RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 MPHOSPH10O00566 681 aaKnown RBP9.88□□□□□ -0.83
NECAP1-227ENST00000640648 SUDS3Q9H7L9 328 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-227ENST00000640648 REC8O95072 547 aa9.88□□□□□ -0.83
NECAP1-227ENST00000640648 MINK1Q8N4C8 1332 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-227ENST00000640648 DNAAF4Q8WXU2 420 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 TIAM1Q13009 1591 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 TMCO5BA8MYB1 307 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 BCAR3O75815 825 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 TTC31Q49AM3 519 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-227ENST00000640648 FMNL3Q8IVF7 1028 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 DDX19BQ9UMR2 479 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 PLEKHH2Q8IVE3 1493 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 BECN2A8MW95 431 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 XRCC6P12956 609 aaKnown RBP eCLIP9.87□□□□□ -0.83
NECAP1-227ENST00000640648 CT47A1Q5JQC4 288 aaPredicted RBP9.87□□□□□ -0.83
NECAP1-227ENST00000640648 JAKMIP3Q5VZ66 844 aa9.87□□□□□ -0.83
NECAP1-227ENST00000640648 TACO1Q9BSH4 297 aaKnown RBP9.87□□□□□ -0.83
NECAP1-227ENST00000640648 RIPK4P57078 832 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 RILPL2Q969X0 211 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 PRDM10Q9NQV6 1147 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 CPSF2Q9P2I0 782 aaKnown RBP9.86□□□□□ -0.83
NECAP1-227ENST00000640648 PTPRGP23470 1445 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 PPP2R1AP30153 589 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 RUFY1Q96T51 708 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 NAT10Q9H0A0 1025 aaKnown RBP9.86□□□□□ -0.83
NECAP1-227ENST00000640648 GNL2Q13823 731 aaKnown RBP9.86□□□□□ -0.83
NECAP1-227ENST00000640648 RUNDC1Q96C34 613 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 GPATCH11Q8N954 259 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 LTV1Q96GA3 475 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-227ENST00000640648 TRIM34Q9BYJ4 488 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 YY1AP1Q9H869 796 aa9.86□□□□□ -0.83
NECAP1-227ENST00000640648 MIA2Q96PC5 1412 aa9.85□□□□□ -0.83
NECAP1-227ENST00000640648 HOMER1Q86YM7 354 aa9.85□□□□□ -0.83
NECAP1-227ENST00000640648 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.836e-7■■■■■ 30.6
NECAP1-227ENST00000640648 TUBBP07437 444 aa9.85□□□□□ -0.83
NECAP1-227ENST00000640648 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
NECAP1-227ENST00000640648 ANKRD20A12PQ8NF67 263 aa9.85□□□□□ -0.83
NECAP1-227ENST00000640648 EVC2Q86UK5 1308 aa9.85□□□□□ -0.83
NECAP1-227ENST00000640648 NF2P35240 595 aa9.85□□□□□ -0.83
NECAP1-227ENST00000640648 SH3BGRP55822 239 aaPredicted RBP9.85□□□□□ -0.83
NECAP1-227ENST00000640648 TCP11L2Q8N4U5 519 aa9.85□□□□□ -0.83
NECAP1-227ENST00000640648 CAVIN2O95810 425 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 PDE3AQ14432 1141 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 LUZP1Q86V48 1076 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 DYDC1Q8WWB3 177 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 ZNF592Q92610 1267 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 NOL7Q9UMY1 257 aaKnown RBP9.84□□□□□ -0.83
NECAP1-227ENST00000640648 NAIPQ13075 1403 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 SHTN1A0MZ66 631 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 A6NNZ2 444 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 TUBB8Q3ZCM7 444 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 RRP12Q5JTH9 1297 aaKnown RBP9.84□□□□□ -0.83
NECAP1-227ENST00000640648 A0A1B0GUA9 196 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 KLHL40Q2TBA0 621 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 TOP2BQ02880 1626 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 HMGB1P1B2RPK0 211 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-227ENST00000640648 TMEM132EQ6IEE7 984 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 MYRIPQ8NFW9 859 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
NECAP1-227ENST00000640648 NCAPD3P42695 1498 aa9.83□□□□□ -0.84
NECAP1-227ENST00000640648 GOLGA6L9A6NEM1 432 aa9.83□□□□□ -0.84
NECAP1-227ENST00000640648 MTHFSP49914 203 aa9.83□□□□□ -0.84
NECAP1-227ENST00000640648 PPM1EQ8WY54 764 aa9.83□□□□□ -0.84
NECAP1-227ENST00000640648 RRAGDQ9NQL2 400 aaPredicted RBP9.83□□□□□ -0.84
NECAP1-227ENST00000640648 DIAPH1O60610 1272 aaKnown RBP9.83□□□□□ -0.84
NECAP1-227ENST00000640648 CFAP70Q5T0N1 1121 aa9.83□□□□□ -0.84
NECAP1-227ENST00000640648 PDZRN3Q9UPQ7 1066 aa9.83□□□□□ -0.84
NECAP1-227ENST00000640648 ZNF500O60304 480 aaPredicted RBP9.83□□□□□ -0.84
NECAP1-227ENST00000640648 ATP6V1AP38606 617 aa9.83□□□□□ -0.84
NECAP1-227ENST00000640648 ZNF397Q8NF99 534 aaPredicted RBP9.83□□□□□ -0.84
NECAP1-227ENST00000640648 SRRTQ9BXP5 876 aaKnown RBP9.83□□□□□ -0.84
NECAP1-227ENST00000640648 PRDM2Q13029 1718 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 GOLGA6L10A0A0M3HER8 536 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 KIF18AQ8NI77 898 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 HMOX1P09601 288 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 GBP2P32456 591 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-227ENST00000640648 MIPOL1Q8TD10 442 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 MCTP1Q6DN14 999 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-227ENST00000640648 AMPHP49418 695 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 UBXN4Q92575 508 aa9.82□□□□□ -0.84
NECAP1-227ENST00000640648 GOLIM4O00461 696 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 SYCP1Q15431 976 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 RPAINQ86UA6 219 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 CCDC50Q8IVM0 306 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 NECTIN2Q92692 538 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 CHMP4AQ9BY43 222 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 CCDC192P0DO97 292 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 CCDC171Q6TFL3 1326 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 TRDNQ13061 729 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 NGDNQ8NEJ9 315 aaKnown RBP9.81□□□□□ -0.84
NECAP1-227ENST00000640648 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 C20orf194Q5TEA3 1177 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 KIAA1107Q9UPP5 1409 aa9.81□□□□□ -0.84
NECAP1-227ENST00000640648 ERICH4A6NGS2 130 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 LRCH2Q5VUJ6 765 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 PLEKHH1Q9ULM0 1364 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 ERC1Q8IUD2 1116 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 CABP2Q9NPB3 220 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 CHMP3Q9Y3E7 222 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms