RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 PIK3CDO00329 1044 aa11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 F12P00748 615 aaPredicted RBP11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 ZFRQ96KR1 1074 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 PRR14Q9BWN1 585 aa11.05□□□□□ -0.64
SMARCA2-220ENST00000634338 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-220ENST00000634338 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 STK32AQ8WU08 396 aa11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 USB1Q9BQ65 265 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
SMARCA2-220ENST00000634338 SKIP12755 728 aa11.02□□□□□ -0.65
SMARCA2-220ENST00000634338 CDAN1Q8IWY9 1227 aa11.02□□□□□ -0.65
SMARCA2-220ENST00000634338 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-220ENST00000634338 ERBB3P21860 1342 aa11.02□□□□□ -0.65
SMARCA2-220ENST00000634338 FAM196BA6NMK8 535 aa11.01□□□□□ -0.65
SMARCA2-220ENST00000634338 BLOC1S3Q6QNY0 202 aa11.01□□□□□ -0.65
SMARCA2-220ENST00000634338 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
SMARCA2-220ENST00000634338 ZNF592Q92610 1267 aa11.01□□□□□ -0.65
SMARCA2-220ENST00000634338 PTPRNQ16849 979 aa11□□□□□ -0.65
SMARCA2-220ENST00000634338 BRICD5Q6PL45 260 aa11□□□□□ -0.65
SMARCA2-220ENST00000634338 LRCH3Q96II8 777 aa11□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L21D6R901 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 JUNDP17535 347 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 FAM174AQ8TBP5 190 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 MAP10Q9P2G4 905 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 GPSM3Q9Y4H4 160 aa10.98□□□□□ -0.65
SMARCA2-220ENST00000634338 TK2O00142 265 aa10.97□□□□□ -0.65
SMARCA2-220ENST00000634338 PHLDB3Q6NSJ2 640 aa10.97□□□□□ -0.65
SMARCA2-220ENST00000634338 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-220ENST00000634338 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-220ENST00000634338 MCCD1P59942 119 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-220ENST00000634338 CRTC2Q53ET0 693 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-220ENST00000634338 THAP11Q96EK4 314 aa10.96□□□□□ -0.65
SMARCA2-220ENST00000634338 MKRN1Q9UHC7 482 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-220ENST00000634338 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
SMARCA2-220ENST00000634338 LZTS3O60299 673 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-220ENST00000634338 SSFA2P28290 1259 aa10.95□□□□□ -0.66
SMARCA2-220ENST00000634338 DEPDC4Q8N2C3 294 aa10.95□□□□□ -0.66
SMARCA2-220ENST00000634338 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.66
SMARCA2-220ENST00000634338 PTK2Q05397 1052 aa10.94□□□□□ -0.66
SMARCA2-220ENST00000634338 PTK7Q13308 1070 aa10.94□□□□□ -0.66
SMARCA2-220ENST00000634338 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
SMARCA2-220ENST00000634338 LARP1Q6PKG0 1096 aaKnown RBP10.94□□□□□ -0.66
SMARCA2-220ENST00000634338 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
SMARCA2-220ENST00000634338 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
SMARCA2-220ENST00000634338 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
SMARCA2-220ENST00000634338 NCOA4Q13772 614 aa10.93□□□□□ -0.66
SMARCA2-220ENST00000634338 PDXDC2PQ6P474 469 aa10.93□□□□□ -0.66
SMARCA2-220ENST00000634338 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
SMARCA2-220ENST00000634338 CLP1Q92989 425 aaKnown RBP10.93□□□□□ -0.66
SMARCA2-220ENST00000634338 NR1I2O75469 434 aa10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 RASA1P20936 1047 aa10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 CTHP32929 405 aa10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 RNF135Q8IUD6 432 aa10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 SCUBE3Q8IX30 993 aa10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 PHTF2Q8N3S3 785 aa10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 FAM200AQ8TCP9 573 aa10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
SMARCA2-220ENST00000634338 FAM69CQ0P6D2 419 aa10.91□□□□□ -0.66
SMARCA2-220ENST00000634338 PLPP7Q8NBV4 271 aa10.91□□□□□ -0.66
SMARCA2-220ENST00000634338 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
SMARCA2-220ENST00000634338 CCNYL3P0C7X3 344 aa10.9□□□□□ -0.66
SMARCA2-220ENST00000634338 ERCC3P19447 782 aa10.9□□□□□ -0.66
SMARCA2-220ENST00000634338 MSS51Q4VC12 460 aa10.9□□□□□ -0.66
SMARCA2-220ENST00000634338 CHIC2Q9UKJ5 165 aa10.9□□□□□ -0.66
SMARCA2-220ENST00000634338 PCDHB3Q9Y5E6 796 aa10.9□□□□□ -0.66
SMARCA2-220ENST00000634338 APLP1P51693 650 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 MAP7D1Q3KQU3 841 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 NBPF14Q5TI25 921 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 ANKMY2Q8IV38 441 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 OCSTAMPQ9BR26 566 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 EVA1BQ9NVM1 165 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 PCDHB9Q9Y5E1 797 aa10.89□□□□□ -0.67
SMARCA2-220ENST00000634338 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
SMARCA2-220ENST00000634338 PPP4CP60510 307 aa10.88□□□□□ -0.67
SMARCA2-220ENST00000634338 SWI5Q1ZZU3 235 aa10.88□□□□□ -0.67
SMARCA2-220ENST00000634338 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
SMARCA2-220ENST00000634338 DXOO77932 396 aaKnown RBP10.87□□□□□ -0.67
SMARCA2-220ENST00000634338 KCNH2Q12809 1159 aa10.87□□□□□ -0.67
SMARCA2-220ENST00000634338 EML3Q32P44 896 aa10.87□□□□□ -0.67
SMARCA2-220ENST00000634338 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms