RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 PRDM11Q9NQV5 511 aa22.19■■□□□ 1.14
SSBP4-214ENST00000607020 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
SSBP4-214ENST00000607020 ADGRB2O60241 1585 aa22.19■■□□□ 1.14
SSBP4-214ENST00000607020 ABCA3Q99758 1704 aa22.19■■□□□ 1.14
SSBP4-214ENST00000607020 SPATA31A1Q5TZJ5 1347 aa22.18■■□□□ 1.14
SSBP4-214ENST00000607020 EZH2Q15910 746 aaKnown RBP22.18■■□□□ 1.14
SSBP4-214ENST00000607020 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
SSBP4-214ENST00000607020 NRAPQ86VF7 1730 aa22.17■■□□□ 1.14
SSBP4-214ENST00000607020 NGDNQ8NEJ9 315 aaKnown RBP22.17■■□□□ 1.14
SSBP4-214ENST00000607020 COL14A1Q05707 1796 aaKnown RBP22.17■■□□□ 1.14
SSBP4-214ENST00000607020 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-214ENST00000607020 STAC3Q96MF2 364 aa22.16■■□□□ 1.14
SSBP4-214ENST00000607020 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
SSBP4-214ENST00000607020 PARD3Q8TEW0 1356 aa22.15■■□□□ 1.14
SSBP4-214ENST00000607020 TRPM3Q9HCF6 1732 aaPredicted RBP22.15■■□□□ 1.14
SSBP4-214ENST00000607020 TULP4Q9NRJ4 1543 aa22.14■■□□□ 1.13
SSBP4-214ENST00000607020 PAK3O75914 559 aaPredicted RBP22.13■■□□□ 1.13
SSBP4-214ENST00000607020 TRIM37O94972 964 aa22.13■■□□□ 1.13
SSBP4-214ENST00000607020 ALS2Q96Q42 1657 aa22.13■■□□□ 1.13
SSBP4-214ENST00000607020 THSD7AQ9UPZ6 1657 aa22.12■■□□□ 1.13
SSBP4-214ENST00000607020 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
SSBP4-214ENST00000607020 KIAA0232Q92628 1395 aa22.12■■□□□ 1.13
SSBP4-214ENST00000607020 APBA3O96018 575 aa22.1■■□□□ 1.13
SSBP4-214ENST00000607020 RGPD1P0DJD0 1748 aa22.09■■□□□ 1.13
SSBP4-214ENST00000607020 CHRNA2Q15822 529 aa22.09■■□□□ 1.13
SSBP4-214ENST00000607020 NUDT16Q96DE0 195 aaKnown RBP22.09■■□□□ 1.13
SSBP4-214ENST00000607020 STRN4Q9NRL3 753 aa22.07■■□□□ 1.12
SSBP4-214ENST00000607020 ZC3H6P61129 1189 aaKnown RBP22.06■■□□□ 1.12
SSBP4-214ENST00000607020 DCAF11Q8TEB1 546 aa22.06■■□□□ 1.12
SSBP4-214ENST00000607020 PDE3BQ13370 1112 aa22.05■■□□□ 1.12
SSBP4-214ENST00000607020 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
SSBP4-214ENST00000607020 EVA1CP58658 441 aa22.04■■□□□ 1.12
SSBP4-214ENST00000607020 NBPF8Q3BBV2 869 aa22.04■■□□□ 1.12
SSBP4-214ENST00000607020 NBPF14Q5TI25 921 aa22.04■■□□□ 1.12
SSBP4-214ENST00000607020 ATP7BP35670 1465 aa22.03■■□□□ 1.12
SSBP4-214ENST00000607020 POLR3AO14802 1390 aaPredicted RBP22.03■■□□□ 1.12
SSBP4-214ENST00000607020 PLEKHG3A1L390 1219 aa22.03■■□□□ 1.12
SSBP4-214ENST00000607020 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
SSBP4-214ENST00000607020 THRAP3Q9Y2W1 955 aaKnown RBP22.02■■□□□ 1.12
SSBP4-214ENST00000607020 SSH2Q76I76 1423 aa22.02■■□□□ 1.12
SSBP4-214ENST00000607020 TNS1Q9HBL0 1735 aaKnown RBP22.02■■□□□ 1.12
SSBP4-214ENST00000607020 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
SSBP4-214ENST00000607020 C11orf95C9JLR9 678 aaPredicted RBP22.01■■□□□ 1.11
SSBP4-214ENST00000607020 CDK19Q9BWU1 502 aa22.01■■□□□ 1.11
SSBP4-214ENST00000607020 USP35Q9P2H5 1018 aa22.01■■□□□ 1.11
SSBP4-214ENST00000607020 CCDC61Q9Y6R9 512 aa22.01■■□□□ 1.11
SSBP4-214ENST00000607020 CPDO75976 1380 aa22■■□□□ 1.11
SSBP4-214ENST00000607020 LARP1Q6PKG0 1096 aaKnown RBP22■■□□□ 1.11
SSBP4-214ENST00000607020 ACEP12821 1306 aa22■■□□□ 1.11
SSBP4-214ENST00000607020 NUTM2GQ5VZR2 741 aa21.99■■□□□ 1.11
SSBP4-214ENST00000607020 YY1P25490 414 aa21.98■■□□□ 1.11
SSBP4-214ENST00000607020 USP19O94966 1318 aa21.98■■□□□ 1.11
SSBP4-214ENST00000607020 SPON1Q9HCB6 807 aa21.97■■□□□ 1.11
SSBP4-214ENST00000607020 RAB3GAP2Q9H2M9 1393 aa21.97■■□□□ 1.11
SSBP4-214ENST00000607020 ABTB2Q8N961 1025 aa21.96■■□□□ 1.11
SSBP4-214ENST00000607020 KCNQ2O43526 872 aa21.95■■□□□ 1.1
SSBP4-214ENST00000607020 CAMTA1Q9Y6Y1 1673 aa21.95■■□□□ 1.1
SSBP4-214ENST00000607020 GCP02774 474 aa21.94■■□□□ 1.1
SSBP4-214ENST00000607020 NLRP13Q86W25 1043 aa21.93■■□□□ 1.1
SSBP4-214ENST00000607020 PLSCR1O15162 318 aa21.92■■□□□ 1.1
SSBP4-214ENST00000607020 NINLQ9Y2I6 1382 aa21.91■■□□□ 1.1
SSBP4-214ENST00000607020 BRD4O60885 1362 aaPredicted RBP21.9■■□□□ 1.1
SSBP4-214ENST00000607020 PPP1R1BQ9UD71 204 aaPredicted RBP21.9■■□□□ 1.1
SSBP4-214ENST00000607020 PHRF1Q9P1Y6 1649 aaKnown RBP21.89■■□□□ 1.09
SSBP4-214ENST00000607020 DCAF8L1A6NGE4 600 aa21.89■■□□□ 1.09
SSBP4-214ENST00000607020 RREB1Q92766 1687 aa21.88■■□□□ 1.09
SSBP4-214ENST00000607020 CRB1P82279 1406 aa21.86■■□□□ 1.09
SSBP4-214ENST00000607020 NRKQ7Z2Y5 1582 aa21.86■■□□□ 1.09
SSBP4-214ENST00000607020 ITSN1Q15811 1721 aa21.86■■□□□ 1.09
SSBP4-214ENST00000607020 LMO7Q8WWI1 1683 aa21.85■■□□□ 1.09
SSBP4-214ENST00000607020 COL5A2P05997 1499 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-214ENST00000607020 BCL11BQ9C0K0 894 aaPredicted RBP21.85■■□□□ 1.09
SSBP4-214ENST00000607020 OVOS2A0A0G2JMS6 1433 aa21.85■■□□□ 1.09
SSBP4-214ENST00000607020 OVOS2A0A0J9YW53 1432 aa21.85■■□□□ 1.09
SSBP4-214ENST00000607020 OVOS2Q6IE36 1432 aa21.85■■□□□ 1.09
SSBP4-214ENST00000607020 AATKQ6ZMQ8 1374 aa21.85■■□□□ 1.09
SSBP4-214ENST00000607020 NUP188Q5SRE5 1749 aa21.83■■□□□ 1.09
SSBP4-214ENST00000607020 ARHGEF28Q8N1W1 1705 aaKnown RBP21.83■■□□□ 1.08
SSBP4-214ENST00000607020 DDB1Q16531 1140 aa21.82■■□□□ 1.08
SSBP4-214ENST00000607020 BCL9O00512 1426 aa21.81■■□□□ 1.08
SSBP4-214ENST00000607020 PROM2Q8N271 834 aa21.81■■□□□ 1.08
SSBP4-214ENST00000607020 ANO8Q9HCE9 1232 aaPredicted RBP21.81■■□□□ 1.08
SSBP4-214ENST00000607020 TOPAZ1Q8N9V7 1692 aa21.8■■□□□ 1.08
SSBP4-214ENST00000607020 SRPK2P78362 688 aaKnown RBP21.8■■□□□ 1.08
SSBP4-214ENST00000607020 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
SSBP4-214ENST00000607020 CDCA7Q9BWT1 371 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-214ENST00000607020 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
SSBP4-214ENST00000607020 NLRP6P59044 892 aa21.79■■□□□ 1.08
SSBP4-214ENST00000607020 CABP2Q9NPB3 220 aa21.78■■□□□ 1.08
SSBP4-214ENST00000607020 PARP4Q9UKK3 1724 aaKnown RBP21.77■■□□□ 1.08
SSBP4-214ENST00000607020 TOM1L2Q6ZVM7 507 aa21.77■■□□□ 1.08
SSBP4-214ENST00000607020 PTF1AQ7RTS3 328 aa21.77■■□□□ 1.08
SSBP4-214ENST00000607020 CABP1Q9NZU7 370 aa21.77■■□□□ 1.08
SSBP4-214ENST00000607020 CENPJQ9HC77 1338 aaPredicted RBP21.77■■□□□ 1.07
SSBP4-214ENST00000607020 MARCH10Q8NA82 808 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-214ENST00000607020 AXIN2Q9Y2T1 843 aa21.76■■□□□ 1.07
SSBP4-214ENST00000607020 WDR17Q8IZU2 1322 aa21.76■■□□□ 1.07
SSBP4-214ENST00000607020 USP6P35125 1406 aa21.75■■□□□ 1.07
SSBP4-214ENST00000607020 PTGER2P43116 358 aa21.75■■□□□ 1.07
SSBP4-214ENST00000607020 PEAK1Q9H792 1746 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms