RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 ARHGEF11O15085 1522 aa8.39□□□□□ -1.07
SRGAP2-211ENST00000604423 ANKRD30BQ9BXX2 1392 aa8.38□□□□□ -1.07
SRGAP2-211ENST00000604423 FCHSD2O94868 740 aa8.38□□□□□ -1.07
SRGAP2-211ENST00000604423 WBP1LQ9NX94 342 aa8.38□□□□□ -1.07
SRGAP2-211ENST00000604423 L1TD1Q5T7N2 865 aaKnown RBP8.37□□□□□ -1.07
SRGAP2-211ENST00000604423 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
SRGAP2-211ENST00000604423 HPS5Q9UPZ3 1129 aa8.37□□□□□ -1.07
SRGAP2-211ENST00000604423 FRAT2O75474 233 aaPredicted RBP8.37□□□□□ -1.07
SRGAP2-211ENST00000604423 PLA2G2EQ9NZK7 142 aa8.37□□□□□ -1.07
SRGAP2-211ENST00000604423 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
SRGAP2-211ENST00000604423 RALBP1Q15311 655 aa8.36□□□□□ -1.07
SRGAP2-211ENST00000604423 ZNF326Q5BKZ1 582 aaKnown RBP8.36□□□□□ -1.07
SRGAP2-211ENST00000604423 FECHP22830 423 aa8.36□□□□□ -1.07
SRGAP2-211ENST00000604423 CRBNQ96SW2 442 aa8.36□□□□□ -1.07
SRGAP2-211ENST00000604423 E9PCH4 1651 aa8.35□□□□□ -1.07
SRGAP2-211ENST00000604423 CENPQQ7L2Z9 268 aaPredicted RBP8.35□□□□□ -1.07
SRGAP2-211ENST00000604423 GPIHBP1Q8IV16 184 aa8.35□□□□□ -1.07
SRGAP2-211ENST00000604423 MBD5Q9P267 1494 aa8.35□□□□□ -1.07
SRGAP2-211ENST00000604423 PLEKHH2Q8IVE3 1493 aa8.34□□□□□ -1.07
SRGAP2-211ENST00000604423 NAP1L5Q96NT1 182 aaPredicted RBP8.34□□□□□ -1.07
SRGAP2-211ENST00000604423 NESP48681 1621 aa8.34□□□□□ -1.07
SRGAP2-211ENST00000604423 MAGI3Q5TCQ9 1506 aa8.34□□□□□ -1.07
SRGAP2-211ENST00000604423 DCAF11Q8TEB1 546 aa8.34□□□□□ -1.07
SRGAP2-211ENST00000604423 ABCA10Q8WWZ4 1543 aa8.33□□□□□ -1.08
SRGAP2-211ENST00000604423 ROCK1Q13464 1354 aa8.33□□□□□ -1.08
SRGAP2-211ENST00000604423 HIC1Q14526 733 aa8.33□□□□□ -1.08
SRGAP2-211ENST00000604423 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
SRGAP2-211ENST00000604423 DNMT1P26358 1616 aaKnown RBP8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 GPR37O15354 613 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 PLIN1O60240 522 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 HDGFP51858 240 aaKnown RBP8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 NLRP13Q86W25 1043 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 SKAP1Q86WV1 359 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 EYA1Q99502 592 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 ADGRG1Q9Y653 693 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 DNMBPQ6XZF7 1577 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 RALGAPBQ86X10 1494 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 DAPK1P53355 1430 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 TULP1O00294 542 aaPredicted RBP8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 HSP90AA1P07900 732 aaKnown RBP8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 PPP4CP60510 307 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 BECN1Q14457 450 aa8.32□□□□□ -1.08
SRGAP2-211ENST00000604423 GNPATO15228 680 aa8.31□□□□□ -1.08
SRGAP2-211ENST00000604423 HSP90AA2PQ14568 343 aaPredicted RBP8.31□□□□□ -1.08
SRGAP2-211ENST00000604423 PNNQ9H307 717 aaKnown RBP8.31□□□□□ -1.08
SRGAP2-211ENST00000604423 ADGBQ8N7X0 1667 aa8.31□□□□□ -1.08
SRGAP2-211ENST00000604423 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 RBM46Q8TBY0 533 aaKnown RBP8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 CADPSQ9ULU8 1353 aa8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 KDM2BQ8NHM5 1336 aa8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 CARD11Q9BXL7 1154 aa8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 RRAGDQ9NQL2 400 aaPredicted RBP8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 ZMYM4Q5VZL5 1548 aa8.3□□□□□ -1.08
SRGAP2-211ENST00000604423 RAD54L2Q9Y4B4 1467 aa8.29□□□□□ -1.08
SRGAP2-211ENST00000604423 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
SRGAP2-211ENST00000604423 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
SRGAP2-211ENST00000604423 KIAA1107Q9UPP5 1409 aa8.29□□□□□ -1.08
SRGAP2-211ENST00000604423 RGS3P49796 1198 aa8.29□□□□□ -1.08
SRGAP2-211ENST00000604423 ZMYND15Q9H091 742 aa8.29□□□□□ -1.08
SRGAP2-211ENST00000604423 POGKQ9P215 609 aa8.29□□□□□ -1.08
SRGAP2-211ENST00000604423 EPRSP07814 1512 aaKnown RBP8.28□□□□□ -1.08
SRGAP2-211ENST00000604423 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
SRGAP2-211ENST00000604423 POLA1P09884 1462 aaPredicted RBP8.28□□□□□ -1.08
SRGAP2-211ENST00000604423 PZPP20742 1482 aa8.28□□□□□ -1.08
SRGAP2-211ENST00000604423 DNAJB2P25686 324 aa8.27□□□□□ -1.09
SRGAP2-211ENST00000604423 ARXQ96QS3 562 aa8.27□□□□□ -1.09
SRGAP2-211ENST00000604423 INSRP06213 1382 aa8.27□□□□□ -1.09
SRGAP2-211ENST00000604423 PARD3Q8TEW0 1356 aa8.27□□□□□ -1.09
SRGAP2-211ENST00000604423 FANCD2Q9BXW9 1451 aa8.27□□□□□ -1.09
SRGAP2-211ENST00000604423 ARHGEF12Q9NZN5 1544 aa8.27□□□□□ -1.09
SRGAP2-211ENST00000604423 GOLGA6L3A6NEY3 463 aa8.27□□□□□ -1.09
SRGAP2-211ENST00000604423 CDK13Q14004 1512 aaKnown RBP8.26□□□□□ -1.09
SRGAP2-211ENST00000604423 UHRF1BP1Q6BDS2 1440 aa8.26□□□□□ -1.09
SRGAP2-211ENST00000604423 CLCN1P35523 988 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 METTL3Q86U44 580 aaKnown RBP8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 PXYLP1Q8TE99 480 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 TOPBP1Q92547 1522 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 ABCC5O15440 1437 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 EIF3AQ14152 1382 aaKnown RBP8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 C20orf194Q5TEA3 1177 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 NYAP1Q6ZVC0 841 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 SLF2Q8IX21 1173 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 TMEM134Q9H6X4 195 aa8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 UPF2Q9HAU5 1272 aaKnown RBP8.25□□□□□ -1.09
SRGAP2-211ENST00000604423 ST20-MTHFSA0A0A6YYL1 179 aa8.24□□□□□ -1.09
SRGAP2-211ENST00000604423 APLP1P51693 650 aa8.24□□□□□ -1.09
SRGAP2-211ENST00000604423 LAMC3Q9Y6N6 1575 aa8.24□□□□□ -1.09
SRGAP2-211ENST00000604423 ITSN2Q9NZM3 1697 aa8.24□□□□□ -1.09
SRGAP2-211ENST00000604423 OATP04181 439 aa8.24□□□□□ -1.09
SRGAP2-211ENST00000604423 CROCC2H7BZ55 1655 aa8.23□□□□□ -1.09
SRGAP2-211ENST00000604423 WDR62O43379 1518 aa8.23□□□□□ -1.09
SRGAP2-211ENST00000604423 MAPK8IP3Q9UPT6 1336 aa8.23□□□□□ -1.09
SRGAP2-211ENST00000604423 PHOX2BQ99453 314 aa8.22□□□□□ -1.09
SRGAP2-211ENST00000604423 GAPVD1Q14C86 1478 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms