RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TRIM37O94972 964 aa12.77□□□□□ -0.37
SDF2-204ENST00000587338 CFAP70Q5T0N1 1121 aa12.77□□□□□ -0.37
SDF2-204ENST00000587338 C14orf93Q9H972 538 aaKnown RBP12.77□□□□□ -0.37
SDF2-204ENST00000587338 POGKQ9P215 609 aa12.77□□□□□ -0.37
SDF2-204ENST00000587338 CAMKK2Q96RR4 588 aa12.76□□□□□ -0.37
SDF2-204ENST00000587338 PRDM11Q9NQV5 511 aa12.76□□□□□ -0.37
SDF2-204ENST00000587338 ALS2Q96Q42 1657 aa12.76□□□□□ -0.37
SDF2-204ENST00000587338 APBA3O96018 575 aa12.75□□□□□ -0.37
SDF2-204ENST00000587338 HIRIP3Q9BW71 556 aaPredicted RBP12.75□□□□□ -0.37
SDF2-204ENST00000587338 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
SDF2-204ENST00000587338 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
SDF2-204ENST00000587338 FAM196AQ6ZSG2 479 aa12.74□□□□□ -0.37
SDF2-204ENST00000587338 MPHOSPH9Q99550 1183 aa12.74□□□□□ -0.37
SDF2-204ENST00000587338 STRN4Q9NRL3 753 aa12.74□□□□□ -0.37
SDF2-204ENST00000587338 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
SDF2-204ENST00000587338 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
SDF2-204ENST00000587338 DLC1Q96QB1 1528 aa12.72□□□□□ -0.37
SDF2-204ENST00000587338 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
SDF2-204ENST00000587338 KIAA0232Q92628 1395 aa12.72□□□□□ -0.37
SDF2-204ENST00000587338 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
SDF2-204ENST00000587338 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
SDF2-204ENST00000587338 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
SDF2-204ENST00000587338 USP35Q9P2H5 1018 aa12.72□□□□□ -0.37
SDF2-204ENST00000587338 PPP1R1BQ9UD71 204 aaPredicted RBP12.72□□□□□ -0.37
SDF2-204ENST00000587338 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
SDF2-204ENST00000587338 NGDNQ8NEJ9 315 aaKnown RBP12.71□□□□□ -0.37
SDF2-204ENST00000587338 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.38
SDF2-204ENST00000587338 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
SDF2-204ENST00000587338 NBPF14Q5TI25 921 aa12.7□□□□□ -0.38
SDF2-204ENST00000587338 TRAK1Q9UPV9 953 aa12.7□□□□□ -0.38
SDF2-204ENST00000587338 NUP188Q5SRE5 1749 aa12.69□□□□□ -0.38
SDF2-204ENST00000587338 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
SDF2-204ENST00000587338 RREB1Q92766 1687 aa12.69□□□□□ -0.38
SDF2-204ENST00000587338 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
SDF2-204ENST00000587338 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
SDF2-204ENST00000587338 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
SDF2-204ENST00000587338 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
SDF2-204ENST00000587338 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
SDF2-204ENST00000587338 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
SDF2-204ENST00000587338 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
SDF2-204ENST00000587338 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
SDF2-204ENST00000587338 EVA1CP58658 441 aa12.66□□□□□ -0.38
SDF2-204ENST00000587338 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
SDF2-204ENST00000587338 NINLQ9Y2I6 1382 aa12.66□□□□□ -0.38
SDF2-204ENST00000587338 KCNQ2O43526 872 aa12.65□□□□□ -0.38
SDF2-204ENST00000587338 ATP7BP35670 1465 aa12.65□□□□□ -0.38
SDF2-204ENST00000587338 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
SDF2-204ENST00000587338 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
SDF2-204ENST00000587338 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
SDF2-204ENST00000587338 NUDT16Q96DE0 195 aaKnown RBP12.62□□□□□ -0.39
SDF2-204ENST00000587338 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
SDF2-204ENST00000587338 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
SDF2-204ENST00000587338 UTRNP46939 3433 aa12.61□□□□□ -0.39
SDF2-204ENST00000587338 KDM2AQ9Y2K7 1162 aa12.61□□□□□ -0.39
SDF2-204ENST00000587338 LMO7Q8WWI1 1683 aa12.59□□□□□ -0.39
SDF2-204ENST00000587338 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
SDF2-204ENST00000587338 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
SDF2-204ENST00000587338 OVOS2A0A0G2JMS6 1433 aa12.59□□□□□ -0.39
SDF2-204ENST00000587338 OVOS2A0A0J9YW53 1432 aa12.59□□□□□ -0.39
SDF2-204ENST00000587338 OVOS2Q6IE36 1432 aa12.59□□□□□ -0.39
SDF2-204ENST00000587338 ACEP12821 1306 aa12.59□□□□□ -0.39
SDF2-204ENST00000587338 CPDO75976 1380 aa12.58□□□□□ -0.4
SDF2-204ENST00000587338 ABTB2Q8N961 1025 aa12.58□□□□□ -0.4
SDF2-204ENST00000587338 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
SDF2-204ENST00000587338 PARP4Q9UKK3 1724 aaKnown RBP12.58□□□□□ -0.4
SDF2-204ENST00000587338 POLR3AO14802 1390 aaPredicted RBP12.57□□□□□ -0.4
SDF2-204ENST00000587338 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
SDF2-204ENST00000587338 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
SDF2-204ENST00000587338 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
SDF2-204ENST00000587338 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
SDF2-204ENST00000587338 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
SDF2-204ENST00000587338 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
SDF2-204ENST00000587338 USP19O94966 1318 aa12.57□□□□□ -0.4
SDF2-204ENST00000587338 ZNF784Q8NCA9 323 aaPredicted RBP12.56□□□□□ -0.4
SDF2-204ENST00000587338 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
SDF2-204ENST00000587338 PDGFDQ9GZP0 370 aaPredicted RBP12.56□□□□□ -0.4
SDF2-204ENST00000587338 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
SDF2-204ENST00000587338 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
SDF2-204ENST00000587338 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
SDF2-204ENST00000587338 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
SDF2-204ENST00000587338 CRB1P82279 1406 aa12.55□□□□□ -0.4
SDF2-204ENST00000587338 PEAK1Q9H792 1746 aa12.55□□□□□ -0.4
SDF2-204ENST00000587338 PLSCR1O15162 318 aa12.55□□□□□ -0.4
SDF2-204ENST00000587338 CCDC61Q9Y6R9 512 aa12.55□□□□□ -0.4
SDF2-204ENST00000587338 MYOM1P52179 1685 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 MSH5O43196 834 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 GCP02774 474 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 DDB1Q16531 1140 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 NLRP13Q86W25 1043 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 LRRC37A3O60309 1634 aa12.54□□□□□ -0.4
SDF2-204ENST00000587338 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
SDF2-204ENST00000587338 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
SDF2-204ENST00000587338 PTGER2P43116 358 aa12.52□□□□□ -0.41
SDF2-204ENST00000587338 CEP350Q5VT06 3117 aa12.52□□□□□ -0.41
SDF2-204ENST00000587338 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
SDF2-204ENST00000587338 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
SDF2-204ENST00000587338 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
SDF2-204ENST00000587338 STK32BQ9NY57 414 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms