RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 MAP7Q14244 749 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 FILIP1LQ4L180 1135 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 HSP90AB2PQ58FF8 381 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 PIAS4Q8N2W9 510 aaPredicted RBP6.39□□□□□ -1.39
RTTN-214ENST00000639128 WHAMMQ8TF30 809 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 MAP7D1Q3KQU3 841 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 CENPQQ7L2Z9 268 aaPredicted RBP6.39□□□□□ -1.39
RTTN-214ENST00000639128 GBP7Q8N8V2 638 aaPredicted RBP6.39□□□□□ -1.39
RTTN-214ENST00000639128 MSH5O43196 834 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 PDE4AP27815 886 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 GTF2F1P35269 517 aaKnown RBP eCLIP6.39□□□□□ -1.39
RTTN-214ENST00000639128 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 IL27Q8NEV9 243 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 FBF1Q8TES7 1133 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 SEPT8Q92599 483 aa6.39□□□□□ -1.39
RTTN-214ENST00000639128 PCMTD1Q96MG8 357 aaPredicted RBP6.39□□□□□ -1.39
RTTN-214ENST00000639128 H3BQV1 296 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 TAF7Q15545 349 aaPredicted RBP6.38□□□□□ -1.39
RTTN-214ENST00000639128 IFFO2Q5TF58 517 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 OFD1O75665 1012 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 TMF1P82094 1093 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 RNF187Q5TA31 235 aaPredicted RBP6.38□□□□□ -1.39
RTTN-214ENST00000639128 FRAT1Q92837 279 aaPredicted RBP6.38□□□□□ -1.39
RTTN-214ENST00000639128 STMN2Q93045 179 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 TUBB4AP04350 444 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 CBX1P83916 185 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 NUCB1Q02818 461 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 CCDC40Q4G0X9 1142 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 MIER3Q7Z3K6 550 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 POTEDQ86YR6 584 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 RABEP2Q9H5N1 569 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 BRPF3Q9ULD4 1205 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 MACROD2A1Z1Q3 448 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 TUBBP07437 444 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 PSMD7P51665 324 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 NAA25Q14CX7 972 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 CCDC152Q4G0S7 254 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 OLFM4Q6UX06 510 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 RPAINQ86UA6 219 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 WDR63Q8IWG1 891 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 DHX37Q8IY37 1157 aaKnown RBP6.38□□□□□ -1.39
RTTN-214ENST00000639128 RAB3IL1Q8TBN0 382 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 NSRP1Q9H0G5 558 aaKnown RBP6.38□□□□□ -1.39
RTTN-214ENST00000639128 TSPY26PQ9H489 355 aa6.38□□□□□ -1.39
RTTN-214ENST00000639128 NEMFO60524 1076 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 AIMP1Q12904 312 aaKnown RBP6.37□□□□□ -1.39
RTTN-214ENST00000639128 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 CCDC110Q8TBZ0 833 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 TRIM5Q9C035 493 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 STIM2Q9P246 746 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 SESN3P58005 492 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 AAMPQ13685 434 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 CCDC27Q2M243 656 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 LCA5Q86VQ0 697 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 TSPYL2Q9H2G4 693 aaPredicted RBP6.37□□□□□ -1.39
RTTN-214ENST00000639128 CBFA2T2O43439 604 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 KIF18AQ8NI77 898 aa6.37□□□□□ -1.39
RTTN-214ENST00000639128 ANKRD62A6NC57 917 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 EBAG9O00559 213 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 TRAK2O60296 914 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 REC8O95072 547 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 CEP128Q6ZU80 1094 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.36□□□□□ -1.39
RTTN-214ENST00000639128 ZWINTO95229 277 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 GABPB1Q06547 395 aaPredicted RBP6.36□□□□□ -1.39
RTTN-214ENST00000639128 SOGA3Q5TF21 947 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 CACNA2D3Q8IZS8 1091 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 BICD2Q8TD16 824 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 EIF2AQ9BY44 585 aaKnown RBP6.36□□□□□ -1.39
RTTN-214ENST00000639128 BRMS1Q9HCU9 246 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 RCAN3Q9UKA8 241 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 CCDC160A6NGH7 325 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 CASQ2O14958 399 aaPredicted RBP6.36□□□□□ -1.39
RTTN-214ENST00000639128 SMC2O95347 1197 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 CLNS1AP54105 237 aaKnown RBP6.36□□□□□ -1.39
RTTN-214ENST00000639128 CCDC148Q8NFR7 591 aa6.36□□□□□ -1.39
RTTN-214ENST00000639128 ZRANB2O95218 330 aaKnown RBP eCLIP6.35□□□□□ -1.39
RTTN-214ENST00000639128 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 CCDC83Q8IWF9 413 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 CNPY4Q8N129 248 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 BICD1Q96G01 975 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 GRPEL1Q9HAV7 217 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 CGNL1Q0VF96 1302 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 PHLDB1Q86UU1 1377 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 MGEA5O60502 916 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 DIAPH1O60610 1272 aaKnown RBP6.35□□□□□ -1.39
RTTN-214ENST00000639128 CCDC114Q96M63 670 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 CCDC94Q9BW85 323 aaPredicted RBP6.35□□□□□ -1.39
RTTN-214ENST00000639128 VCX3BQ9H321 246 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 KIF1CO43896 1103 aaKnown RBP6.35□□□□□ -1.39
RTTN-214ENST00000639128 SETDB1Q15047 1291 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 CEP112Q8N8E3 955 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 DDX27Q96GQ7 796 aaKnown RBP6.35□□□□□ -1.39
RTTN-214ENST00000639128 EFCC1Q9HA90 598 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 SMC4Q9NTJ3 1288 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 ZSCAN12O43309 604 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 RLBP1P12271 317 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 TSNAXIP1Q2TAA8 658 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 PPP6R1Q9UPN7 881 aa6.35□□□□□ -1.39
RTTN-214ENST00000639128 GFAPP14136 432 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms