RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 NUDT12Q9BQG2 462 aa7.02□□□□□ -1.29
ATM-230ENST00000640388 ZBTB24O43167 697 aaPredicted RBP7.01□□□□□ -1.29
ATM-230ENST00000640388 TRIM32Q13049 653 aa7.01□□□□□ -1.29
ATM-230ENST00000640388 TREML4Q6UXN2 200 aa7.01□□□□□ -1.29
ATM-230ENST00000640388 HELBQ8NG08 1087 aaPredicted RBP7.01□□□□□ -1.29
ATM-230ENST00000640388 AXIN1O15169 862 aa7□□□□□ -1.29
ATM-230ENST00000640388 PER1O15534 1290 aaPredicted RBP7□□□□□ -1.29
ATM-230ENST00000640388 CCNYL3P0C7X3 344 aa7□□□□□ -1.29
ATM-230ENST00000640388 RFC5P40937 340 aa7□□□□□ -1.29
ATM-230ENST00000640388 CTDSPL2Q05D32 466 aa7□□□□□ -1.29
ATM-230ENST00000640388 PTPRNQ16849 979 aa7□□□□□ -1.29
ATM-230ENST00000640388 LYPD8Q6UX82 237 aa7□□□□□ -1.29
ATM-230ENST00000640388 AP1G2O75843 785 aa6.99□□□□□ -1.29
ATM-230ENST00000640388 SNIP1Q8TAD8 396 aaKnown RBP6.99□□□□□ -1.29
ATM-230ENST00000640388 DACH1Q9UI36 760 aa6.99□□□□□ -1.29
ATM-230ENST00000640388 SMPD1P17405 629 aa6.98□□□□□ -1.29
ATM-230ENST00000640388 CTHP32929 405 aa6.98□□□□□ -1.29
ATM-230ENST00000640388 TMEM132AQ24JP5 1023 aa6.98□□□□□ -1.29
ATM-230ENST00000640388 PTCRAQ6ISU1 281 aaPredicted RBP6.98□□□□□ -1.29
ATM-230ENST00000640388 EVA1BQ9NVM1 165 aa6.98□□□□□ -1.29
ATM-230ENST00000640388 TTC24A2A3L6 582 aaPredicted RBP6.97□□□□□ -1.29
ATM-230ENST00000640388 WNT7BP56706 349 aa6.97□□□□□ -1.29
ATM-230ENST00000640388 KCNH2Q12809 1159 aa6.97□□□□□ -1.29
ATM-230ENST00000640388 TMEM259Q4ZIN3 620 aa6.96□□□□□ -1.3
ATM-230ENST00000640388 LRRN4Q8WUT4 740 aa6.96□□□□□ -1.3
ATM-230ENST00000640388 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
ATM-230ENST00000640388 GMPR2Q9P2T1 348 aaKnown RBP6.96□□□□□ -1.3
ATM-230ENST00000640388 MRGPRX2Q96LB1 330 aa6.95□□□□□ -1.3
ATM-230ENST00000640388 UNC93B1Q9H1C4 597 aa6.95□□□□□ -1.3
ATM-230ENST00000640388 F12P00748 615 aaPredicted RBP6.94□□□□□ -1.3
ATM-230ENST00000640388 USP17L8P0C7I0 530 aa6.94□□□□□ -1.3
ATM-230ENST00000640388 C11orf95C9JLR9 678 aaPredicted RBP6.93□□□□□ -1.3
ATM-230ENST00000640388 SKOR1P84550 965 aa6.93□□□□□ -1.3
ATM-230ENST00000640388 ATP13A2Q9NQ11 1180 aa6.93□□□□□ -1.3
ATM-230ENST00000640388 J3QL48 77 aa6.92□□□□□ -1.3
ATM-230ENST00000640388 WIPF1O43516 503 aa6.92□□□□□ -1.3
ATM-230ENST00000640388 WFS1O76024 890 aa6.92□□□□□ -1.3
ATM-230ENST00000640388 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
ATM-230ENST00000640388 BAP1Q92560 729 aa6.92□□□□□ -1.3
ATM-230ENST00000640388 NR6A1Q15406 480 aa6.91□□□□□ -1.3
ATM-230ENST00000640388 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
ATM-230ENST00000640388 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
ATM-230ENST00000640388 TRIM47Q96LD4 638 aa6.91□□□□□ -1.3
ATM-230ENST00000640388 SENP2Q9HC62 589 aa6.91□□□□□ -1.3
ATM-230ENST00000640388 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
ATM-230ENST00000640388 BANK1Q8NDB2 785 aa6.9□□□□□ -1.3
ATM-230ENST00000640388 EPS8L1Q8TE68 723 aa6.9□□□□□ -1.3
ATM-230ENST00000640388 ARMC2Q8NEN0 867 aa6.89□□□□□ -1.31
ATM-230ENST00000640388 KIFC2Q96AC6 838 aa6.89□□□□□ -1.31
ATM-230ENST00000640388 SNRKQ9NRH2 765 aa6.89□□□□□ -1.31
ATM-230ENST00000640388 SIAH2O43255 324 aa6.88□□□□□ -1.31
ATM-230ENST00000640388 SH3BP2P78314 561 aa6.88□□□□□ -1.31
ATM-230ENST00000640388 ZNF511Q8NB15 262 aa6.88□□□□□ -1.31
ATM-230ENST00000640388 HPS1Q92902 700 aa6.88□□□□□ -1.31
ATM-230ENST00000640388 AGERQ15109 404 aa6.86□□□□□ -1.31
ATM-230ENST00000640388 NBPF14Q5TI25 921 aa6.86□□□□□ -1.31
ATM-230ENST00000640388 MTMR14Q8NCE2 650 aa6.86□□□□□ -1.31
ATM-230ENST00000640388 EHBP1Q8NDI1 1231 aa6.86□□□□□ -1.31
ATM-230ENST00000640388 FOXJ1Q92949 421 aa6.86□□□□□ -1.31
ATM-230ENST00000640388 TRIM34Q9BYJ4 488 aa6.86□□□□□ -1.31
ATM-230ENST00000640388 FKBPLQ9UIM3 349 aa6.86□□□□□ -1.31
ATM-230ENST00000640388 SNRPBP14678 240 aaKnown RBP6.85□□□□□ -1.31
ATM-230ENST00000640388 GJD4Q96KN9 370 aaPredicted RBP6.85□□□□□ -1.31
ATM-230ENST00000640388 STK17AQ9UEE5 414 aa6.85□□□□□ -1.31
ATM-230ENST00000640388 TERTO14746 1132 aaKnown RBP6.84□□□□□ -1.31
ATM-230ENST00000640388 INSM1Q01101 510 aaPredicted RBP6.84□□□□□ -1.31
ATM-230ENST00000640388 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
ATM-230ENST00000640388 PNMA1Q8ND90 353 aa6.84□□□□□ -1.31
ATM-230ENST00000640388 APBB1O00213 710 aa6.83□□□□□ -1.32
ATM-230ENST00000640388 BPHLQ86WA6 291 aaPredicted RBP6.83□□□□□ -1.32
ATM-230ENST00000640388 MPNDQ8N594 471 aa6.83□□□□□ -1.32
ATM-230ENST00000640388 GPKOWQ92917 476 aaPredicted RBP eCLIP6.83□□□□□ -1.32
ATM-230ENST00000640388 MAGEB6P1A0A0J9YX57 407 aa6.82□□□□□ -1.32
ATM-230ENST00000640388 ALDH1A1P00352 501 aa6.82□□□□□ -1.32
ATM-230ENST00000640388 VARSP26640 1264 aaKnown RBP6.82□□□□□ -1.32
ATM-230ENST00000640388 C4orf48Q5BLP8 95 aa6.82□□□□□ -1.32
ATM-230ENST00000640388 PDXDC2PQ6P474 469 aa6.82□□□□□ -1.32
ATM-230ENST00000640388 CARD14Q9BXL6 1004 aa6.82□□□□□ -1.32
ATM-230ENST00000640388 ZC3H4Q9UPT8 1303 aaKnown RBP6.81□□□□□ -1.32
ATM-230ENST00000640388 SOCS7O14512 581 aa6.81□□□□□ -1.32
ATM-230ENST00000640388 MCM6Q14566 821 aa6.81□□□□□ -1.32
ATM-230ENST00000640388 SH3BP5LQ7L8J4 393 aa6.81□□□□□ -1.32
ATM-230ENST00000640388 SH3RF1Q7Z6J0 888 aa6.81□□□□□ -1.32
ATM-230ENST00000640388 NPAS3Q8IXF0 933 aa6.81□□□□□ -1.32
ATM-230ENST00000640388 ARHGAP9Q9BRR9 750 aa6.81□□□□□ -1.32
ATM-230ENST00000640388 NDUFB9Q9Y6M9 179 aa6.81□□□□□ -1.32
ATM-230ENST00000640388 PTK2Q05397 1052 aa6.8□□□□□ -1.32
ATM-230ENST00000640388 FAM174AQ8TBP5 190 aa6.8□□□□□ -1.32
ATM-230ENST00000640388 PRM3Q9NNZ6 103 aa6.8□□□□□ -1.32
ATM-230ENST00000640388 FLIIQ13045 1269 aa6.79□□□□□ -1.32
ATM-230ENST00000640388 ARID5BQ14865 1188 aa6.79□□□□□ -1.32
ATM-230ENST00000640388 TRIM46Q7Z4K8 759 aa6.79□□□□□ -1.32
ATM-230ENST00000640388 ZBTB33Q86T24 672 aa6.79□□□□□ -1.32
ATM-230ENST00000640388 TBC1D2BQ9UPU7 963 aa6.79□□□□□ -1.32
ATM-230ENST00000640388 TLL2Q9Y6L7 1015 aa6.79□□□□□ -1.32
ATM-230ENST00000640388 GDPD2Q9HCC8 539 aa6.78□□□□□ -1.32
ATM-230ENST00000640388 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
ATM-230ENST00000640388 WASF2Q9Y6W5 498 aa6.78□□□□□ -1.32
ATM-230ENST00000640388 CAPN5O15484 640 aaPredicted RBP6.77□□□□□ -1.33
ATM-230ENST00000640388 GPR37L1O60883 481 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms