RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 PRDM11Q9NQV5 511 aa15.5■□□□□ 0.07
NOTCH3-203ENST00000595514 ADGRF5Q8IZF2 1346 aa15.49■□□□□ 0.07
NOTCH3-203ENST00000595514 TMEM132EQ6IEE7 984 aa15.49■□□□□ 0.07
NOTCH3-203ENST00000595514 PMFBP1Q8TBY8 1022 aa15.49■□□□□ 0.07
NOTCH3-203ENST00000595514 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
NOTCH3-203ENST00000595514 PPLO60437 1756 aa15.47■□□□□ 0.07
NOTCH3-203ENST00000595514 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
NOTCH3-203ENST00000595514 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
NOTCH3-203ENST00000595514 NRKQ7Z2Y5 1582 aa15.45■□□□□ 0.06
NOTCH3-203ENST00000595514 SIRT1Q96EB6 747 aa15.45■□□□□ 0.06
NOTCH3-203ENST00000595514 GPRASP1Q5JY77 1395 aa15.45■□□□□ 0.06
NOTCH3-203ENST00000595514 YTHDC2Q9H6S0 1430 aaKnown RBP15.44■□□□□ 0.06
NOTCH3-203ENST00000595514 KNDC1Q76NI1 1749 aa15.44■□□□□ 0.06
NOTCH3-203ENST00000595514 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
NOTCH3-203ENST00000595514 ZBTB7AO95365 584 aa15.43■□□□□ 0.06
NOTCH3-203ENST00000595514 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
NOTCH3-203ENST00000595514 IFT172Q9UG01 1749 aa15.43■□□□□ 0.06
NOTCH3-203ENST00000595514 RGPD8O14715 1765 aaPredicted RBP15.42■□□□□ 0.06
NOTCH3-203ENST00000595514 SYT17Q9BSW7 474 aa15.42■□□□□ 0.06
NOTCH3-203ENST00000595514 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
NOTCH3-203ENST00000595514 KIAA0232Q92628 1395 aa15.41■□□□□ 0.06
NOTCH3-203ENST00000595514 EVA1CP58658 441 aa15.41■□□□□ 0.06
NOTCH3-203ENST00000595514 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
NOTCH3-203ENST00000595514 CHRNA2Q15822 529 aa15.41■□□□□ 0.06
NOTCH3-203ENST00000595514 FHDC1Q9C0D6 1143 aaPredicted RBP15.41■□□□□ 0.06
NOTCH3-203ENST00000595514 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
NOTCH3-203ENST00000595514 ANKRD30BQ9BXX2 1392 aa15.4■□□□□ 0.06
NOTCH3-203ENST00000595514 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
NOTCH3-203ENST00000595514 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
NOTCH3-203ENST00000595514 PTGER2P43116 358 aa15.4■□□□□ 0.06
NOTCH3-203ENST00000595514 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
NOTCH3-203ENST00000595514 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
NOTCH3-203ENST00000595514 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
NOTCH3-203ENST00000595514 BCL11BQ9C0K0 894 aaPredicted RBP15.39■□□□□ 0.05
NOTCH3-203ENST00000595514 PDGFDQ9GZP0 370 aaPredicted RBP15.39■□□□□ 0.05
NOTCH3-203ENST00000595514 TRPM3Q9HCF6 1732 aaPredicted RBP15.38■□□□□ 0.05
NOTCH3-203ENST00000595514 TCP11L2Q8N4U5 519 aa15.38■□□□□ 0.05
NOTCH3-203ENST00000595514 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
NOTCH3-203ENST00000595514 MYOM1P52179 1685 aa15.38■□□□□ 0.05
NOTCH3-203ENST00000595514 ALS2Q96Q42 1657 aa15.38■□□□□ 0.05
NOTCH3-203ENST00000595514 PLSCR1O15162 318 aa15.37■□□□□ 0.05
NOTCH3-203ENST00000595514 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
NOTCH3-203ENST00000595514 PIK3C2GO75747 1445 aa15.36■□□□□ 0.05
NOTCH3-203ENST00000595514 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
NOTCH3-203ENST00000595514 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
NOTCH3-203ENST00000595514 NGDNQ8NEJ9 315 aaKnown RBP15.36■□□□□ 0.05
NOTCH3-203ENST00000595514 POGKQ9P215 609 aa15.36■□□□□ 0.05
NOTCH3-203ENST00000595514 CASZ1Q86V15 1759 aa15.36■□□□□ 0.05
NOTCH3-203ENST00000595514 CHD4Q14839 1912 aa15.35■□□□□ 0.05
NOTCH3-203ENST00000595514 DHX57Q6P158 1386 aaKnown RBP15.35■□□□□ 0.05
NOTCH3-203ENST00000595514 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
NOTCH3-203ENST00000595514 PPARGC1BQ86YN6 1023 aaKnown RBP15.34■□□□□ 0.05
NOTCH3-203ENST00000595514 THRAP3Q9Y2W1 955 aaKnown RBP15.34■□□□□ 0.05
NOTCH3-203ENST00000595514 EIF3AQ14152 1382 aaKnown RBP15.34■□□□□ 0.05
NOTCH3-203ENST00000595514 DLC1Q96QB1 1528 aa15.33■□□□□ 0.05
NOTCH3-203ENST00000595514 GPR162Q16538 588 aa15.33■□□□□ 0.04
NOTCH3-203ENST00000595514 MTFR1LQ9H019 292 aa15.33■□□□□ 0.04
NOTCH3-203ENST00000595514 STK32BQ9NY57 414 aa15.33■□□□□ 0.04
NOTCH3-203ENST00000595514 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.04
NOTCH3-203ENST00000595514 OVOS2A0A0J9YW53 1432 aa15.33■□□□□ 0.04
NOTCH3-203ENST00000595514 OVOS2Q6IE36 1432 aa15.33■□□□□ 0.04
NOTCH3-203ENST00000595514 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
NOTCH3-203ENST00000595514 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
NOTCH3-203ENST00000595514 SPATA31E1Q6ZUB1 1445 aa15.31■□□□□ 0.04
NOTCH3-203ENST00000595514 RGPD3A6NKT7 1758 aaPredicted RBP15.3■□□□□ 0.04
NOTCH3-203ENST00000595514 RGPD4Q7Z3J3 1758 aa15.3■□□□□ 0.04
NOTCH3-203ENST00000595514 ARXQ96QS3 562 aa15.3■□□□□ 0.04
NOTCH3-203ENST00000595514 HIRIP3Q9BW71 556 aaPredicted RBP15.3■□□□□ 0.04
NOTCH3-203ENST00000595514 PRR36Q9H6K5 1346 aa15.3■□□□□ 0.04
NOTCH3-203ENST00000595514 CFAP70Q5T0N1 1121 aa15.29■□□□□ 0.04
NOTCH3-203ENST00000595514 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
NOTCH3-203ENST00000595514 SGIP1Q9BQI5 828 aa15.29■□□□□ 0.04
NOTCH3-203ENST00000595514 GOLGB1Q14789 3259 aaKnown RBP15.28■□□□□ 0.04
NOTCH3-203ENST00000595514 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
NOTCH3-203ENST00000595514 PROM2Q8N271 834 aa15.28■□□□□ 0.04
NOTCH3-203ENST00000595514 MAP3K5Q99683 1374 aa15.27■□□□□ 0.04
NOTCH3-203ENST00000595514 TULP4Q9NRJ4 1543 aa15.27■□□□□ 0.03
NOTCH3-203ENST00000595514 MINK1Q8N4C8 1332 aaPredicted RBP15.26■□□□□ 0.03
NOTCH3-203ENST00000595514 DDB1Q16531 1140 aa15.26■□□□□ 0.03
NOTCH3-203ENST00000595514 TXNRD1Q16881 649 aa15.26■□□□□ 0.03
NOTCH3-203ENST00000595514 PTF1AQ7RTS3 328 aa15.26■□□□□ 0.03
NOTCH3-203ENST00000595514 ATP7BP35670 1465 aa15.26■□□□□ 0.03
NOTCH3-203ENST00000595514 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
NOTCH3-203ENST00000595514 WASLO00401 505 aaPredicted RBP15.25■□□□□ 0.03
NOTCH3-203ENST00000595514 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
NOTCH3-203ENST00000595514 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
NOTCH3-203ENST00000595514 CPDO75976 1380 aa15.24■□□□□ 0.03
NOTCH3-203ENST00000595514 PEAK1Q9H792 1746 aa15.23■□□□□ 0.03
NOTCH3-203ENST00000595514 KLHL34Q8N239 644 aa15.22■□□□□ 0.03
NOTCH3-203ENST00000595514 CRB1P82279 1406 aa15.22■□□□□ 0.03
NOTCH3-203ENST00000595514 HSPA6P17066 643 aa15.21■□□□□ 0.03
NOTCH3-203ENST00000595514 TRAK1Q9UPV9 953 aa15.21■□□□□ 0.03
NOTCH3-203ENST00000595514 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
NOTCH3-203ENST00000595514 SHANK3Q9BYB0 1731 aa15.2■□□□□ 0.02
NOTCH3-203ENST00000595514 LMO7Q8WWI1 1683 aa15.19■□□□□ 0.02
NOTCH3-203ENST00000595514 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
NOTCH3-203ENST00000595514 SBF2Q86WG5 1849 aa15.18■□□□□ 0.02
NOTCH3-203ENST00000595514 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
NOTCH3-203ENST00000595514 NUDT16Q96DE0 195 aaKnown RBP15.18■□□□□ 0.02
NOTCH3-203ENST00000595514 BCL9O00512 1426 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms