RNA–Protein interactions for RNA: ENST00000638149.1

GABRB3-226, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-226ENST00000638149 CHRNA2Q15822 529 aa6.84□□□□□ -1.31
GABRB3-226ENST00000638149 NUTM2GQ5VZR2 741 aa6.84□□□□□ -1.31
GABRB3-226ENST00000638149 IFT172Q9UG01 1749 aa6.84□□□□□ -1.31
GABRB3-226ENST00000638149 ABCC11Q96J66 1382 aa6.83□□□□□ -1.32
GABRB3-226ENST00000638149 ANKRD30BQ9BXX2 1392 aa6.83□□□□□ -1.32
GABRB3-226ENST00000638149 MINK1Q8N4C8 1332 aaPredicted RBP6.83□□□□□ -1.32
GABRB3-226ENST00000638149 RGPD8O14715 1765 aaPredicted RBP6.83□□□□□ -1.32
GABRB3-226ENST00000638149 KCNQ2O43526 872 aa6.83□□□□□ -1.32
GABRB3-226ENST00000638149 CAMKK2Q96RR4 588 aa6.83□□□□□ -1.32
GABRB3-226ENST00000638149 PRAG1Q86YV5 1406 aa6.83□□□□□ -1.32
GABRB3-226ENST00000638149 COL14A1Q05707 1796 aaKnown RBP6.82□□□□□ -1.32
GABRB3-226ENST00000638149 NRXN1Q9ULB1 1477 aa6.82□□□□□ -1.32
GABRB3-226ENST00000638149 CFAP70Q5T0N1 1121 aa6.82□□□□□ -1.32
GABRB3-226ENST00000638149 BCL11BQ9C0K0 894 aaPredicted RBP6.82□□□□□ -1.32
GABRB3-226ENST00000638149 TRAK1Q9UPV9 953 aa6.82□□□□□ -1.32
GABRB3-226ENST00000638149 PARD3Q8TEW0 1356 aa6.82□□□□□ -1.32
GABRB3-226ENST00000638149 ABCA3Q99758 1704 aa6.81□□□□□ -1.32
GABRB3-226ENST00000638149 KLHL34Q8N239 644 aa6.81□□□□□ -1.32
GABRB3-226ENST00000638149 TECPR2O15040 1411 aa6.81□□□□□ -1.32
GABRB3-226ENST00000638149 KNDC1Q76NI1 1749 aa6.81□□□□□ -1.32
GABRB3-226ENST00000638149 NRAPQ86VF7 1730 aa6.81□□□□□ -1.32
GABRB3-226ENST00000638149 EIF3AQ14152 1382 aaKnown RBP6.81□□□□□ -1.32
GABRB3-226ENST00000638149 KIAA0232Q92628 1395 aa6.81□□□□□ -1.32
GABRB3-226ENST00000638149 SPATA31A1Q5TZJ5 1347 aa6.8□□□□□ -1.32
GABRB3-226ENST00000638149 ACIN1Q9UKV3 1341 aaKnown RBP6.8□□□□□ -1.32
GABRB3-226ENST00000638149 ZBTB7AO95365 584 aa6.8□□□□□ -1.32
GABRB3-226ENST00000638149 PELP1Q8IZL8 1130 aaKnown RBP6.8□□□□□ -1.32
GABRB3-226ENST00000638149 TNS1Q9HBL0 1735 aaKnown RBP6.8□□□□□ -1.32
GABRB3-226ENST00000638149 NINLQ9Y2I6 1382 aa6.8□□□□□ -1.32
GABRB3-226ENST00000638149 DISP2A7MBM2 1401 aa6.79□□□□□ -1.32
GABRB3-226ENST00000638149 PIK3C2GO75747 1445 aa6.79□□□□□ -1.32
GABRB3-226ENST00000638149 ANKARQ7Z5J8 1434 aa6.79□□□□□ -1.32
GABRB3-226ENST00000638149 TCP11L2Q8N4U5 519 aa6.79□□□□□ -1.32
GABRB3-226ENST00000638149 SIRT1Q96EB6 747 aa6.79□□□□□ -1.32
GABRB3-226ENST00000638149 MPHOSPH9Q99550 1183 aa6.79□□□□□ -1.32
GABRB3-226ENST00000638149 C14orf93Q9H972 538 aaKnown RBP6.79□□□□□ -1.32
GABRB3-226ENST00000638149 ATF5Q9Y2D1 282 aaPredicted RBP6.79□□□□□ -1.32
GABRB3-226ENST00000638149 KDM2AQ9Y2K7 1162 aa6.79□□□□□ -1.32
GABRB3-226ENST00000638149 LARP1Q6PKG0 1096 aaKnown RBP6.78□□□□□ -1.32
GABRB3-226ENST00000638149 ABTB2Q8N961 1025 aa6.78□□□□□ -1.32
GABRB3-226ENST00000638149 ZNF784Q8NCA9 323 aaPredicted RBP6.78□□□□□ -1.32
GABRB3-226ENST00000638149 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
GABRB3-226ENST00000638149 WASLO00401 505 aaPredicted RBP6.77□□□□□ -1.33
GABRB3-226ENST00000638149 THSD7AQ9UPZ6 1657 aa6.77□□□□□ -1.33
GABRB3-226ENST00000638149 CAMTA1Q9Y6Y1 1673 aa6.77□□□□□ -1.33
GABRB3-226ENST00000638149 NUP188Q5SRE5 1749 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 C11orf95C9JLR9 678 aaPredicted RBP6.76□□□□□ -1.33
GABRB3-226ENST00000638149 CSB-PGBD3P0DP91 1061 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 C1QTNF8P60827 252 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 DDB1Q16531 1140 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 GPR162Q16538 588 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 BARGINQ6ZT62 677 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 TOM1L2Q6ZVM7 507 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 SPATA31E1Q6ZUB1 1445 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 SSH2Q76I76 1423 aa6.76□□□□□ -1.33
GABRB3-226ENST00000638149 NRKQ7Z2Y5 1582 aa6.75□□□□□ -1.33
GABRB3-226ENST00000638149 GIGYF1O75420 1035 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-226ENST00000638149 NUDT16Q96DE0 195 aaKnown RBP6.75□□□□□ -1.33
GABRB3-226ENST00000638149 FHDC1Q9C0D6 1143 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-226ENST00000638149 TRPM3Q9HCF6 1732 aaPredicted RBP6.75□□□□□ -1.33
GABRB3-226ENST00000638149 TULP4Q9NRJ4 1543 aa6.75□□□□□ -1.33
GABRB3-226ENST00000638149 OVOS2A0A0G2JMS6 1433 aa6.75□□□□□ -1.33
GABRB3-226ENST00000638149 OVOS2A0A0J9YW53 1432 aa6.75□□□□□ -1.33
GABRB3-226ENST00000638149 OVOS2Q6IE36 1432 aa6.75□□□□□ -1.33
GABRB3-226ENST00000638149 PRR36Q9H6K5 1346 aa6.75□□□□□ -1.33
GABRB3-226ENST00000638149 RREB1Q92766 1687 aa6.74□□□□□ -1.33
GABRB3-226ENST00000638149 ALS2Q96Q42 1657 aa6.74□□□□□ -1.33
GABRB3-226ENST00000638149 SOX12O15370 315 aa6.74□□□□□ -1.33
GABRB3-226ENST00000638149 SRPK2P78362 688 aaKnown RBP6.74□□□□□ -1.33
GABRB3-226ENST00000638149 IFFO2Q5TF58 517 aa6.74□□□□□ -1.33
GABRB3-226ENST00000638149 NLRP13Q86W25 1043 aa6.74□□□□□ -1.33
GABRB3-226ENST00000638149 DCAF11Q8TEB1 546 aa6.74□□□□□ -1.33
GABRB3-226ENST00000638149 THRAP3Q9Y2W1 955 aaKnown RBP6.74□□□□□ -1.33
GABRB3-226ENST00000638149 PHRF1Q9P1Y6 1649 aaKnown RBP6.73□□□□□ -1.33
GABRB3-226ENST00000638149 DLC1Q96QB1 1528 aa6.73□□□□□ -1.33
GABRB3-226ENST00000638149 SYT17Q9BSW7 474 aa6.73□□□□□ -1.33
GABRB3-226ENST00000638149 CDK19Q9BWU1 502 aa6.73□□□□□ -1.33
GABRB3-226ENST00000638149 PDGFDQ9GZP0 370 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-226ENST00000638149 ANO8Q9HCE9 1232 aaPredicted RBP6.73□□□□□ -1.33
GABRB3-226ENST00000638149 ACEP12821 1306 aa6.73□□□□□ -1.33
GABRB3-226ENST00000638149 ITSN1Q15811 1721 aa6.73□□□□□ -1.33
GABRB3-226ENST00000638149 ATP7BP35670 1465 aa6.73□□□□□ -1.33
GABRB3-226ENST00000638149 PLSCR1O15162 318 aa6.72□□□□□ -1.33
GABRB3-226ENST00000638149 NLRP6P59044 892 aa6.72□□□□□ -1.33
GABRB3-226ENST00000638149 ARXQ96QS3 562 aa6.72□□□□□ -1.33
GABRB3-226ENST00000638149 MTFR1LQ9H019 292 aa6.72□□□□□ -1.33
GABRB3-226ENST00000638149 MYOM1P52179 1685 aa6.71□□□□□ -1.33
GABRB3-226ENST00000638149 CRB1P82279 1406 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 EXOC5O00471 708 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 MSH5O43196 834 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 GCP02774 474 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 POLD1P28340 1107 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 SLC15A2Q16348 729 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 TXNRD1Q16881 649 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 ACSBG1Q96GR2 724 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 CCDC61Q9Y6R9 512 aa6.71□□□□□ -1.34
GABRB3-226ENST00000638149 CRYBG1Q9Y4K1 1723 aa6.7□□□□□ -1.34
GABRB3-226ENST00000638149 COL5A2P05997 1499 aaPredicted RBP6.69□□□□□ -1.34
GABRB3-226ENST00000638149 PTGER2P43116 358 aa6.69□□□□□ -1.34
GABRB3-226ENST00000638149 PTF1AQ7RTS3 328 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms