RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 NINLQ9Y2I6 1382 aa18.03■□□□□ 0.48
CHD2-218ENST00000629346 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
CHD2-218ENST00000629346 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
CHD2-218ENST00000629346 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.48
CHD2-218ENST00000629346 CAMTA1Q9Y6Y1 1673 aa18.02■□□□□ 0.47
CHD2-218ENST00000629346 SPATA31A1Q5TZJ5 1347 aa18.01■□□□□ 0.47
CHD2-218ENST00000629346 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
CHD2-218ENST00000629346 STRN4Q9NRL3 753 aa18.01■□□□□ 0.47
CHD2-218ENST00000629346 USP35Q9P2H5 1018 aa18.01■□□□□ 0.47
CHD2-218ENST00000629346 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
CHD2-218ENST00000629346 PDE3BQ13370 1112 aa18■□□□□ 0.47
CHD2-218ENST00000629346 NUP188Q5SRE5 1749 aa18■□□□□ 0.47
CHD2-218ENST00000629346 RREB1Q92766 1687 aa17.99■□□□□ 0.47
CHD2-218ENST00000629346 CHRNA2Q15822 529 aa17.98■□□□□ 0.47
CHD2-218ENST00000629346 SIRT1Q96EB6 747 aa17.98■□□□□ 0.47
CHD2-218ENST00000629346 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
CHD2-218ENST00000629346 PRAM1Q96QH2 718 aa17.97■□□□□ 0.47
CHD2-218ENST00000629346 GPRASP1Q5JY77 1395 aa17.96■□□□□ 0.47
CHD2-218ENST00000629346 ANKRD30BQ9BXX2 1392 aa17.96■□□□□ 0.47
CHD2-218ENST00000629346 TRPM3Q9HCF6 1732 aaPredicted RBP17.95■□□□□ 0.46
CHD2-218ENST00000629346 C1QTNF8P60827 252 aa17.94■□□□□ 0.46
CHD2-218ENST00000629346 POGKQ9P215 609 aa17.94■□□□□ 0.46
CHD2-218ENST00000629346 PIK3C2GO75747 1445 aa17.94■□□□□ 0.46
CHD2-218ENST00000629346 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
CHD2-218ENST00000629346 EVA1CP58658 441 aa17.93■□□□□ 0.46
CHD2-218ENST00000629346 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
CHD2-218ENST00000629346 ALS2Q96Q42 1657 aa17.93■□□□□ 0.46
CHD2-218ENST00000629346 ZC3H6P61129 1189 aaKnown RBP17.92■□□□□ 0.46
CHD2-218ENST00000629346 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
CHD2-218ENST00000629346 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
CHD2-218ENST00000629346 ANKARQ7Z5J8 1434 aa17.91■□□□□ 0.46
CHD2-218ENST00000629346 CFAP70Q5T0N1 1121 aa17.91■□□□□ 0.46
CHD2-218ENST00000629346 NGDNQ8NEJ9 315 aaKnown RBP17.91■□□□□ 0.46
CHD2-218ENST00000629346 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
CHD2-218ENST00000629346 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
CHD2-218ENST00000629346 ZBTB7AO95365 584 aa17.9■□□□□ 0.46
CHD2-218ENST00000629346 C14orf93Q9H972 538 aaKnown RBP17.9■□□□□ 0.46
CHD2-218ENST00000629346 NUTM2GQ5VZR2 741 aa17.89■□□□□ 0.45
CHD2-218ENST00000629346 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
CHD2-218ENST00000629346 NRKQ7Z2Y5 1582 aa17.88■□□□□ 0.45
CHD2-218ENST00000629346 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
CHD2-218ENST00000629346 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
CHD2-218ENST00000629346 UTRNP46939 3433 aa17.88■□□□□ 0.45
CHD2-218ENST00000629346 CRYBG1Q9Y4K1 1723 aa17.87■□□□□ 0.45
CHD2-218ENST00000629346 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
CHD2-218ENST00000629346 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
CHD2-218ENST00000629346 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
CHD2-218ENST00000629346 TCP11L2Q8N4U5 519 aa17.86■□□□□ 0.45
CHD2-218ENST00000629346 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
CHD2-218ENST00000629346 PTGER2P43116 358 aa17.84■□□□□ 0.45
CHD2-218ENST00000629346 SYT17Q9BSW7 474 aa17.84■□□□□ 0.45
CHD2-218ENST00000629346 FHDC1Q9C0D6 1143 aaPredicted RBP17.84■□□□□ 0.45
CHD2-218ENST00000629346 BCL11BQ9C0K0 894 aaPredicted RBP17.84■□□□□ 0.45
CHD2-218ENST00000629346 MYOM1P52179 1685 aa17.83■□□□□ 0.45
CHD2-218ENST00000629346 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
CHD2-218ENST00000629346 PLSCR1O15162 318 aa17.81■□□□□ 0.44
CHD2-218ENST00000629346 PTF1AQ7RTS3 328 aa17.81■□□□□ 0.44
CHD2-218ENST00000629346 CASZ1Q86V15 1759 aa17.81■□□□□ 0.44
CHD2-218ENST00000629346 WASLO00401 505 aaPredicted RBP17.8■□□□□ 0.44
CHD2-218ENST00000629346 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
CHD2-218ENST00000629346 PHRF1Q9P1Y6 1649 aaKnown RBP17.79■□□□□ 0.44
CHD2-218ENST00000629346 TULP4Q9NRJ4 1543 aa17.78■□□□□ 0.44
CHD2-218ENST00000629346 THRAP3Q9Y2W1 955 aaKnown RBP17.78■□□□□ 0.44
CHD2-218ENST00000629346 DLC1Q96QB1 1528 aa17.77■□□□□ 0.44
CHD2-218ENST00000629346 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.44
CHD2-218ENST00000629346 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.44
CHD2-218ENST00000629346 PROM2Q8N271 834 aa17.77■□□□□ 0.44
CHD2-218ENST00000629346 OVOS2A0A0G2JMS6 1433 aa17.76■□□□□ 0.43
CHD2-218ENST00000629346 OVOS2A0A0J9YW53 1432 aa17.76■□□□□ 0.43
CHD2-218ENST00000629346 OVOS2Q6IE36 1432 aa17.76■□□□□ 0.43
CHD2-218ENST00000629346 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
CHD2-218ENST00000629346 CHD4Q14839 1912 aa17.76■□□□□ 0.43
CHD2-218ENST00000629346 CEP350Q5VT06 3117 aa17.75■□□□□ 0.43
CHD2-218ENST00000629346 STK32BQ9NY57 414 aa17.75■□□□□ 0.43
CHD2-218ENST00000629346 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
CHD2-218ENST00000629346 NUDT16Q96DE0 195 aaKnown RBP17.74■□□□□ 0.43
CHD2-218ENST00000629346 DDB1Q16531 1140 aa17.73■□□□□ 0.43
CHD2-218ENST00000629346 GPR162Q16538 588 aa17.73■□□□□ 0.43
CHD2-218ENST00000629346 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
CHD2-218ENST00000629346 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
CHD2-218ENST00000629346 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
CHD2-218ENST00000629346 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
CHD2-218ENST00000629346 ATP7BP35670 1465 aa17.72■□□□□ 0.43
CHD2-218ENST00000629346 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
CHD2-218ENST00000629346 MTFR1LQ9H019 292 aa17.72■□□□□ 0.43
CHD2-218ENST00000629346 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
CHD2-218ENST00000629346 ARXQ96QS3 562 aa17.71■□□□□ 0.43
CHD2-218ENST00000629346 PEAK1Q9H792 1746 aa17.71■□□□□ 0.43
CHD2-218ENST00000629346 LMO7Q8WWI1 1683 aa17.7■□□□□ 0.42
CHD2-218ENST00000629346 SBF2Q86WG5 1849 aa17.7■□□□□ 0.42
CHD2-218ENST00000629346 ACEP12821 1306 aa17.7■□□□□ 0.42
CHD2-218ENST00000629346 CPDO75976 1380 aa17.69■□□□□ 0.42
CHD2-218ENST00000629346 SGIP1Q9BQI5 828 aa17.69■□□□□ 0.42
CHD2-218ENST00000629346 COL5A2P05997 1499 aaPredicted RBP17.69■□□□□ 0.42
CHD2-218ENST00000629346 ADGRB1O14514 1584 aa17.68■□□□□ 0.42
CHD2-218ENST00000629346 CRB1P82279 1406 aa17.68■□□□□ 0.42
CHD2-218ENST00000629346 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
CHD2-218ENST00000629346 MARCH10Q8NA82 808 aaPredicted RBP17.68■□□□□ 0.42
CHD2-218ENST00000629346 GCP02774 474 aa17.67■□□□□ 0.42
CHD2-218ENST00000629346 TOM1L2Q6ZVM7 507 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms