RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 SLC12A5Q9H2X9 1139 aa14.03□□□□□ -0.16
ATRX-216ENST00000624403 FAM135BQ49AJ0 1406 aa14.03□□□□□ -0.16
ATRX-216ENST00000624403 CPS1P31327 1500 aa14.03□□□□□ -0.16
ATRX-216ENST00000624403 BRD4O60885 1362 aaPredicted RBP14.02□□□□□ -0.17
ATRX-216ENST00000624403 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.17
ATRX-216ENST00000624403 SRPK2P78362 688 aaKnown RBP14.02□□□□□ -0.17
ATRX-216ENST00000624403 TBX22Q9Y458 520 aa14.02□□□□□ -0.17
ATRX-216ENST00000624403 CDK19Q9BWU1 502 aa14.01□□□□□ -0.17
ATRX-216ENST00000624403 PTPRUQ92729 1446 aa14□□□□□ -0.17
ATRX-216ENST00000624403 ATAD2Q6PL18 1390 aa14□□□□□ -0.17
ATRX-216ENST00000624403 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
ATRX-216ENST00000624403 FAM9BQ8IZU0 186 aa14□□□□□ -0.17
ATRX-216ENST00000624403 TRPC6Q9Y210 931 aa14□□□□□ -0.17
ATRX-216ENST00000624403 DIP2AQ14689 1571 aa14□□□□□ -0.17
ATRX-216ENST00000624403 NINLQ9Y2I6 1382 aa13.99□□□□□ -0.17
ATRX-216ENST00000624403 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
ATRX-216ENST00000624403 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
ATRX-216ENST00000624403 ANKRD36BQ8N2N9 1353 aa13.98□□□□□ -0.17
ATRX-216ENST00000624403 ANKLE2Q86XL3 938 aa13.98□□□□□ -0.17
ATRX-216ENST00000624403 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
ATRX-216ENST00000624403 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
ATRX-216ENST00000624403 WASLO00401 505 aaPredicted RBP13.96□□□□□ -0.17
ATRX-216ENST00000624403 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
ATRX-216ENST00000624403 PCDHB13Q9Y5F0 798 aa13.96□□□□□ -0.17
ATRX-216ENST00000624403 SETD1BQ9UPS6 1966 aaKnown RBP13.96□□□□□ -0.18
ATRX-216ENST00000624403 ATMINO43313 823 aaPredicted RBP13.95□□□□□ -0.18
ATRX-216ENST00000624403 PYGBP11216 843 aa13.95□□□□□ -0.18
ATRX-216ENST00000624403 PPP2R1AP30153 589 aa13.95□□□□□ -0.18
ATRX-216ENST00000624403 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
ATRX-216ENST00000624403 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
ATRX-216ENST00000624403 USP32Q8NFA0 1604 aa13.94□□□□□ -0.18
ATRX-216ENST00000624403 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
ATRX-216ENST00000624403 A0A1W2PP64 1363 aa13.94□□□□□ -0.18
ATRX-216ENST00000624403 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
ATRX-216ENST00000624403 PTCH1Q13635 1447 aa13.93□□□□□ -0.18
ATRX-216ENST00000624403 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
ATRX-216ENST00000624403 XRN1Q8IZH2 1706 aaKnown RBP13.93□□□□□ -0.18
ATRX-216ENST00000624403 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
ATRX-216ENST00000624403 TERF2IPQ9NYB0 399 aa13.92□□□□□ -0.18
ATRX-216ENST00000624403 CABP1Q9NZU7 370 aa13.92□□□□□ -0.18
ATRX-216ENST00000624403 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.92□□□□□ -0.18
ATRX-216ENST00000624403 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
ATRX-216ENST00000624403 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
ATRX-216ENST00000624403 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
ATRX-216ENST00000624403 IFNL1Q8IU54 200 aa13.91□□□□□ -0.18
ATRX-216ENST00000624403 SGIP1Q9BQI5 828 aa13.91□□□□□ -0.18
ATRX-216ENST00000624403 BMP2KQ9NSY1 1161 aaPredicted RBP13.91□□□□□ -0.18
ATRX-216ENST00000624403 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
ATRX-216ENST00000624403 NUDT16Q96DE0 195 aaKnown RBP13.9□□□□□ -0.18
ATRX-216ENST00000624403 ATP7BP35670 1465 aa13.9□□□□□ -0.18
ATRX-216ENST00000624403 NSD2O96028 1365 aa13.89□□□□□ -0.19
ATRX-216ENST00000624403 KCNA6P17658 529 aa13.89□□□□□ -0.19
ATRX-216ENST00000624403 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
ATRX-216ENST00000624403 GSE1Q14687 1217 aa13.89□□□□□ -0.19
ATRX-216ENST00000624403 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
ATRX-216ENST00000624403 PRR36Q9H6K5 1346 aa13.89□□□□□ -0.19
ATRX-216ENST00000624403 NCKAP5LQ9HCH0 1330 aa13.89□□□□□ -0.19
ATRX-216ENST00000624403 KDM4FA0A1W2PPD8 638 aa13.87□□□□□ -0.19
ATRX-216ENST00000624403 CPSF1Q10570 1443 aaKnown RBP13.86□□□□□ -0.19
ATRX-216ENST00000624403 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
ATRX-216ENST00000624403 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
ATRX-216ENST00000624403 TIE1P35590 1138 aa13.85□□□□□ -0.19
ATRX-216ENST00000624403 INSRP06213 1382 aa13.84□□□□□ -0.19
ATRX-216ENST00000624403 FYB1O15117 783 aa13.84□□□□□ -0.19
ATRX-216ENST00000624403 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
ATRX-216ENST00000624403 GTF3C3Q9Y5Q9 886 aa13.84□□□□□ -0.19
ATRX-216ENST00000624403 CHD2O14647 1828 aaKnown RBP13.84□□□□□ -0.19
ATRX-216ENST00000624403 TOPAZ1Q8N9V7 1692 aa13.83□□□□□ -0.2
ATRX-216ENST00000624403 TTLL13PA6NNM8 815 aa13.83□□□□□ -0.2
ATRX-216ENST00000624403 GGNBP2Q9H3C7 697 aa13.83□□□□□ -0.2
ATRX-216ENST00000624403 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
ATRX-216ENST00000624403 BLMP54132 1417 aaPredicted RBP13.82□□□□□ -0.2
ATRX-216ENST00000624403 EDC4Q6P2E9 1401 aaKnown RBP13.82□□□□□ -0.2
ATRX-216ENST00000624403 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
ATRX-216ENST00000624403 PCDHB8Q9UN66 801 aa13.82□□□□□ -0.2
ATRX-216ENST00000624403 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
ATRX-216ENST00000624403 PLEKHG3A1L390 1219 aa13.81□□□□□ -0.2
ATRX-216ENST00000624403 WDR43Q15061 677 aaKnown RBP eCLIP13.81□□□□□ -0.2
ATRX-216ENST00000624403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.81□□□□□ -0.2
ATRX-216ENST00000624403 ADAMTS8Q9UP79 889 aa13.81□□□□□ -0.2
ATRX-216ENST00000624403 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
ATRX-216ENST00000624403 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
ATRX-216ENST00000624403 ANKRD26Q9UPS8 1709 aa13.8□□□□□ -0.2
ATRX-216ENST00000624403 KIF20BQ96Q89 1820 aa13.8□□□□□ -0.2
ATRX-216ENST00000624403 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
ATRX-216ENST00000624403 NWD1Q149M9 1564 aa13.79□□□□□ -0.2
ATRX-216ENST00000624403 MON2Q7Z3U7 1717 aa13.79□□□□□ -0.2
ATRX-216ENST00000624403 AKAP12Q02952 1782 aa13.79□□□□□ -0.2
ATRX-216ENST00000624403 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
ATRX-216ENST00000624403 MTHFSP49914 203 aa13.79□□□□□ -0.2
ATRX-216ENST00000624403 SLC39A7Q92504 469 aa13.79□□□□□ -0.2
ATRX-216ENST00000624403 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
ATRX-216ENST00000624403 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
ATRX-216ENST00000624403 C7P10643 843 aa13.78□□□□□ -0.2
ATRX-216ENST00000624403 HSPA2P54652 639 aa13.78□□□□□ -0.2
ATRX-216ENST00000624403 ACEP12821 1306 aa13.78□□□□□ -0.2
ATRX-216ENST00000624403 NME9Q86XW9 330 aa13.77□□□□□ -0.21
ATRX-216ENST00000624403 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
ATRX-216ENST00000624403 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.21
ATRX-216ENST00000624403 FMN2Q9NZ56 1722 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms