RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 TRIM52Q96A61 297 aa6.28□□□□□ -1.4
SPIRE1-212ENST00000588236 HMX1Q9NP08 348 aaPredicted RBP6.28□□□□□ -1.4
SPIRE1-212ENST00000588236 ZNF777Q9ULD5 760 aaPredicted RBP6.28□□□□□ -1.4
SPIRE1-212ENST00000588236 PER1O15534 1290 aaPredicted RBP6.27□□□□□ -1.41
SPIRE1-212ENST00000588236 ITGBL1O95965 494 aaPredicted RBP6.27□□□□□ -1.41
SPIRE1-212ENST00000588236 NR6A1Q15406 480 aa6.27□□□□□ -1.41
SPIRE1-212ENST00000588236 CALR3Q96L12 384 aaKnown RBP6.27□□□□□ -1.41
SPIRE1-212ENST00000588236 ZBBXA8MT70 800 aa6.26□□□□□ -1.41
SPIRE1-212ENST00000588236 PDE4CQ08493 712 aa6.26□□□□□ -1.41
SPIRE1-212ENST00000588236 NR1H3Q13133 447 aa6.26□□□□□ -1.41
SPIRE1-212ENST00000588236 CCDC125Q86Z20 511 aa6.26□□□□□ -1.41
SPIRE1-212ENST00000588236 SEMA3FQ13275 785 aa6.25□□□□□ -1.41
SPIRE1-212ENST00000588236 SPNS2Q8IVW8 549 aa6.25□□□□□ -1.41
SPIRE1-212ENST00000588236 PPP1R15AO75807 674 aaPredicted RBP6.24□□□□□ -1.41
SPIRE1-212ENST00000588236 IRF5Q13568 498 aa6.24□□□□□ -1.41
SPIRE1-212ENST00000588236 ZBTB24O43167 697 aaPredicted RBP6.23□□□□□ -1.41
SPIRE1-212ENST00000588236 IFFO2Q5TF58 517 aa6.23□□□□□ -1.41
SPIRE1-212ENST00000588236 ACIN1Q9UKV3 1341 aaKnown RBP6.23□□□□□ -1.41
SPIRE1-212ENST00000588236 HDGFL1Q5TGJ6 251 aa6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 BPHLQ86WA6 291 aaPredicted RBP6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 CCDC24Q8N4L8 307 aa6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 CCDC82Q8N4S0 544 aa6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 ANKLE1Q8NAG6 615 aa6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 ZNF516Q92618 1163 aa6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 GLMNQ92990 594 aa6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 ALG2Q9H553 416 aa6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 CDV3Q9UKY7 258 aaKnown RBP6.22□□□□□ -1.41
SPIRE1-212ENST00000588236 ARID3CA6NKF2 412 aa6.21□□□□□ -1.42
SPIRE1-212ENST00000588236 LZTS3O60299 673 aaPredicted RBP6.21□□□□□ -1.42
SPIRE1-212ENST00000588236 NFATC2IPQ8NCF5 419 aa6.21□□□□□ -1.42
SPIRE1-212ENST00000588236 EPS8L1Q8TE68 723 aa6.21□□□□□ -1.42
SPIRE1-212ENST00000588236 UNC93B1Q9H1C4 597 aa6.21□□□□□ -1.42
SPIRE1-212ENST00000588236 MAP10Q9P2G4 905 aa6.21□□□□□ -1.42
SPIRE1-212ENST00000588236 TLL1O43897 1013 aa6.2□□□□□ -1.42
SPIRE1-212ENST00000588236 CD2BP2O95400 341 aaKnown RBP6.2□□□□□ -1.42
SPIRE1-212ENST00000588236 RPIAP49247 311 aa6.2□□□□□ -1.42
SPIRE1-212ENST00000588236 VAC14Q08AM6 782 aa6.2□□□□□ -1.42
SPIRE1-212ENST00000588236 ZBTB33Q86T24 672 aa6.2□□□□□ -1.42
SPIRE1-212ENST00000588236 ARHGAP9Q9BRR9 750 aa6.2□□□□□ -1.42
SPIRE1-212ENST00000588236 C1orf115Q9H7X2 142 aa6.2□□□□□ -1.42
SPIRE1-212ENST00000588236 GPR37L1O60883 481 aa6.19□□□□□ -1.42
SPIRE1-212ENST00000588236 S1PR4O95977 384 aa6.19□□□□□ -1.42
SPIRE1-212ENST00000588236 RNF20Q5VTR2 975 aa6.19□□□□□ -1.42
SPIRE1-212ENST00000588236 FCF1Q9Y324 198 aaKnown RBP6.19□□□□□ -1.42
SPIRE1-212ENST00000588236 FBXO45P0C2W1 286 aa6.18□□□□□ -1.42
SPIRE1-212ENST00000588236 WNT7BP56706 349 aa6.18□□□□□ -1.42
SPIRE1-212ENST00000588236 PRDM9Q9NQV7 894 aa6.18□□□□□ -1.42
SPIRE1-212ENST00000588236 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.18□□□□□ -1.42
SPIRE1-212ENST00000588236 AGERQ15109 404 aa6.17□□□□□ -1.42
SPIRE1-212ENST00000588236 SH3BP5LQ7L8J4 393 aa6.17□□□□□ -1.42
SPIRE1-212ENST00000588236 NKX2-3Q8TAU0 364 aa6.17□□□□□ -1.42
SPIRE1-212ENST00000588236 ARID3AQ99856 593 aa6.17□□□□□ -1.42
SPIRE1-212ENST00000588236 POM121CA8CG34 1229 aa6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 VARSP26640 1264 aaKnown RBP6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 NBPF20Q3BBV1 942 aa6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 SLFNL1Q499Z3 407 aa6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 DZIP3Q86Y13 1208 aaKnown RBP6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 SEPT12Q8IYM1 358 aa6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 ZNF511Q8NB15 262 aa6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 PPP1R12CQ9BZL4 782 aa6.16□□□□□ -1.42
SPIRE1-212ENST00000588236 RNF223E7ERA6 249 aa6.15□□□□□ -1.42
SPIRE1-212ENST00000588236 MMRN1Q13201 1228 aa6.15□□□□□ -1.42
SPIRE1-212ENST00000588236 SH3RF1Q7Z6J0 888 aa6.15□□□□□ -1.42
SPIRE1-212ENST00000588236 BAP1Q92560 729 aa6.15□□□□□ -1.42
SPIRE1-212ENST00000588236 PBXIP1Q96AQ6 731 aa6.15□□□□□ -1.42
SPIRE1-212ENST00000588236 ATP9BO43861 1147 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 PTCRAQ6ISU1 281 aaPredicted RBP6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 PPP1R18Q6NYC8 613 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 TRMT44Q8IYL2 757 aaKnown RBP6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 FAM174AQ8TBP5 190 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 ADAM32Q8TC27 787 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 SIRT1Q96EB6 747 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 SLC10A4Q96EP9 437 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 CEP126Q9P2H0 1117 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 PCDHB9Q9Y5E1 797 aa6.14□□□□□ -1.43
SPIRE1-212ENST00000588236 TRIM32Q13049 653 aa6.13□□□□□ -1.43
SPIRE1-212ENST00000588236 MPNDQ8N594 471 aa6.13□□□□□ -1.43
SPIRE1-212ENST00000588236 PALM3A6NDB9 673 aaPredicted RBP6.12□□□□□ -1.43
SPIRE1-212ENST00000588236 PLEKHM2Q8IWE5 1019 aa6.12□□□□□ -1.43
SPIRE1-212ENST00000588236 ADAMTS19Q8TE59 1207 aa6.12□□□□□ -1.43
SPIRE1-212ENST00000588236 TFIP11Q9UBB9 837 aaKnown RBP6.12□□□□□ -1.43
SPIRE1-212ENST00000588236 MAP4K5Q9Y4K4 846 aa6.12□□□□□ -1.43
SPIRE1-212ENST00000588236 MAGEB6P1A0A0J9YX57 407 aa6.11□□□□□ -1.43
SPIRE1-212ENST00000588236 PDIA4P13667 645 aaKnown RBP6.11□□□□□ -1.43
SPIRE1-212ENST00000588236 SH3BP2P78314 561 aa6.11□□□□□ -1.43
SPIRE1-212ENST00000588236 RNF135Q8IUD6 432 aa6.11□□□□□ -1.43
SPIRE1-212ENST00000588236 C1QTNF2Q9BXJ5 285 aa6.11□□□□□ -1.43
SPIRE1-212ENST00000588236 VRTNQ9H8Y1 702 aa6.11□□□□□ -1.43
SPIRE1-212ENST00000588236 PATL2C9JE40 543 aaKnown RBP6.1□□□□□ -1.43
SPIRE1-212ENST00000588236 LMOD1P29536 600 aaPredicted RBP6.1□□□□□ -1.43
SPIRE1-212ENST00000588236 ERFEQ4G0M1 354 aa6.1□□□□□ -1.43
SPIRE1-212ENST00000588236 TRIM50Q86XT4 487 aa6.1□□□□□ -1.43
SPIRE1-212ENST00000588236 CHIC2Q9UKJ5 165 aa6.1□□□□□ -1.43
SPIRE1-212ENST00000588236 ATP5J2-PTCD1G3V325 749 aa6.09□□□□□ -1.43
SPIRE1-212ENST00000588236 CSB-PGBD3P0DP91 1061 aa6.09□□□□□ -1.43
SPIRE1-212ENST00000588236 SKIP12755 728 aa6.09□□□□□ -1.43
SPIRE1-212ENST00000588236 ATP1A2P50993 1020 aa6.09□□□□□ -1.43
SPIRE1-212ENST00000588236 DHX9Q08211 1270 aaKnown RBP6.09□□□□□ -1.43
SPIRE1-212ENST00000588236 USP4Q13107 963 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms