RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 UBTFP17480 764 aaKnown RBP11.63□□□□□ -0.55
RAB28P4-201ENST00000622233 RETREG3Q86VR2 466 aa11.63□□□□□ -0.55
RAB28P4-201ENST00000622233 LRRN4Q8WUT4 740 aa11.63□□□□□ -0.55
RAB28P4-201ENST00000622233 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
RAB28P4-201ENST00000622233 TLL1O43897 1013 aa11.62□□□□□ -0.55
RAB28P4-201ENST00000622233 NR1I2O75469 434 aa11.62□□□□□ -0.55
RAB28P4-201ENST00000622233 Q3C1V9 767 aa11.62□□□□□ -0.55
RAB28P4-201ENST00000622233 SPNS2Q8IVW8 549 aa11.62□□□□□ -0.55
RAB28P4-201ENST00000622233 HMX1Q9NP08 348 aaPredicted RBP11.62□□□□□ -0.55
RAB28P4-201ENST00000622233 MTRQ99707 1265 aa11.61□□□□□ -0.55
RAB28P4-201ENST00000622233 ADAMTS12P58397 1594 aa11.61□□□□□ -0.55
RAB28P4-201ENST00000622233 ZNF516Q92618 1163 aa11.6□□□□□ -0.55
RAB28P4-201ENST00000622233 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
RAB28P4-201ENST00000622233 HELBQ8NG08 1087 aaPredicted RBP11.59□□□□□ -0.55
RAB28P4-201ENST00000622233 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
RAB28P4-201ENST00000622233 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
RAB28P4-201ENST00000622233 SYNJ2O15056 1496 aa11.58□□□□□ -0.56
RAB28P4-201ENST00000622233 PRDM9Q9NQV7 894 aa11.58□□□□□ -0.56
RAB28P4-201ENST00000622233 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 NYAP1Q6ZVC0 841 aa11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 FAM160A2Q8N612 972 aaPredicted RBP11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 RNF166Q96A37 237 aaPredicted RBP11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 SPSB2Q99619 263 aa11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 SALL2Q9Y467 1007 aaPredicted RBP11.57□□□□□ -0.56
RAB28P4-201ENST00000622233 ZPR1O75312 459 aa11.56□□□□□ -0.56
RAB28P4-201ENST00000622233 GJD4Q96KN9 370 aaPredicted RBP11.56□□□□□ -0.56
RAB28P4-201ENST00000622233 CLASP1Q7Z460 1538 aa11.55□□□□□ -0.56
RAB28P4-201ENST00000622233 TRIM34Q9BYJ4 488 aa11.55□□□□□ -0.56
RAB28P4-201ENST00000622233 GDPD2Q9HCC8 539 aa11.55□□□□□ -0.56
RAB28P4-201ENST00000622233 TBC1D2BQ9UPU7 963 aa11.54□□□□□ -0.56
RAB28P4-201ENST00000622233 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
RAB28P4-201ENST00000622233 GRIN2AQ12879 1464 aa11.52□□□□□ -0.56
RAB28P4-201ENST00000622233 IL21Q9HBE4 155 aa11.52□□□□□ -0.57
RAB28P4-201ENST00000622233 CUL7Q14999 1698 aa11.52□□□□□ -0.57
RAB28P4-201ENST00000622233 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.57
RAB28P4-201ENST00000622233 RIMBP3CA6NJZ7 1639 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 RIMBP3BA6NNM3 1639 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 RIMBP3Q9UFD9 1639 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 A6NJR5 290 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 JUNDP17535 347 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 NR6A1Q15406 480 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 LYPD8Q6UX82 237 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 KIF27Q86VH2 1401 aa11.51□□□□□ -0.57
RAB28P4-201ENST00000622233 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
RAB28P4-201ENST00000622233 RAD21O60216 631 aa11.5□□□□□ -0.57
RAB28P4-201ENST00000622233 ADH1BP00325 375 aa11.5□□□□□ -0.57
RAB28P4-201ENST00000622233 DESI1Q6ICB0 168 aa11.5□□□□□ -0.57
RAB28P4-201ENST00000622233 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
RAB28P4-201ENST00000622233 GPR37L1O60883 481 aa11.49□□□□□ -0.57
RAB28P4-201ENST00000622233 ABL2P42684 1182 aa11.49□□□□□ -0.57
RAB28P4-201ENST00000622233 MSS51Q4VC12 460 aa11.49□□□□□ -0.57
RAB28P4-201ENST00000622233 PROSER2Q86WR7 435 aaPredicted RBP11.49□□□□□ -0.57
RAB28P4-201ENST00000622233 FNBP4Q8N3X1 1017 aaPredicted RBP11.48□□□□□ -0.57
RAB28P4-201ENST00000622233 HCSTQ9UBK5 93 aa11.48□□□□□ -0.57
RAB28P4-201ENST00000622233 NUP160Q12769 1436 aa11.48□□□□□ -0.57
RAB28P4-201ENST00000622233 ARHGEF11O15085 1522 aa11.48□□□□□ -0.57
RAB28P4-201ENST00000622233 TRAK2O60296 914 aa11.47□□□□□ -0.57
RAB28P4-201ENST00000622233 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
RAB28P4-201ENST00000622233 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
RAB28P4-201ENST00000622233 C1orf115Q9H7X2 142 aa11.47□□□□□ -0.57
RAB28P4-201ENST00000622233 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
RAB28P4-201ENST00000622233 SOCS7O14512 581 aa11.46□□□□□ -0.57
RAB28P4-201ENST00000622233 MMP16P51512 607 aa11.45□□□□□ -0.58
RAB28P4-201ENST00000622233 MMRN1Q13201 1228 aa11.45□□□□□ -0.58
RAB28P4-201ENST00000622233 NDUFB9Q9Y6M9 179 aa11.45□□□□□ -0.58
RAB28P4-201ENST00000622233 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
RAB28P4-201ENST00000622233 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
RAB28P4-201ENST00000622233 IGF1RP08069 1367 aa11.44□□□□□ -0.58
RAB28P4-201ENST00000622233 S1PR4O95977 384 aa11.44□□□□□ -0.58
RAB28P4-201ENST00000622233 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
RAB28P4-201ENST00000622233 IRF5Q13568 498 aa11.44□□□□□ -0.58
RAB28P4-201ENST00000622233 PTPRNQ16849 979 aa11.44□□□□□ -0.58
RAB28P4-201ENST00000622233 SLC6A16Q9GZN6 736 aa11.44□□□□□ -0.58
RAB28P4-201ENST00000622233 CTHP32929 405 aa11.43□□□□□ -0.58
RAB28P4-201ENST00000622233 ZNF777Q9ULD5 760 aaPredicted RBP11.43□□□□□ -0.58
RAB28P4-201ENST00000622233 NUDT12Q9BQG2 462 aa11.42□□□□□ -0.58
RAB28P4-201ENST00000622233 APBB1O00213 710 aa11.41□□□□□ -0.58
RAB28P4-201ENST00000622233 CCNYL3P0C7X3 344 aa11.41□□□□□ -0.58
RAB28P4-201ENST00000622233 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
RAB28P4-201ENST00000622233 POM121CA8CG34 1229 aa11.4□□□□□ -0.58
RAB28P4-201ENST00000622233 PPEF1O14829 653 aaPredicted RBP11.4□□□□□ -0.58
RAB28P4-201ENST00000622233 KCNC4Q03721 635 aa11.4□□□□□ -0.58
RAB28P4-201ENST00000622233 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
RAB28P4-201ENST00000622233 PTCRAQ6ISU1 281 aaPredicted RBP11.39□□□□□ -0.59
RAB28P4-201ENST00000622233 PRM3Q9NNZ6 103 aa11.39□□□□□ -0.59
RAB28P4-201ENST00000622233 EVA1BQ9NVM1 165 aa11.39□□□□□ -0.59
RAB28P4-201ENST00000622233 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
RAB28P4-201ENST00000622233 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
RAB28P4-201ENST00000622233 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
RAB28P4-201ENST00000622233 ERCC6L2Q5T890 1561 aa11.37□□□□□ -0.59
RAB28P4-201ENST00000622233 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
RAB28P4-201ENST00000622233 VAC14Q08AM6 782 aa11.36□□□□□ -0.59
RAB28P4-201ENST00000622233 FCF1Q9Y324 198 aaKnown RBP11.36□□□□□ -0.59
RAB28P4-201ENST00000622233 KIAA0586Q9BVV6 1533 aa11.35□□□□□ -0.59
RAB28P4-201ENST00000622233 CTTNBP2Q8WZ74 1663 aa11.34□□□□□ -0.59
RAB28P4-201ENST00000622233 ARID3AQ99856 593 aa11.34□□□□□ -0.59
RAB28P4-201ENST00000622233 FKBPLQ9UIM3 349 aa11.34□□□□□ -0.59
RAB28P4-201ENST00000622233 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms