPKQ92797 1274 aaKnown RBP11.31□□□□□ -0.6
CASC19-227ENST00000641411 MTUS2Q5JR59 1369 aa11.3□□□□□ -0.6
CASC19-227ENST00000641411 WIPF1O43516 503 aa11.3□□□□□ -0.6
CASC19-227ENST00000641411 EPRSP07814 1512 aaKnown RBP11.3□□□□□ -0.6
CASC19-227ENST00000641411 FGD6Q6ZV73 1430 aa11.29□□□□□ -0.6
CASC19-227ENST00000641411 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
CASC19-227ENST00000641411 PCDHGC3Q9UN70 934 aa11.29□□□□□ -0.6
CASC19-227ENST00000641411 RAPGEF6Q8TEU7 1601 aa11.28□□□□□ -0.6
CASC19-227ENST00000641411 SIAH2O43255 324 aa11.28□□□□□ -0.6
CASC19-227ENST00000641411 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
CASC19-227ENST00000641411 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
CASC19-227ENST00000641411 NUDT12Q9BQG2 462 aa11.28□□□□□ -0.6
CASC19-227ENST00000641411 MYOM3Q5VTT5 1437 aa11.27□□□□□ -0.6
CASC19-227ENST00000641411 NCOA2Q15596 1464 aa11.27□□□□□ -0.6
CASC19-227ENST00000641411 LCE2CQ5TA81 110 aa11.27□□□□□ -0.61
CASC19-227ENST00000641411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
CASC19-227ENST00000641411 NUTM1Q86Y26 1132 aa11.27□□□□□ -0.61
CASC19-227ENST00000641411 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
CASC19-227ENST00000641411 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
CASC19-227ENST00000641411 DHX57Q6P158 1386 aaKnown RBP11.26□□□□□ -0.61
CASC19-227ENST00000641411 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
CASC19-227ENST00000641411 FDX1P10109 184 aa11.25□□□□□ -0.61
CASC19-227ENST00000641411 KIFC2Q96AC6 838 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms