RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 ANKARQ7Z5J8 1434 aa12.95□□□□□ -0.34
RETREG3-207ENST00000589007 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
RETREG3-207ENST00000589007 GOLGB1Q14789 3259 aaKnown RBP12.94□□□□□ -0.34
RETREG3-207ENST00000589007 BTG4Q9NY30 223 aa12.94□□□□□ -0.34
RETREG3-207ENST00000589007 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
RETREG3-207ENST00000589007 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
RETREG3-207ENST00000589007 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
RETREG3-207ENST00000589007 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
RETREG3-207ENST00000589007 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
RETREG3-207ENST00000589007 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
RETREG3-207ENST00000589007 ITSN1Q15811 1721 aa12.92□□□□□ -0.34
RETREG3-207ENST00000589007 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
RETREG3-207ENST00000589007 TULP4Q9NRJ4 1543 aa12.92□□□□□ -0.34
RETREG3-207ENST00000589007 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
RETREG3-207ENST00000589007 TRIM37O94972 964 aa12.91□□□□□ -0.34
RETREG3-207ENST00000589007 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.34
RETREG3-207ENST00000589007 PRR36Q9H6K5 1346 aa12.89□□□□□ -0.35
RETREG3-207ENST00000589007 APLP2Q06481 763 aa12.89□□□□□ -0.35
RETREG3-207ENST00000589007 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-207ENST00000589007 STK26Q9P289 416 aa12.89□□□□□ -0.35
RETREG3-207ENST00000589007 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
RETREG3-207ENST00000589007 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
RETREG3-207ENST00000589007 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
RETREG3-207ENST00000589007 AKAP12Q02952 1782 aa12.87□□□□□ -0.35
RETREG3-207ENST00000589007 ATP7BP35670 1465 aa12.87□□□□□ -0.35
RETREG3-207ENST00000589007 A0A0G2JS52 829 aa12.87□□□□□ -0.35
RETREG3-207ENST00000589007 KCNQ2O43526 872 aa12.87□□□□□ -0.35
RETREG3-207ENST00000589007 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
RETREG3-207ENST00000589007 MYT1Q01538 1121 aa12.87□□□□□ -0.35
RETREG3-207ENST00000589007 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
RETREG3-207ENST00000589007 KIAA0232Q92628 1395 aa12.86□□□□□ -0.35
RETREG3-207ENST00000589007 ANKRD30BQ9BXX2 1392 aa12.86□□□□□ -0.35
RETREG3-207ENST00000589007 PTGER2P43116 358 aa12.86□□□□□ -0.35
RETREG3-207ENST00000589007 COL18A1P39060 1754 aa12.86□□□□□ -0.35
RETREG3-207ENST00000589007 APBA3O96018 575 aa12.85□□□□□ -0.35
RETREG3-207ENST00000589007 PSME1Q06323 249 aa12.85□□□□□ -0.35
RETREG3-207ENST00000589007 FAM196AQ6ZSG2 479 aa12.85□□□□□ -0.35
RETREG3-207ENST00000589007 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
RETREG3-207ENST00000589007 ACIN1Q9UKV3 1341 aaKnown RBP12.85□□□□□ -0.35
RETREG3-207ENST00000589007 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
RETREG3-207ENST00000589007 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-207ENST00000589007 SENP3-EIF4A1A0A087X0R7 540 aa12.83□□□□□ -0.36
RETREG3-207ENST00000589007 C1QTNF8P60827 252 aa12.83□□□□□ -0.36
RETREG3-207ENST00000589007 PMFBP1Q8TBY8 1022 aa12.83□□□□□ -0.36
RETREG3-207ENST00000589007 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
RETREG3-207ENST00000589007 ITGAEP38570 1179 aa12.82□□□□□ -0.36
RETREG3-207ENST00000589007 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
RETREG3-207ENST00000589007 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
RETREG3-207ENST00000589007 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
RETREG3-207ENST00000589007 PTF1AQ7RTS3 328 aa12.81□□□□□ -0.36
RETREG3-207ENST00000589007 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
RETREG3-207ENST00000589007 NHSQ6T4R5 1651 aa12.8□□□□□ -0.36
RETREG3-207ENST00000589007 CHRNA2Q15822 529 aa12.79□□□□□ -0.36
RETREG3-207ENST00000589007 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
RETREG3-207ENST00000589007 C14orf93Q9H972 538 aaKnown RBP12.79□□□□□ -0.36
RETREG3-207ENST00000589007 RGPD5Q99666 1765 aa12.79□□□□□ -0.36
RETREG3-207ENST00000589007 PROM2Q8N271 834 aa12.78□□□□□ -0.36
RETREG3-207ENST00000589007 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
RETREG3-207ENST00000589007 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
RETREG3-207ENST00000589007 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
RETREG3-207ENST00000589007 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
RETREG3-207ENST00000589007 PRDM11Q9NQV5 511 aa12.77□□□□□ -0.37
RETREG3-207ENST00000589007 CPDO75976 1380 aa12.77□□□□□ -0.37
RETREG3-207ENST00000589007 MAP3K5Q99683 1374 aa12.77□□□□□ -0.37
RETREG3-207ENST00000589007 BCL9O00512 1426 aa12.77□□□□□ -0.37
RETREG3-207ENST00000589007 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-207ENST00000589007 USP19O94966 1318 aa12.76□□□□□ -0.37
RETREG3-207ENST00000589007 SLIT3O75094 1523 aa12.76□□□□□ -0.37
RETREG3-207ENST00000589007 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-207ENST00000589007 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
RETREG3-207ENST00000589007 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
RETREG3-207ENST00000589007 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
RETREG3-207ENST00000589007 NBPF14Q5TI25 921 aa12.75□□□□□ -0.37
RETREG3-207ENST00000589007 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
RETREG3-207ENST00000589007 TRPM1Q7Z4N2 1603 aa12.75□□□□□ -0.37
RETREG3-207ENST00000589007 PIK3C2AO00443 1686 aa12.74□□□□□ -0.37
RETREG3-207ENST00000589007 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
RETREG3-207ENST00000589007 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
RETREG3-207ENST00000589007 PLSCR1O15162 318 aa12.74□□□□□ -0.37
RETREG3-207ENST00000589007 SYT17Q9BSW7 474 aa12.74□□□□□ -0.37
RETREG3-207ENST00000589007 FHDC1Q9C0D6 1143 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-207ENST00000589007 BTAF1O14981 1849 aa12.74□□□□□ -0.37
RETREG3-207ENST00000589007 ZBTB7AO95365 584 aa12.73□□□□□ -0.37
RETREG3-207ENST00000589007 STRN4Q9NRL3 753 aa12.73□□□□□ -0.37
RETREG3-207ENST00000589007 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
RETREG3-207ENST00000589007 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
RETREG3-207ENST00000589007 CRB1P82279 1406 aa12.71□□□□□ -0.37
RETREG3-207ENST00000589007 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
RETREG3-207ENST00000589007 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
RETREG3-207ENST00000589007 EIF3AQ14152 1382 aaKnown RBP12.7□□□□□ -0.38
RETREG3-207ENST00000589007 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
RETREG3-207ENST00000589007 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
RETREG3-207ENST00000589007 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-207ENST00000589007 PDE3BQ13370 1112 aa12.68□□□□□ -0.38
RETREG3-207ENST00000589007 THRAP3Q9Y2W1 955 aaKnown RBP12.68□□□□□ -0.38
RETREG3-207ENST00000589007 ABCC6O95255 1503 aa12.67□□□□□ -0.38
RETREG3-207ENST00000589007 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-207ENST00000589007 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-207ENST00000589007 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
RETREG3-207ENST00000589007 LY75O60449 1722 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms