RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 ZMIZ1Q9ULJ6 1067 aa10.95□□□□□ -0.66
SCARB2-224ENST00000640880 GNEQ9Y223 722 aaKnown RBP10.95□□□□□ -0.66
SCARB2-224ENST00000640880 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
SCARB2-224ENST00000640880 USP17L3A6NCW0 530 aa10.94□□□□□ -0.66
SCARB2-224ENST00000640880 USP17L4A6NCW7 530 aa10.94□□□□□ -0.66
SCARB2-224ENST00000640880 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
SCARB2-224ENST00000640880 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
SCARB2-224ENST00000640880 USP17L1Q7RTZ2 530 aa10.94□□□□□ -0.66
SCARB2-224ENST00000640880 NFATC2IPQ8NCF5 419 aa10.94□□□□□ -0.66
SCARB2-224ENST00000640880 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
SCARB2-224ENST00000640880 FKBPLQ9UIM3 349 aa10.94□□□□□ -0.66
SCARB2-224ENST00000640880 SKIP12755 728 aa10.93□□□□□ -0.66
SCARB2-224ENST00000640880 RNF19BQ6ZMZ0 732 aa10.93□□□□□ -0.66
SCARB2-224ENST00000640880 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
SCARB2-224ENST00000640880 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
SCARB2-224ENST00000640880 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
SCARB2-224ENST00000640880 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
SCARB2-224ENST00000640880 ZFRQ96KR1 1074 aaKnown RBP10.92□□□□□ -0.66
SCARB2-224ENST00000640880 ERBB3P21860 1342 aa10.91□□□□□ -0.66
SCARB2-224ENST00000640880 BLOC1S3Q6QNY0 202 aa10.91□□□□□ -0.66
SCARB2-224ENST00000640880 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
SCARB2-224ENST00000640880 USB1Q9BQ65 265 aaKnown RBP10.9□□□□□ -0.66
SCARB2-224ENST00000640880 ZC3H4Q9UPT8 1303 aaKnown RBP10.89□□□□□ -0.67
SCARB2-224ENST00000640880 F12P00748 615 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-224ENST00000640880 DEPDC4Q8N2C3 294 aa10.89□□□□□ -0.67
SCARB2-224ENST00000640880 FAM174AQ8TBP5 190 aa10.89□□□□□ -0.67
SCARB2-224ENST00000640880 CCER1Q8TC90 406 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-224ENST00000640880 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
SCARB2-224ENST00000640880 MAP10Q9P2G4 905 aa10.89□□□□□ -0.67
SCARB2-224ENST00000640880 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
SCARB2-224ENST00000640880 PBX2P40425 430 aa10.88□□□□□ -0.67
SCARB2-224ENST00000640880 LRCH3Q96II8 777 aa10.88□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L15C9J2P7 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L10C9JJH3 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L13C9JLJ4 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L11C9JVI0 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L21D6R901 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L18D6R9N7 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L22D6RA61 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L17D6RBQ6 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L19D6RCP7 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L20D6RJB6 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 USP17L24Q0WX57 530 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
SCARB2-224ENST00000640880 FAM196BA6NMK8 535 aa10.86□□□□□ -0.67
SCARB2-224ENST00000640880 BHMG1C9JSJ3 638 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-224ENST00000640880 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
SCARB2-224ENST00000640880 PHLDB3Q6NSJ2 640 aa10.86□□□□□ -0.67
SCARB2-224ENST00000640880 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
SCARB2-224ENST00000640880 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
SCARB2-224ENST00000640880 MKRN1Q9UHC7 482 aaKnown RBP10.86□□□□□ -0.67
SCARB2-224ENST00000640880 JUNDP17535 347 aa10.85□□□□□ -0.67
SCARB2-224ENST00000640880 CTHP32929 405 aa10.85□□□□□ -0.67
SCARB2-224ENST00000640880 PTPRNQ16849 979 aa10.85□□□□□ -0.67
SCARB2-224ENST00000640880 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.85□□□□□ -0.67
SCARB2-224ENST00000640880 SLFNL1Q499Z3 407 aa10.84□□□□□ -0.67
SCARB2-224ENST00000640880 LARP1Q6PKG0 1096 aaKnown RBP10.84□□□□□ -0.67
SCARB2-224ENST00000640880 MRPL50Q8N5N7 158 aaKnown RBP10.84□□□□□ -0.67
SCARB2-224ENST00000640880 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
SCARB2-224ENST00000640880 FMNL1O95466 1100 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-224ENST00000640880 RASA1P20936 1047 aa10.83□□□□□ -0.68
SCARB2-224ENST00000640880 NCOA4Q13772 614 aa10.83□□□□□ -0.68
SCARB2-224ENST00000640880 UNC13AQ9UPW8 1703 aa10.83□□□□□ -0.68
SCARB2-224ENST00000640880 SSFA2P28290 1259 aa10.82□□□□□ -0.68
SCARB2-224ENST00000640880 CEP126Q9P2H0 1117 aa10.82□□□□□ -0.68
SCARB2-224ENST00000640880 ATP5J2-PTCD1G3V325 749 aa10.81□□□□□ -0.68
SCARB2-224ENST00000640880 ARID4AP29374 1257 aaPredicted RBP10.81□□□□□ -0.68
SCARB2-224ENST00000640880 PTK7Q13308 1070 aa10.81□□□□□ -0.68
SCARB2-224ENST00000640880 RNF135Q8IUD6 432 aa10.81□□□□□ -0.68
SCARB2-224ENST00000640880 SCUBE3Q8IX30 993 aa10.81□□□□□ -0.68
SCARB2-224ENST00000640880 FAM200AQ8TCP9 573 aa10.81□□□□□ -0.68
SCARB2-224ENST00000640880 SLAIN2Q9P270 581 aa10.81□□□□□ -0.68
SCARB2-224ENST00000640880 PCDHB9Q9Y5E1 797 aa10.81□□□□□ -0.68
SCARB2-224ENST00000640880 EMP3P54852 163 aa10.8□□□□□ -0.68
SCARB2-224ENST00000640880 PTK2Q05397 1052 aa10.8□□□□□ -0.68
SCARB2-224ENST00000640880 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
SCARB2-224ENST00000640880 THAP11Q96EK4 314 aa10.8□□□□□ -0.68
SCARB2-224ENST00000640880 GPSM3Q9Y4H4 160 aa10.8□□□□□ -0.68
SCARB2-224ENST00000640880 NR1I2O75469 434 aa10.79□□□□□ -0.68
SCARB2-224ENST00000640880 PLPP7Q8NBV4 271 aa10.79□□□□□ -0.68
SCARB2-224ENST00000640880 CLP1Q92989 425 aaKnown RBP10.79□□□□□ -0.68
SCARB2-224ENST00000640880 TK2O00142 265 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 IGSF3O75054 1194 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 CCNYL3P0C7X3 344 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 APLP1P51693 650 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 FAM69CQ0P6D2 419 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
SCARB2-224ENST00000640880 PCDHB3Q9Y5E6 796 aa10.78□□□□□ -0.68
SCARB2-224ENST00000640880 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.69
SCARB2-224ENST00000640880 PPP4CP60510 307 aa10.77□□□□□ -0.69
SCARB2-224ENST00000640880 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.69
SCARB2-224ENST00000640880 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
SCARB2-224ENST00000640880 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.69
SCARB2-224ENST00000640880 OCSTAMPQ9BR26 566 aa10.77□□□□□ -0.69
SCARB2-224ENST00000640880 LZTS3O60299 673 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-224ENST00000640880 ATP2B4P23634 1241 aa10.76□□□□□ -0.69
SCARB2-224ENST00000640880 KCNH2Q12809 1159 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms