RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 SLIT2O94813 1529 aa8.44□□□□□ -1.06
SSX4B-201ENST00000595235 NRAPQ86VF7 1730 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 NBPF8Q3BBV2 869 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
SSX4B-201ENST00000595235 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 QTRT2Q9H974 415 aaKnown RBP8.43□□□□□ -1.06
SSX4B-201ENST00000595235 USP21Q9UK80 565 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 CENPJQ9HC77 1338 aaPredicted RBP8.43□□□□□ -1.06
SSX4B-201ENST00000595235 ARHGEF10O15013 1369 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 ROCK2O75116 1388 aaKnown RBP8.43□□□□□ -1.06
SSX4B-201ENST00000595235 GPRASP1Q5JY77 1395 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 GLI3P10071 1580 aa8.43□□□□□ -1.06
SSX4B-201ENST00000595235 RBM6P78332 1123 aaKnown RBP8.42□□□□□ -1.06
SSX4B-201ENST00000595235 LMOD2Q6P5Q4 547 aa8.42□□□□□ -1.06
SSX4B-201ENST00000595235 POLR3AO14802 1390 aaPredicted RBP8.42□□□□□ -1.06
SSX4B-201ENST00000595235 COL14A1Q05707 1796 aaKnown RBP8.41□□□□□ -1.06
SSX4B-201ENST00000595235 RALGAPBQ86X10 1494 aa8.41□□□□□ -1.06
SSX4B-201ENST00000595235 PPIP5K1Q6PFW1 1433 aa8.41□□□□□ -1.06
SSX4B-201ENST00000595235 NGDNQ8NEJ9 315 aaKnown RBP8.41□□□□□ -1.06
SSX4B-201ENST00000595235 TRPC5Q9UL62 973 aaPredicted RBP8.41□□□□□ -1.06
SSX4B-201ENST00000595235 NRKQ7Z2Y5 1582 aa8.4□□□□□ -1.06
SSX4B-201ENST00000595235 TONSLQ96HA7 1378 aa8.4□□□□□ -1.06
SSX4B-201ENST00000595235 CAPN15O75808 1086 aa8.4□□□□□ -1.06
SSX4B-201ENST00000595235 CABP2Q9NPB3 220 aa8.4□□□□□ -1.06
SSX4B-201ENST00000595235 AKAP12Q02952 1782 aa8.4□□□□□ -1.07
SSX4B-201ENST00000595235 ACEP12821 1306 aa8.39□□□□□ -1.07
SSX4B-201ENST00000595235 BRWD3Q6RI45 1802 aa8.39□□□□□ -1.07
SSX4B-201ENST00000595235 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
SSX4B-201ENST00000595235 PAK3O75914 559 aaPredicted RBP8.39□□□□□ -1.07
SSX4B-201ENST00000595235 HAP1P54257 671 aaPredicted RBP8.39□□□□□ -1.07
SSX4B-201ENST00000595235 SRPK2P78362 688 aaKnown RBP8.39□□□□□ -1.07
SSX4B-201ENST00000595235 CCDC61Q9Y6R9 512 aa8.39□□□□□ -1.07
SSX4B-201ENST00000595235 PIK3C2AO00443 1686 aa8.38□□□□□ -1.07
SSX4B-201ENST00000595235 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
SSX4B-201ENST00000595235 UNC5CLQ8IV45 518 aa8.38□□□□□ -1.07
SSX4B-201ENST00000595235 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.07
SSX4B-201ENST00000595235 NUTM2GQ5VZR2 741 aa8.37□□□□□ -1.07
SSX4B-201ENST00000595235 GJD4Q96KN9 370 aaPredicted RBP8.37□□□□□ -1.07
SSX4B-201ENST00000595235 MON2Q7Z3U7 1717 aa8.37□□□□□ -1.07
SSX4B-201ENST00000595235 USP6P35125 1406 aa8.37□□□□□ -1.07
SSX4B-201ENST00000595235 LMO7Q8WWI1 1683 aa8.37□□□□□ -1.07
SSX4B-201ENST00000595235 EVC2Q86UK5 1308 aa8.36□□□□□ -1.07
SSX4B-201ENST00000595235 MYCNP04198 464 aaPredicted RBP8.36□□□□□ -1.07
SSX4B-201ENST00000595235 SAMD1Q6SPF0 538 aaPredicted RBP8.36□□□□□ -1.07
SSX4B-201ENST00000595235 CARD11Q9BXL7 1154 aa8.36□□□□□ -1.07
SSX4B-201ENST00000595235 FOXD4L1Q9NU39 408 aa8.36□□□□□ -1.07
SSX4B-201ENST00000595235 SSH2Q76I76 1423 aa8.36□□□□□ -1.07
SSX4B-201ENST00000595235 SBNO2Q9Y2G9 1366 aa8.35□□□□□ -1.07
SSX4B-201ENST00000595235 SLIT3O75094 1523 aa8.35□□□□□ -1.07
SSX4B-201ENST00000595235 VPS72Q15906 364 aa8.35□□□□□ -1.07
SSX4B-201ENST00000595235 CABP1Q9NZU7 370 aa8.35□□□□□ -1.07
SSX4B-201ENST00000595235 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
SSX4B-201ENST00000595235 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
SSX4B-201ENST00000595235 USP19O94966 1318 aa8.34□□□□□ -1.07
SSX4B-201ENST00000595235 THSD7AQ9UPZ6 1657 aa8.34□□□□□ -1.07
SSX4B-201ENST00000595235 SPINK5Q9NQ38 1064 aaPredicted RBP8.34□□□□□ -1.07
SSX4B-201ENST00000595235 BTG4Q9NY30 223 aa8.34□□□□□ -1.07
SSX4B-201ENST00000595235 CD163L1Q9NR16 1453 aa8.33□□□□□ -1.08
SSX4B-201ENST00000595235 ZC3H6P61129 1189 aaKnown RBP8.33□□□□□ -1.08
SSX4B-201ENST00000595235 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
SSX4B-201ENST00000595235 CHRNA2Q15822 529 aa8.33□□□□□ -1.08
SSX4B-201ENST00000595235 ABTB2Q8N961 1025 aa8.33□□□□□ -1.08
SSX4B-201ENST00000595235 PRDM11Q9NQV5 511 aa8.33□□□□□ -1.08
SSX4B-201ENST00000595235 CCDC9Q9Y3X0 531 aaKnown RBP8.33□□□□□ -1.08
SSX4B-201ENST00000595235 USP54Q70EL1 1684 aa8.33□□□□□ -1.08
SSX4B-201ENST00000595235 CAMTA1Q9Y6Y1 1673 aa8.33□□□□□ -1.08
SSX4B-201ENST00000595235 BRD4O60885 1362 aaPredicted RBP8.33□□□□□ -1.08
SSX4B-201ENST00000595235 COL18A1P39060 1754 aa8.33□□□□□ -1.08
SSX4B-201ENST00000595235 CPDO75976 1380 aa8.32□□□□□ -1.08
SSX4B-201ENST00000595235 RGPD5Q99666 1765 aa8.31□□□□□ -1.08
SSX4B-201ENST00000595235 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
SSX4B-201ENST00000595235 PCGF6Q9BYE7 350 aa8.31□□□□□ -1.08
SSX4B-201ENST00000595235 WNK3Q9BYP7 1800 aa8.31□□□□□ -1.08
SSX4B-201ENST00000595235 SPATA31A5Q5VU36 1347 aa8.3□□□□□ -1.08
SSX4B-201ENST00000595235 SPATA31A7Q8IWB4 1347 aa8.3□□□□□ -1.08
SSX4B-201ENST00000595235 NFAT5O94916 1531 aa8.3□□□□□ -1.08
SSX4B-201ENST00000595235 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
SSX4B-201ENST00000595235 GCP02774 474 aa8.3□□□□□ -1.08
SSX4B-201ENST00000595235 FAM98CQ17RN3 349 aaKnown RBP8.3□□□□□ -1.08
SSX4B-201ENST00000595235 NLRP13Q86W25 1043 aa8.3□□□□□ -1.08
SSX4B-201ENST00000595235 TESK2Q96S53 571 aa8.3□□□□□ -1.08
SSX4B-201ENST00000595235 STRN4Q9NRL3 753 aa8.3□□□□□ -1.08
SSX4B-201ENST00000595235 KTN1Q86UP2 1357 aaKnown RBP8.3□□□□□ -1.08
SSX4B-201ENST00000595235 COL5A2P05997 1499 aaPredicted RBP8.3□□□□□ -1.08
SSX4B-201ENST00000595235 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
SSX4B-201ENST00000595235 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
SSX4B-201ENST00000595235 NLRP6P59044 892 aa8.29□□□□□ -1.08
SSX4B-201ENST00000595235 ZNF219Q9P2Y4 722 aaPredicted RBP8.29□□□□□ -1.08
SSX4B-201ENST00000595235 USP47Q96K76 1375 aa8.29□□□□□ -1.08
SSX4B-201ENST00000595235 TNS1Q9HBL0 1735 aaKnown RBP8.29□□□□□ -1.08
SSX4B-201ENST00000595235 SPATA31A1Q5TZJ5 1347 aa8.29□□□□□ -1.08
SSX4B-201ENST00000595235 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
SSX4B-201ENST00000595235 LTN1O94822 1766 aa8.28□□□□□ -1.08
SSX4B-201ENST00000595235 MYOM1P52179 1685 aa8.28□□□□□ -1.08
SSX4B-201ENST00000595235 A0A1W2PP64 1363 aa8.28□□□□□ -1.08
SSX4B-201ENST00000595235 A0A0G2JS52 829 aa8.28□□□□□ -1.08
SSX4B-201ENST00000595235 MYT1Q01538 1121 aa8.28□□□□□ -1.08
SSX4B-201ENST00000595235 ZNF692Q9BU19 519 aaPredicted RBP8.28□□□□□ -1.08
SSX4B-201ENST00000595235 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms