RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 PTPN5P54829 565 aa3.14□□□□□ -1.91
AP000648.3-201ENST00000623539 LCE2AQ5TA79 106 aaPredicted RBP3.14□□□□□ -1.91
AP000648.3-201ENST00000623539 PTK2Q05397 1052 aa3.14□□□□□ -1.91
AP000648.3-201ENST00000623539 C11orf16Q9NQ32 467 aa3.14□□□□□ -1.91
AP000648.3-201ENST00000623539 MYT1Q01538 1121 aa3.14□□□□□ -1.91
AP000648.3-201ENST00000623539 CFAP99D6REC4 459 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 S1PR4O95977 384 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 DHX9Q08211 1270 aaKnown RBP3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 WASHC4Q2M389 1173 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 NANOS1Q8WY41 292 aaKnown RBP3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 SMPD1P17405 629 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 PHTF2Q8N3S3 785 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 ZNF511Q8NB15 262 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 PRM3Q9NNZ6 103 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 LIMD1Q9UGP4 676 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 HRH3Q9Y5N1 445 aa3.13□□□□□ -1.91
AP000648.3-201ENST00000623539 WIPF1O43516 503 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 RFC5P40937 340 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 RNF20Q5VTR2 975 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 RNF19BQ6ZMZ0 732 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 PLEKHM2Q8IWE5 1019 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 STAG2Q8N3U4 1231 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 HELBQ8NG08 1087 aaPredicted RBP3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 NUDT12Q9BQG2 462 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 FKBPLQ9UIM3 349 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 BPHLQ86WA6 291 aaPredicted RBP3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 PRKD2Q9BZL6 878 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 TRIM32Q13049 653 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 PLA2G2CQ5R387 149 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 UNC93B1Q9H1C4 597 aa3.12□□□□□ -1.91
AP000648.3-201ENST00000623539 SPATA31C2B4DYI2 1134 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 SH3BP2P78314 561 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 SKOR1P84550 965 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 ZNF697Q5TEC3 545 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 NKX2-3Q8TAU0 364 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 ZNF330Q9Y3S2 320 aaPredicted RBP3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 NDUFB9Q9Y6M9 179 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 ADH1CP00326 375 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 NR1H3Q13133 447 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 MAP7D1Q3KQU3 841 aa3.11□□□□□ -1.91
AP000648.3-201ENST00000623539 GPR37L1O60883 481 aa3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 OCSTAMPQ9BR26 566 aa3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 ZBTB24O43167 697 aaPredicted RBP3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 RNF144AP50876 292 aaPredicted RBP3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 RTL5Q5HYW3 569 aaPredicted RBP3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 RC3H1Q5TC82 1133 aaKnown RBP3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 TRIM34Q9BYJ4 488 aa3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 NDUFV2P19404 249 aa3.1□□□□□ -1.91
AP000648.3-201ENST00000623539 PTCRAQ6ISU1 281 aaPredicted RBP3.09□□□□□ -1.91
AP000648.3-201ENST00000623539 ELOAQ14241 798 aaKnown RBP3.09□□□□□ -1.92
AP000648.3-201ENST00000623539 TRIM47Q96LD4 638 aa3.09□□□□□ -1.92
AP000648.3-201ENST00000623539 EFCC1Q9HA90 598 aa3.09□□□□□ -1.92
AP000648.3-201ENST00000623539 GAS2L2Q8NHY3 880 aa3.09□□□□□ -1.92
AP000648.3-201ENST00000623539 FAM117AQ9C073 453 aa3.09□□□□□ -1.92
AP000648.3-201ENST00000623539 HIRAP54198 1017 aaPredicted RBP3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 FAM161AQ3B820 660 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 ALYREFQ86V81 257 aaKnown RBP3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 FNBP4Q8N3X1 1017 aaPredicted RBP3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 XAGE2Q96GT9 111 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 AAASQ9NRG9 546 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 PCDHB15Q9Y5E8 787 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 LCE2BO14633 110 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 GRM5P41594 1212 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 TTLL12Q14166 644 aaPredicted RBP3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 FCF1Q9Y324 198 aaKnown RBP3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 EMILIN1Q9Y6C2 1016 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 TRAK2O60296 914 aa3.08□□□□□ -1.92
AP000648.3-201ENST00000623539 TLL1O43897 1013 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 COPS2P61201 443 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 SLC4A9Q96Q91 983 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 ERVK-9P63128 1117 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 PDZRN3Q9UPQ7 1066 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 GFRA3O60609 400 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 COL26A1Q96A83 441 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 SIRT1Q96EB6 747 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 ZBBXA8MT70 800 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 PGPEP1Q9NXJ5 209 aa3.07□□□□□ -1.92
AP000648.3-201ENST00000623539 TRAF7Q6Q0C0 670 aa3.06□□□□□ -1.92
AP000648.3-201ENST00000623539 SOS2Q07890 1332 aaPredicted RBP3.06□□□□□ -1.92
AP000648.3-201ENST00000623539 USP17L8P0C7I0 530 aa3.06□□□□□ -1.92
AP000648.3-201ENST00000623539 TREML4Q6UXN2 200 aa3.06□□□□□ -1.92
AP000648.3-201ENST00000623539 CYP4X1Q8N118 509 aa3.06□□□□□ -1.92
AP000648.3-201ENST00000623539 C1orf216Q8TAB5 229 aa3.06□□□□□ -1.92
AP000648.3-201ENST00000623539 ALG2Q9H553 416 aa3.06□□□□□ -1.92
AP000648.3-201ENST00000623539 MEIOBQ8N635 442 aa3.05□□□□□ -1.92
AP000648.3-201ENST00000623539 C6orf229H3BNL8 230 aa3.05□□□□□ -1.92
AP000648.3-201ENST00000623539 LAMC2Q13753 1193 aa3.05□□□□□ -1.92
AP000648.3-201ENST00000623539 FBXO31Q5XUX0 539 aaPredicted RBP3.05□□□□□ -1.92
AP000648.3-201ENST00000623539 MRGPRX2Q96LB1 330 aa3.05□□□□□ -1.92
AP000648.3-201ENST00000623539 MTFR1Q15390 333 aa3.04□□□□□ -1.92
AP000648.3-201ENST00000623539 C4orf48Q5BLP8 95 aa3.04□□□□□ -1.92
AP000648.3-201ENST00000623539 BAP1Q92560 729 aa3.04□□□□□ -1.92
AP000648.3-201ENST00000623539 AVENQ9NQS1 362 aaPredicted RBP3.04□□□□□ -1.92
AP000648.3-201ENST00000623539 GNRH1P01148 92 aa3.04□□□□□ -1.92
AP000648.3-201ENST00000623539 GRIP2Q9C0E4 1043 aa3.04□□□□□ -1.92
AP000648.3-201ENST00000623539 SPINT1O43278 529 aa3.04□□□□□ -1.92
AP000648.3-201ENST00000623539 TIMP2P16035 220 aa3.03□□□□□ -1.92
AP000648.3-201ENST00000623539 PUS10Q3MIT2 529 aaKnown RBP3.03□□□□□ -1.92
AP000648.3-201ENST00000623539 MTMR14Q8NCE2 650 aa3.03□□□□□ -1.92
AP000648.3-201ENST00000623539 PRDM9Q9NQV7 894 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms