RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 TMEM132AQ24JP5 1023 aa14.13□□□□□ -0.15
SCN8A-208ENST00000599343 CLASRPQ8N2M8 674 aaKnown RBP14.13□□□□□ -0.15
SCN8A-208ENST00000599343 STK38Q15208 465 aa14.13□□□□□ -0.15
SCN8A-208ENST00000599343 ZNF428Q96B54 188 aa14.13□□□□□ -0.15
SCN8A-208ENST00000599343 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
SCN8A-208ENST00000599343 TBC1D2BQ9UPU7 963 aa14.12□□□□□ -0.15
SCN8A-208ENST00000599343 CCP110O43303 1012 aa14.11□□□□□ -0.15
SCN8A-208ENST00000599343 SERPINC1P01008 464 aa14.11□□□□□ -0.15
SCN8A-208ENST00000599343 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
SCN8A-208ENST00000599343 ZNF396Q96N95 335 aaPredicted RBP14.11□□□□□ -0.15
SCN8A-208ENST00000599343 CNTLNQ9NXG0 1405 aa14.11□□□□□ -0.15
SCN8A-208ENST00000599343 KRT18P05783 430 aaKnown RBP14.11□□□□□ -0.15
SCN8A-208ENST00000599343 CT47B1P0C2W7 299 aaPredicted RBP14.11□□□□□ -0.15
SCN8A-208ENST00000599343 MAP4K4O95819 1239 aaPredicted RBP14.11□□□□□ -0.15
SCN8A-208ENST00000599343 NEFHP12036 1026 aa14.1□□□□□ -0.15
SCN8A-208ENST00000599343 FAM177A1Q8N128 213 aaPredicted RBP14.1□□□□□ -0.15
SCN8A-208ENST00000599343 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
SCN8A-208ENST00000599343 AAMPQ13685 434 aa14.1□□□□□ -0.15
SCN8A-208ENST00000599343 SYCP1Q15431 976 aa14.1□□□□□ -0.15
SCN8A-208ENST00000599343 TXLNAP40222 546 aa14.09□□□□□ -0.15
SCN8A-208ENST00000599343 EXOSC9Q06265 439 aaKnown RBP14.09□□□□□ -0.15
SCN8A-208ENST00000599343 RABEP1Q15276 862 aa14.09□□□□□ -0.15
SCN8A-208ENST00000599343 CCAR1Q8IX12 1150 aaKnown RBP14.09□□□□□ -0.15
SCN8A-208ENST00000599343 MTHFSP49914 203 aa14.09□□□□□ -0.15
SCN8A-208ENST00000599343 CCDC30Q5VVM6 783 aa14.09□□□□□ -0.15
SCN8A-208ENST00000599343 GNAI3P08754 354 aa14.09□□□□□ -0.15
SCN8A-208ENST00000599343 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
SCN8A-208ENST00000599343 PDCP20941 246 aa14.08□□□□□ -0.16
SCN8A-208ENST00000599343 TTC39AQ5SRH9 613 aa14.08□□□□□ -0.16
SCN8A-208ENST00000599343 NOB1Q9ULX3 412 aaKnown RBP14.08□□□□□ -0.16
SCN8A-208ENST00000599343 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.16
SCN8A-208ENST00000599343 TNMDQ9H2S6 317 aa14.08□□□□□ -0.16
SCN8A-208ENST00000599343 ANKRD62A6NC57 917 aa14.08□□□□□ -0.16
SCN8A-208ENST00000599343 PAF1Q8N7H5 531 aa14.08□□□□□ -0.16
SCN8A-208ENST00000599343 HMGN5P82970 282 aaKnown RBP14.07□□□□□ -0.16
SCN8A-208ENST00000599343 MCM2P49736 904 aa14.07□□□□□ -0.16
SCN8A-208ENST00000599343 ZNHIT6Q9NWK9 470 aaKnown RBP14.07□□□□□ -0.16
SCN8A-208ENST00000599343 CCDC192P0DO97 292 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 FAM193AP78312 1265 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 PPFIBP1Q86W92 1011 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 CENPHQ9H3R5 247 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 DEF6Q9H4E7 631 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 ZHX3Q9H4I2 956 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 CCDC181Q5TID7 509 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 GOLGA6L10A6NI86 522 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 HIP1O00291 1037 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 ME1P48163 572 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 TANGO6Q9C0B7 1094 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 MIA2Q96PC5 1412 aa14.06□□□□□ -0.16
SCN8A-208ENST00000599343 TSR2Q969E8 191 aaKnown RBP14.06□□□□□ -0.16
SCN8A-208ENST00000599343 UQCRHLA0A096LP55 91 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 UQCRHP07919 91 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 SIL1Q9H173 461 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 ERLIN2O94905 339 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 NLRP6P59044 892 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 ATP2B2Q01814 1243 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 TWISTNBQ3B726 338 aaPredicted RBP14.05□□□□□ -0.16
SCN8A-208ENST00000599343 CCDC112Q8NEF3 446 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 CYP46A1Q9Y6A2 500 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 BCAR3O75815 825 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 ENOX2Q16206 610 aaKnown RBP14.05□□□□□ -0.16
SCN8A-208ENST00000599343 GNAI2P04899 355 aa14.05□□□□□ -0.16
SCN8A-208ENST00000599343 SLC3A2P08195 630 aaKnown RBP14.04□□□□□ -0.16
SCN8A-208ENST00000599343 GRPEL1Q9HAV7 217 aa14.04□□□□□ -0.16
SCN8A-208ENST00000599343 KIAA0754O94854 1291 aa14.04□□□□□ -0.16
SCN8A-208ENST00000599343 KIF6Q6ZMV9 814 aa14.04□□□□□ -0.16
SCN8A-208ENST00000599343 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
SCN8A-208ENST00000599343 CNNM1Q9NRU3 951 aa14.04□□□□□ -0.16
SCN8A-208ENST00000599343 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
SCN8A-208ENST00000599343 PIP4K2AP48426 406 aaPredicted RBP14.04□□□□□ -0.16
SCN8A-208ENST00000599343 PKNOX2Q96KN3 472 aa14.04□□□□□ -0.16
SCN8A-208ENST00000599343 SEPT7Q16181 437 aaKnown RBP14.04□□□□□ -0.16
SCN8A-208ENST00000599343 PDCL3Q9H2J4 239 aa14.04□□□□□ -0.16
SCN8A-208ENST00000599343 GCC1Q96CN9 775 aa14.03□□□□□ -0.16
SCN8A-208ENST00000599343 TAX1BP1Q86VP1 789 aa14.03□□□□□ -0.16
SCN8A-208ENST00000599343 K7ELQ4 463 aaPredicted RBP14.03□□□□□ -0.16
SCN8A-208ENST00000599343 PPP2R1AP30153 589 aa14.03□□□□□ -0.16
SCN8A-208ENST00000599343 CCDC158Q5M9N0 1113 aa14.03□□□□□ -0.16
SCN8A-208ENST00000599343 ATF3P18847 181 aa14.02□□□□□ -0.16
SCN8A-208ENST00000599343 ERC1Q8IUD2 1116 aa14.02□□□□□ -0.16
SCN8A-208ENST00000599343 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.16
SCN8A-208ENST00000599343 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
SCN8A-208ENST00000599343 WASHC2AQ641Q2 1341 aa14.02□□□□□ -0.17
SCN8A-208ENST00000599343 JMYQ8N9B5 988 aa14.02□□□□□ -0.17
SCN8A-208ENST00000599343 NUP133Q8WUM0 1156 aa14.02□□□□□ -0.17
SCN8A-208ENST00000599343 WIZO95785 1651 aa14.02□□□□□ -0.17
SCN8A-208ENST00000599343 SLC4A2P04920 1241 aa14.02□□□□□ -0.17
SCN8A-208ENST00000599343 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 ZRSR2Q15696 482 aaKnown RBP14.01□□□□□ -0.17
SCN8A-208ENST00000599343 WWC2Q6AWC2 1192 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 ZNF644Q9H582 1327 aaPredicted RBP14.01□□□□□ -0.17
SCN8A-208ENST00000599343 PTPRGP23470 1445 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 WDR33Q9C0J8 1336 aaKnown RBP14.01□□□□□ -0.17
SCN8A-208ENST00000599343 CCDC69A6NI79 296 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
SCN8A-208ENST00000599343 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 DACH1Q9UI36 760 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 ERICH4A6NGS2 130 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 SEPT11Q9NVA2 429 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms