RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 MS4A4AQ96JQ5 239 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 ADGBQ8N7X0 1667 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 PTPRGP23470 1445 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 C11orf95C9JLR9 678 aaPredicted RBP5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 PRR29P0C7W0 189 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 IFNL1Q8IU54 200 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 MARCH6O60337 910 aa5.38□□□□□ -1.55
UBE2D3-233ENST00000618836 PLXNC1O60486 1568 aa5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 A2ML1A8K2U0 1454 aa5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 IRF5Q13568 498 aa5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 PHF8Q9UPP1 1060 aa5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 FOXD4L6Q3SYB3 417 aaPredicted RBP5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 RTL5Q5HYW3 569 aaPredicted RBP5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 FOXD4L3Q6VB84 417 aaPredicted RBP5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 FAM9BQ8IZU0 186 aa5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 ZC3H15Q8WU90 426 aaKnown RBP5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 RBM33Q96EV2 1170 aaKnown RBP5.37□□□□□ -1.55
UBE2D3-233ENST00000618836 TRIM44Q96DX7 344 aaPredicted RBP5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 ZNF830Q96NB3 372 aaPredicted RBP5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 CCDC61Q9Y6R9 512 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 MLLT3P42568 568 aaPredicted RBP5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 C1QTNF8P60827 252 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 EFCAB3Q8N7B9 438 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 FBXO22Q8NEZ5 403 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 HDAC5Q9UQL6 1122 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 MROH1Q8NDA8 1641 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 ATAD2Q6PL18 1390 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 CARD10Q9BWT7 1032 aa5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 NOP58Q9Y2X3 529 aaKnown RBP5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.36□□□□□ -1.55
UBE2D3-233ENST00000618836 DENND4BO75064 1496 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 MKRN3Q13064 507 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 GSE1Q14687 1217 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 EGFL6Q8IUX8 553 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 SIRT1Q96EB6 747 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 MTA3Q9BTC8 594 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 NEXMIFQ5QGS0 1516 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 UNCXA6NJT0 531 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 RALBP1Q15311 655 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 AATKQ6ZMQ8 1374 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 NINLQ9Y2I6 1382 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 ABCA6Q8N139 1617 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 APBB1IPQ7Z5R6 666 aaPredicted RBP5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 CACTIN-AS1Q8N1I8 211 aa5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 ANP32BQ92688 251 aaKnown RBP5.35□□□□□ -1.55
UBE2D3-233ENST00000618836 BRWD3Q6RI45 1802 aa5.34□□□□□ -1.55
UBE2D3-233ENST00000618836 TIAM1Q13009 1591 aa5.34□□□□□ -1.55
UBE2D3-233ENST00000618836 CASC1Q6TDU7 716 aa5.34□□□□□ -1.55
UBE2D3-233ENST00000618836 TSPAN18Q96SJ8 248 aa5.34□□□□□ -1.55
UBE2D3-233ENST00000618836 UBA5Q9GZZ9 404 aa5.34□□□□□ -1.55
UBE2D3-233ENST00000618836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.34□□□□□ -1.55
UBE2D3-233ENST00000618836 ZRANB1Q9UGI0 708 aa5.34□□□□□ -1.55
UBE2D3-233ENST00000618836 NUP188Q5SRE5 1749 aa5.34□□□□□ -1.56
UBE2D3-233ENST00000618836 CDCA8Q53HL2 280 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 RBM26Q5T8P6 1007 aaKnown RBP5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 MAMSTRQ6ZN01 415 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 TMEM51Q9NW97 253 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 ZBTB47Q9UFB7 747 aaPredicted RBP5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 SPATA31A6Q5VVP1 1343 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 MAP3K13O43283 966 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 PPFIA4O75335 1185 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 OTUD6BQ8N6M0 293 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 EVI5LQ96CN4 794 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 WDR90Q96KV7 1748 aa5.33□□□□□ -1.56
UBE2D3-233ENST00000618836 EXOC5O00471 708 aa5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 SETDB1Q15047 1291 aa5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 GORABQ5T7V8 394 aa5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 CABP2Q9NPB3 220 aa5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 RBM27Q9P2N5 1060 aaKnown RBP5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 ARIH1Q9Y4X5 557 aaPredicted RBP5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 ADAMTS7Q9UKP4 1686 aa5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 CARMIL2Q6F5E8 1435 aa5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 ZNF335Q9H4Z2 1342 aaPredicted RBP5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 IL27Q8NEV9 243 aa5.32□□□□□ -1.56
UBE2D3-233ENST00000618836 ZNF772Q68DY9 489 aaPredicted RBP5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 SPDYE1Q8NFV5 336 aaPredicted RBP5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 NUB1Q9Y5A7 615 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 NBPF9Q3BBW0 867 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 KRBA2Q6ZNG9 492 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 RETREG2Q8NC44 543 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 CAMTA1Q9Y6Y1 1673 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 PTPN23Q9H3S7 1636 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 SOX12O15370 315 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 TRAK2O60296 914 aa5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 IRX3P78415 501 aaPredicted RBP5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 HIRIP3Q9BW71 556 aaPredicted RBP5.31□□□□□ -1.56
UBE2D3-233ENST00000618836 CLEC4GQ6UXB4 293 aa5.3□□□□□ -1.56
UBE2D3-233ENST00000618836 ARHGEF1Q92888 912 aaKnown RBP5.3□□□□□ -1.56
UBE2D3-233ENST00000618836 FBXW7Q969H0 707 aa5.3□□□□□ -1.56
UBE2D3-233ENST00000618836 CALRP27797 417 aaKnown RBP5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 JCADQ9P266 1359 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 SAMD9Q5K651 1589 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 PITPNM2Q9BZ72 1349 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 TNS2Q63HR2 1409 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 A6NJR5 290 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 IRF6O14896 467 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 NRDCO43847 1150 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 MICAL1Q8TDZ2 1067 aa5.29□□□□□ -1.56
UBE2D3-233ENST00000618836 MLH3Q9UHC1 1453 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms