RNA–Protein interactions for RNA: ENST00000592442.1

LAMA3-213, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-213ENST00000592442 PCDHB15Q9Y5E8 787 aa7.8□□□□□ -1.16
LAMA3-213ENST00000592442 ADAMTS12P58397 1594 aa7.8□□□□□ -1.16
LAMA3-213ENST00000592442 RUSC2Q8N2Y8 1516 aa7.79□□□□□ -1.16
LAMA3-213ENST00000592442 GJA5P36382 358 aa7.79□□□□□ -1.16
LAMA3-213ENST00000592442 GRIN2AQ12879 1464 aa7.79□□□□□ -1.16
LAMA3-213ENST00000592442 CUL7Q14999 1698 aa7.79□□□□□ -1.16
LAMA3-213ENST00000592442 GGCXP38435 758 aa7.78□□□□□ -1.16
LAMA3-213ENST00000592442 BRICD5Q6PL45 260 aa7.78□□□□□ -1.16
LAMA3-213ENST00000592442 PROCA1Q8NCQ7 364 aaPredicted RBP7.78□□□□□ -1.16
LAMA3-213ENST00000592442 CABLES1Q8TDN4 633 aa7.78□□□□□ -1.16
LAMA3-213ENST00000592442 USB1Q9BQ65 265 aaKnown RBP7.78□□□□□ -1.16
LAMA3-213ENST00000592442 SALL2Q9Y467 1007 aaPredicted RBP7.78□□□□□ -1.16
LAMA3-213ENST00000592442 RAPGEF2Q9Y4G8 1499 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 HRCP23327 699 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 QPCTQ16769 361 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 RETREG3Q86VR2 466 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 SLC6A16Q9GZN6 736 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 GOPCQ9HD26 462 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 CHD1O14646 1710 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 ARHGEF11O15085 1522 aa7.77□□□□□ -1.17
LAMA3-213ENST00000592442 ERCC6L2Q5T890 1561 aa7.76□□□□□ -1.17
LAMA3-213ENST00000592442 SPDYE5A6NIY4 337 aa7.76□□□□□ -1.17
LAMA3-213ENST00000592442 S1PR4O95977 384 aa7.76□□□□□ -1.17
LAMA3-213ENST00000592442 PRPF38BQ5VTL8 546 aaKnown RBP7.76□□□□□ -1.17
LAMA3-213ENST00000592442 THAP11Q96EK4 314 aa7.76□□□□□ -1.17
LAMA3-213ENST00000592442 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
LAMA3-213ENST00000592442 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
LAMA3-213ENST00000592442 PRDM9Q9NQV7 894 aa7.75□□□□□ -1.17
LAMA3-213ENST00000592442 UBTFP17480 764 aaKnown RBP7.74□□□□□ -1.17
LAMA3-213ENST00000592442 HELBQ8NG08 1087 aaPredicted RBP7.74□□□□□ -1.17
LAMA3-213ENST00000592442 NUP160Q12769 1436 aa7.73□□□□□ -1.17
LAMA3-213ENST00000592442 LILRB3O75022 631 aa7.73□□□□□ -1.17
LAMA3-213ENST00000592442 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
LAMA3-213ENST00000592442 MSS51Q4VC12 460 aa7.73□□□□□ -1.17
LAMA3-213ENST00000592442 PPP1R18Q6NYC8 613 aa7.73□□□□□ -1.17
LAMA3-213ENST00000592442 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.73□□□□□ -1.17
LAMA3-213ENST00000592442 RTL5Q5HYW3 569 aaPredicted RBP7.72□□□□□ -1.17
LAMA3-213ENST00000592442 FAM160A2Q8N612 972 aaPredicted RBP7.72□□□□□ -1.17
LAMA3-213ENST00000592442 PRXQ9BXM0 1461 aa7.72□□□□□ -1.17
LAMA3-213ENST00000592442 CFAP99D6REC4 459 aa7.71□□□□□ -1.18
LAMA3-213ENST00000592442 IFFO2Q5TF58 517 aa7.71□□□□□ -1.18
LAMA3-213ENST00000592442 CCDC24Q8N4L8 307 aa7.71□□□□□ -1.18
LAMA3-213ENST00000592442 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.71□□□□□ -1.18
LAMA3-213ENST00000592442 KIAA0586Q9BVV6 1533 aa7.71□□□□□ -1.18
LAMA3-213ENST00000592442 CEP170Q5SW79 1584 aa7.71□□□□□ -1.18
LAMA3-213ENST00000592442 CLASP1Q7Z460 1538 aa7.7□□□□□ -1.18
LAMA3-213ENST00000592442 PPEF1O14829 653 aaPredicted RBP7.7□□□□□ -1.18
LAMA3-213ENST00000592442 AP1G2O75843 785 aa7.7□□□□□ -1.18
LAMA3-213ENST00000592442 JUNDP17535 347 aa7.7□□□□□ -1.18
LAMA3-213ENST00000592442 RANGAP1P46060 587 aaPredicted RBP7.7□□□□□ -1.18
LAMA3-213ENST00000592442 CARMIL2Q6F5E8 1435 aa7.69□□□□□ -1.18
LAMA3-213ENST00000592442 A0A0G2JS52 829 aa7.69□□□□□ -1.18
LAMA3-213ENST00000592442 RNF223E7ERA6 249 aa7.69□□□□□ -1.18
LAMA3-213ENST00000592442 RFC5P40937 340 aa7.69□□□□□ -1.18
LAMA3-213ENST00000592442 FCF1Q9Y324 198 aaKnown RBP7.69□□□□□ -1.18
LAMA3-213ENST00000592442 TTBK1Q5TCY1 1321 aaPredicted RBP7.69□□□□□ -1.18
LAMA3-213ENST00000592442 PRG4Q92954 1404 aaPredicted RBP7.69□□□□□ -1.18
LAMA3-213ENST00000592442 GOLGA3Q08378 1498 aa7.68□□□□□ -1.18
LAMA3-213ENST00000592442 HECW2Q9P2P5 1572 aa7.67□□□□□ -1.18
LAMA3-213ENST00000592442 DXOO77932 396 aaKnown RBP7.67□□□□□ -1.18
LAMA3-213ENST00000592442 MMP16P51512 607 aa7.67□□□□□ -1.18
LAMA3-213ENST00000592442 PPP2R2DQ66LE6 453 aa7.67□□□□□ -1.18
LAMA3-213ENST00000592442 NUDT12Q9BQG2 462 aa7.67□□□□□ -1.18
LAMA3-213ENST00000592442 IQGAP2Q13576 1575 aa7.67□□□□□ -1.18
LAMA3-213ENST00000592442 KIF21BO75037 1637 aa7.67□□□□□ -1.18
LAMA3-213ENST00000592442 ZBTB24O43167 697 aaPredicted RBP7.66□□□□□ -1.18
LAMA3-213ENST00000592442 CTHP32929 405 aa7.66□□□□□ -1.18
LAMA3-213ENST00000592442 FBXO31Q5XUX0 539 aaPredicted RBP7.66□□□□□ -1.18
LAMA3-213ENST00000592442 DESI1Q6ICB0 168 aa7.66□□□□□ -1.18
LAMA3-213ENST00000592442 ANKLE1Q8NAG6 615 aa7.66□□□□□ -1.18
LAMA3-213ENST00000592442 CCNYL3P0C7X3 344 aa7.65□□□□□ -1.18
LAMA3-213ENST00000592442 CTDSPL2Q05D32 466 aa7.65□□□□□ -1.18
LAMA3-213ENST00000592442 PTPRNQ16849 979 aa7.65□□□□□ -1.18
LAMA3-213ENST00000592442 TMEM259Q4ZIN3 620 aa7.65□□□□□ -1.18
LAMA3-213ENST00000592442 PER1O15534 1290 aaPredicted RBP7.64□□□□□ -1.19
LAMA3-213ENST00000592442 PTPRGP23470 1445 aa7.63□□□□□ -1.19
LAMA3-213ENST00000592442 TNIKQ9UKE5 1360 aa7.63□□□□□ -1.19
LAMA3-213ENST00000592442 USP17L8P0C7I0 530 aa7.63□□□□□ -1.19
LAMA3-213ENST00000592442 LYPD8Q6UX82 237 aa7.63□□□□□ -1.19
LAMA3-213ENST00000592442 LRRN4Q8WUT4 740 aa7.62□□□□□ -1.19
LAMA3-213ENST00000592442 CTTNBP2Q8WZ74 1663 aa7.62□□□□□ -1.19
LAMA3-213ENST00000592442 SHROOM2Q13796 1616 aa7.62□□□□□ -1.19
LAMA3-213ENST00000592442 UGGT2Q9NYU1 1516 aa7.62□□□□□ -1.19
LAMA3-213ENST00000592442 ARAP1Q96P48 1450 aa7.62□□□□□ -1.19
LAMA3-213ENST00000592442 PRKD2Q9BZL6 878 aa7.61□□□□□ -1.19
LAMA3-213ENST00000592442 MAP10Q9P2G4 905 aa7.61□□□□□ -1.19
LAMA3-213ENST00000592442 SPATA31D1Q6ZQQ2 1576 aa7.61□□□□□ -1.19
LAMA3-213ENST00000592442 SLC19A1P41440 591 aa7.6□□□□□ -1.19
LAMA3-213ENST00000592442 KCNH2Q12809 1159 aa7.6□□□□□ -1.19
LAMA3-213ENST00000592442 PLA2G2CQ5R387 149 aa7.6□□□□□ -1.19
LAMA3-213ENST00000592442 EVA1BQ9NVM1 165 aa7.6□□□□□ -1.19
LAMA3-213ENST00000592442 LOC105371045A0A1W2PR82 267 aa7.59□□□□□ -1.19
LAMA3-213ENST00000592442 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
LAMA3-213ENST00000592442 APBB1O00213 710 aa7.58□□□□□ -1.2
LAMA3-213ENST00000592442 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
LAMA3-213ENST00000592442 NR6A1Q15406 480 aa7.58□□□□□ -1.2
LAMA3-213ENST00000592442 BANK1Q8NDB2 785 aa7.58□□□□□ -1.2
LAMA3-213ENST00000592442 DISP1Q96F81 1524 aa7.57□□□□□ -1.2
LAMA3-213ENST00000592442 KIAA0556O60303 1618 aa7.57□□□□□ -1.2
LAMA3-213ENST00000592442 TRIM32Q13049 653 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms