RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CCDC91Q7Z6B0 441 aa12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 BCL2L13Q9BXK5 485 aa12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 RAB3IL1Q8TBN0 382 aa12.9□□□□□ -0.34
CNTNAP3B-211ENST00000612828 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
CNTNAP3B-211ENST00000612828 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
CNTNAP3B-211ENST00000612828 WASHC2AQ641Q2 1341 aa12.9□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CCDC160A6NGH7 325 aa12.9□□□□□ -0.34
CNTNAP3B-211ENST00000612828 HOOK1Q9UJC3 728 aaKnown RBP12.9□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CCDC89Q8N998 374 aa12.9□□□□□ -0.35
CNTNAP3B-211ENST00000612828 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.35
CNTNAP3B-211ENST00000612828 TRIM21P19474 475 aaKnown RBP12.89□□□□□ -0.35
CNTNAP3B-211ENST00000612828 PANK3Q9H999 370 aa12.89□□□□□ -0.35
CNTNAP3B-211ENST00000612828 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
CNTNAP3B-211ENST00000612828 KIF7Q2M1P5 1343 aa12.89□□□□□ -0.35
CNTNAP3B-211ENST00000612828 KIAA0754O94854 1291 aa12.88□□□□□ -0.35
CNTNAP3B-211ENST00000612828 PSMC4P43686 418 aa12.88□□□□□ -0.35
CNTNAP3B-211ENST00000612828 ZNF644Q9H582 1327 aaPredicted RBP12.87□□□□□ -0.35
CNTNAP3B-211ENST00000612828 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
CNTNAP3B-211ENST00000612828 CPLX1O14810 134 aa12.87□□□□□ -0.35
CNTNAP3B-211ENST00000612828 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
CNTNAP3B-211ENST00000612828 NUTM2DQ5VT03 806 aaPredicted RBP12.87□□□□□ -0.35
CNTNAP3B-211ENST00000612828 WHAMMQ8TF30 809 aa12.87□□□□□ -0.35
CNTNAP3B-211ENST00000612828 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
CNTNAP3B-211ENST00000612828 NOP9Q86U38 636 aaKnown RBP12.86□□□□□ -0.35
CNTNAP3B-211ENST00000612828 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
CNTNAP3B-211ENST00000612828 ZBTB41Q5SVQ8 909 aa12.86□□□□□ -0.35
CNTNAP3B-211ENST00000612828 GGT6Q6P531 493 aa12.86□□□□□ -0.35
CNTNAP3B-211ENST00000612828 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
CNTNAP3B-211ENST00000612828 CFAP65Q6ZU64 1925 aaKnown RBP12.86□□□□□ -0.35
CNTNAP3B-211ENST00000612828 SLU7O95391 586 aaKnown RBP12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 FEZ1Q99689 392 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 PPME1Q9Y570 386 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 PDE3BQ13370 1112 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 NECTIN2Q92692 538 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 KIF21BO75037 1637 aa12.85□□□□□ -0.35
CNTNAP3B-211ENST00000612828 ZNHIT6Q9NWK9 470 aaKnown RBP12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 IGF1RP08069 1367 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 RSPH3Q86UC2 560 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 OTUD6BQ8N6M0 293 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 USP47Q96K76 1375 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 FERP16591 822 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 RWDD1Q9H446 243 aaPredicted RBP12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 SLC9A5Q14940 896 aa12.84□□□□□ -0.35
CNTNAP3B-211ENST00000612828 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.35
CNTNAP3B-211ENST00000612828 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ATAD2BQ9ULI0 1458 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 MS4A1P11836 297 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 GOLGA6L9A6NEM1 432 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 STK31Q9BXU1 1019 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 CWC15Q9P013 229 aaKnown RBP12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 SIRT1Q96EB6 747 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
CNTNAP3B-211ENST00000612828 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 MAGEC2Q9UBF1 373 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 LIG1P18858 919 aa12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 DAAM2Q86T65 1068 aa12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 TRDNQ13061 729 aa12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 APAF1O14727 1248 aa12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 NAP1L3Q99457 506 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ZFYVE1Q9HBF4 777 aa12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
CNTNAP3B-211ENST00000612828 HSP90AA5PQ58FG0 334 aa12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 CCDC129Q6ZRS4 1044 aa12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 CTNNBL1Q8WYA6 563 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 DEF6Q9H4E7 631 aa12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 LRRFIP2Q9Y608 721 aaKnown RBP12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 TPD52P55327 224 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 SPAG9O60271 1321 aaKnown RBP12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 EPB41L2O43491 1005 aaKnown RBP12.81□□□□□ -0.36
CNTNAP3B-211ENST00000612828 CPLX2Q6PUV4 134 aaKnown RBP12.8□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
CNTNAP3B-211ENST00000612828 CADPSQ9ULU8 1353 aa12.8□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
CNTNAP3B-211ENST00000612828 TBC1D12O60347 775 aa12.79□□□□□ -0.36
CNTNAP3B-211ENST00000612828 GPATCH11Q8N954 259 aa12.79□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ANKRD18BA2A2Z9 1011 aa12.79□□□□□ -0.36
CNTNAP3B-211ENST00000612828 PRPF40AO75400 957 aaKnown RBP12.79□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ELL2O00472 640 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms