RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 DNAAF4Q8WXU2 420 aa11.06□□□□□ -0.64
COL12A1-211ENST00000615798 PTPN23Q9H3S7 1636 aa11.06□□□□□ -0.64
COL12A1-211ENST00000615798 FOXD4L1Q9NU39 408 aa11.06□□□□□ -0.64
COL12A1-211ENST00000615798 GOLIM4O00461 696 aa11.06□□□□□ -0.64
COL12A1-211ENST00000615798 CCDC112Q8NEF3 446 aa11.06□□□□□ -0.64
COL12A1-211ENST00000615798 GIGYF2Q6Y7W6 1299 aaKnown RBP11.06□□□□□ -0.64
COL12A1-211ENST00000615798 NAP1L3Q99457 506 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-211ENST00000615798 LETM1O95202 739 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-211ENST00000615798 SH3BGRP55822 239 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-211ENST00000615798 FOXD4L5Q5VV16 416 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-211ENST00000615798 FOXD4L4Q8WXT5 416 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-211ENST00000615798 SRPK2P78362 688 aaKnown RBP11.05□□□□□ -0.64
COL12A1-211ENST00000615798 DHX37Q8IY37 1157 aaKnown RBP11.05□□□□□ -0.64
COL12A1-211ENST00000615798 CFAP45Q9UL16 551 aa11.05□□□□□ -0.64
COL12A1-211ENST00000615798 NAIPQ13075 1403 aa11.05□□□□□ -0.64
COL12A1-211ENST00000615798 EPRSP07814 1512 aaKnown RBP11.04□□□□□ -0.64
COL12A1-211ENST00000615798 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 ZHX1Q9UKY1 873 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-211ENST00000615798 DAPK1P53355 1430 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 ANKRD62A6NC57 917 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 PRDM10Q9NQV6 1147 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 TXLNBQ8N3L3 684 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 PDE4AP27815 886 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 SOGA3Q5TF21 947 aa11.04□□□□□ -0.64
COL12A1-211ENST00000615798 MARCH6O60337 910 aa11.03□□□□□ -0.64
COL12A1-211ENST00000615798 KIF3BO15066 747 aa11.03□□□□□ -0.64
COL12A1-211ENST00000615798 SMARCE1Q969G3 411 aa11.03□□□□□ -0.64
COL12A1-211ENST00000615798 DDX23Q9BUQ8 820 aaKnown RBP11.03□□□□□ -0.64
COL12A1-211ENST00000615798 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-211ENST00000615798 NEUROD2Q15784 382 aa11.03□□□□□ -0.64
COL12A1-211ENST00000615798 BMS1Q14692 1282 aaKnown RBP11.03□□□□□ -0.64
COL12A1-211ENST00000615798 FOXD1Q16676 465 aa11.02□□□□□ -0.64
COL12A1-211ENST00000615798 OLFM4Q6UX06 510 aa11.02□□□□□ -0.64
COL12A1-211ENST00000615798 BRPF3Q9ULD4 1205 aa11.02□□□□□ -0.64
COL12A1-211ENST00000615798 DDX19BQ9UMR2 479 aa11.02□□□□□ -0.64
COL12A1-211ENST00000615798 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-211ENST00000615798 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL12A1-211ENST00000615798 ITSN2Q9NZM3 1697 aa11.02□□□□□ -0.65
COL12A1-211ENST00000615798 FAM184AQ8NB25 1140 aa11.02□□□□□ -0.65
COL12A1-211ENST00000615798 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
COL12A1-211ENST00000615798 MAP9Q49MG5 647 aa11.02□□□□□ -0.65
COL12A1-211ENST00000615798 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
COL12A1-211ENST00000615798 RNF187Q5TA31 235 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-211ENST00000615798 CTTNBP2Q8WZ74 1663 aa11.02□□□□□ -0.65
COL12A1-211ENST00000615798 RTF1Q92541 710 aaKnown RBP11.01□□□□□ -0.65
COL12A1-211ENST00000615798 NPHP1O15259 732 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 GBP3Q9H0R5 595 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 CHMP5Q9NZZ3 219 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 IBSPP21815 317 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-211ENST00000615798 ZBTB17Q13105 803 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 ZFYP08048 801 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-211ENST00000615798 TAX1BP1Q86VP1 789 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 EPS15P42566 896 aa11.01□□□□□ -0.65
COL12A1-211ENST00000615798 ANKRD18BA2A2Z9 1011 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 TTC31Q49AM3 519 aaPredicted RBP11□□□□□ -0.65
COL12A1-211ENST00000615798 MCM3P25205 808 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
COL12A1-211ENST00000615798 DDX46Q7L014 1031 aaKnown RBP11□□□□□ -0.65
COL12A1-211ENST00000615798 TMCO3Q6UWJ1 677 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 NOL3O60936 208 aaKnown RBP11□□□□□ -0.65
COL12A1-211ENST00000615798 ZKSCAN2Q63HK3 967 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 NUCB2P80303 420 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 PDILTQ8N807 584 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 SMC4Q9NTJ3 1288 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 MAP3K7CLP57077 242 aa11□□□□□ -0.65
COL12A1-211ENST00000615798 MAGI1Q96QZ7 1491 aaPredicted RBP11□□□□□ -0.65
COL12A1-211ENST00000615798 KIF14Q15058 1648 aa10.99□□□□□ -0.65
COL12A1-211ENST00000615798 TXLNAP40222 546 aa10.99□□□□□ -0.65
COL12A1-211ENST00000615798 HNRNPMP52272 730 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL12A1-211ENST00000615798 PANK3Q9H999 370 aa10.99□□□□□ -0.65
COL12A1-211ENST00000615798 RPRD2Q5VT52 1461 aaKnown RBP10.99□□□□□ -0.65
COL12A1-211ENST00000615798 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
COL12A1-211ENST00000615798 AKAP17AQ02040 695 aaKnown RBP10.99□□□□□ -0.65
COL12A1-211ENST00000615798 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
COL12A1-211ENST00000615798 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
COL12A1-211ENST00000615798 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
COL12A1-211ENST00000615798 CEP83Q9Y592 693 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 CCDC6Q16204 474 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 SH2D4BQ5SQS7 431 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 FEZ2Q9UHY8 353 aaPredicted RBP10.98□□□□□ -0.65
COL12A1-211ENST00000615798 ZWINTO95229 277 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 PLCD3Q8N3E9 789 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 LUC7LQ9NQ29 371 aaKnown RBP10.98□□□□□ -0.65
COL12A1-211ENST00000615798 TSPY26PQ9H489 355 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 IVLP07476 585 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 OFD1O75665 1012 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 CCDC174Q6PII3 467 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 VPS53Q5VIR6 699 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
COL12A1-211ENST00000615798 KIF2AO00139 706 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-211ENST00000615798 PPFIBP2Q8ND30 876 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 C6orf163Q5TEZ5 329 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 ARHGAP5Q13017 1502 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 PDE3AQ14432 1141 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 NESP48681 1621 aa10.97□□□□□ -0.65
COL12A1-211ENST00000615798 SYCP1Q15431 976 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms