RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 ZNF530Q6P9A1 599 aaPredicted RBP12.68□□□□□ -0.38
COL25A1-209ENST00000622134 NUDT16Q96DE0 195 aaKnown RBP12.68□□□□□ -0.38
COL25A1-209ENST00000622134 AAMPQ13685 434 aa12.68□□□□□ -0.38
COL25A1-209ENST00000622134 NOM1Q5C9Z4 860 aaKnown RBP12.68□□□□□ -0.38
COL25A1-209ENST00000622134 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
COL25A1-209ENST00000622134 PDE4CQ08493 712 aa12.67□□□□□ -0.38
COL25A1-209ENST00000622134 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
COL25A1-209ENST00000622134 ELL2O00472 640 aaPredicted RBP12.67□□□□□ -0.38
COL25A1-209ENST00000622134 UHRF1BP1LA0JNW5 1464 aa12.67□□□□□ -0.38
COL25A1-209ENST00000622134 WDR62O43379 1518 aa12.67□□□□□ -0.38
COL25A1-209ENST00000622134 IFIT2P09913 472 aaKnown RBP12.67□□□□□ -0.38
COL25A1-209ENST00000622134 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
COL25A1-209ENST00000622134 PLIN1O60240 522 aa12.66□□□□□ -0.38
COL25A1-209ENST00000622134 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
COL25A1-209ENST00000622134 ABCC10Q5T3U5 1492 aa12.66□□□□□ -0.38
COL25A1-209ENST00000622134 DDX54Q8TDD1 881 aaKnown RBP12.66□□□□□ -0.38
COL25A1-209ENST00000622134 APAF1O14727 1248 aa12.65□□□□□ -0.38
COL25A1-209ENST00000622134 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
COL25A1-209ENST00000622134 NUCB2P80303 420 aa12.65□□□□□ -0.38
COL25A1-209ENST00000622134 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
COL25A1-209ENST00000622134 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.38
COL25A1-209ENST00000622134 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
COL25A1-209ENST00000622134 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
COL25A1-209ENST00000622134 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
COL25A1-209ENST00000622134 TPM3P06753 285 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 HMOX1P09601 288 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 TPM4P67936 248 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 CALRP27797 417 aaKnown RBP12.64□□□□□ -0.39
COL25A1-209ENST00000622134 MTHFSP49914 203 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 IDI1Q13907 227 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 PPP1R1BQ9UD71 204 aaPredicted RBP12.64□□□□□ -0.39
COL25A1-209ENST00000622134 STARD3NLO95772 234 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 GNAI3P08754 354 aa12.64□□□□□ -0.39
COL25A1-209ENST00000622134 ERC2O15083 957 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 TRDNQ13061 729 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 A2MP01023 1474 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 CCDC7Q96M83 1385 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 AMOTQ4VCS5 1084 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 CWC15Q9P013 229 aaKnown RBP12.63□□□□□ -0.39
COL25A1-209ENST00000622134 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 UQCRHP07919 91 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 ZSCAN30Q86W11 494 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 RASSF8Q8NHQ8 419 aa12.63□□□□□ -0.39
COL25A1-209ENST00000622134 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
COL25A1-209ENST00000622134 CLCN1P35523 988 aa12.62□□□□□ -0.39
COL25A1-209ENST00000622134 VPS53Q5VIR6 699 aa12.62□□□□□ -0.39
COL25A1-209ENST00000622134 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
COL25A1-209ENST00000622134 KDM5BQ9UGL1 1544 aa12.61□□□□□ -0.39
COL25A1-209ENST00000622134 WDHD1O75717 1129 aaPredicted RBP12.61□□□□□ -0.39
COL25A1-209ENST00000622134 RAPGEF6Q8TEU7 1601 aa12.61□□□□□ -0.39
COL25A1-209ENST00000622134 ZC3H6P61129 1189 aaKnown RBP12.61□□□□□ -0.39
COL25A1-209ENST00000622134 C22orf23Q9BZE7 217 aa12.61□□□□□ -0.39
COL25A1-209ENST00000622134 EXOC5O00471 708 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 RNF20Q5VTR2 975 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 ADAMTS2O95450 1211 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 UBTFL1P0CB47 393 aaPredicted RBP12.6□□□□□ -0.39
COL25A1-209ENST00000622134 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
COL25A1-209ENST00000622134 ADAMTS12P58397 1594 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 ATP10BO94823 1461 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
COL25A1-209ENST00000622134 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
COL25A1-209ENST00000622134 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
COL25A1-209ENST00000622134 ARGLU1Q9NWB6 273 aaPredicted RBP12.6□□□□□ -0.39
COL25A1-209ENST00000622134 BRD4O60885 1362 aaPredicted RBP12.59□□□□□ -0.39
COL25A1-209ENST00000622134 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
COL25A1-209ENST00000622134 PRKAR2BP31323 418 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 ERICH2A1L162 156 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 WASLO00401 505 aaPredicted RBP12.59□□□□□ -0.39
COL25A1-209ENST00000622134 DZIP1LQ8IYY4 767 aaKnown RBP12.59□□□□□ -0.39
COL25A1-209ENST00000622134 KIF7Q2M1P5 1343 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 MCM4P33991 863 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 SULT6B1Q6IMI4 303 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 TMOD3Q9NYL9 352 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 ABCC5O15440 1437 aa12.59□□□□□ -0.39
COL25A1-209ENST00000622134 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
COL25A1-209ENST00000622134 NUP160Q12769 1436 aa12.58□□□□□ -0.4
COL25A1-209ENST00000622134 NCOA1Q15788 1441 aa12.58□□□□□ -0.4
COL25A1-209ENST00000622134 CCAR1Q8IX12 1150 aaKnown RBP12.58□□□□□ -0.4
COL25A1-209ENST00000622134 SLC3A2P08195 630 aaKnown RBP12.58□□□□□ -0.4
COL25A1-209ENST00000622134 TEX13AQ9BXU3 409 aaPredicted RBP12.58□□□□□ -0.4
COL25A1-209ENST00000622134 FOXO3O43524 673 aa12.57□□□□□ -0.4
COL25A1-209ENST00000622134 NECTIN2Q92692 538 aa12.57□□□□□ -0.4
COL25A1-209ENST00000622134 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
COL25A1-209ENST00000622134 DUOX2Q9NRD8 1548 aa12.56□□□□□ -0.4
COL25A1-209ENST00000622134 ZPR1O75312 459 aa12.56□□□□□ -0.4
COL25A1-209ENST00000622134 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
COL25A1-209ENST00000622134 REC8O95072 547 aa12.56□□□□□ -0.4
COL25A1-209ENST00000622134 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
COL25A1-209ENST00000622134 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
COL25A1-209ENST00000622134 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
COL25A1-209ENST00000622134 PTPN23Q9H3S7 1636 aa12.56□□□□□ -0.4
COL25A1-209ENST00000622134 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms