RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
GGA3-219ENST00000584550 POGKQ9P215 609 aa15.23■□□□□ 0.03
GGA3-219ENST00000584550 USP35Q9P2H5 1018 aa15.23■□□□□ 0.03
GGA3-219ENST00000584550 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
GGA3-219ENST00000584550 C14orf93Q9H972 538 aaKnown RBP15.22■□□□□ 0.03
GGA3-219ENST00000584550 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
GGA3-219ENST00000584550 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
GGA3-219ENST00000584550 TRPM3Q9HCF6 1732 aaPredicted RBP15.22■□□□□ 0.03
GGA3-219ENST00000584550 DHX57Q6P158 1386 aaKnown RBP15.22■□□□□ 0.03
GGA3-219ENST00000584550 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
GGA3-219ENST00000584550 SPATA31A1Q5TZJ5 1347 aa15.2■□□□□ 0.02
GGA3-219ENST00000584550 ALS2Q96Q42 1657 aa15.2■□□□□ 0.02
GGA3-219ENST00000584550 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
GGA3-219ENST00000584550 ADGRB2O60241 1585 aa15.19■□□□□ 0.02
GGA3-219ENST00000584550 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
GGA3-219ENST00000584550 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
GGA3-219ENST00000584550 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
GGA3-219ENST00000584550 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
GGA3-219ENST00000584550 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
GGA3-219ENST00000584550 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
GGA3-219ENST00000584550 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
GGA3-219ENST00000584550 NGDNQ8NEJ9 315 aaKnown RBP15.17■□□□□ 0.02
GGA3-219ENST00000584550 MPHOSPH9Q99550 1183 aa15.17■□□□□ 0.02
GGA3-219ENST00000584550 NUP188Q5SRE5 1749 aa15.17■□□□□ 0.02
GGA3-219ENST00000584550 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
GGA3-219ENST00000584550 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
GGA3-219ENST00000584550 PARD3Q8TEW0 1356 aa15.16■□□□□ 0.02
GGA3-219ENST00000584550 EVA1CP58658 441 aa15.16■□□□□ 0.02
GGA3-219ENST00000584550 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
GGA3-219ENST00000584550 NUTM2GQ5VZR2 741 aa15.16■□□□□ 0.02
GGA3-219ENST00000584550 SPON1Q9HCB6 807 aa15.16■□□□□ 0.02
GGA3-219ENST00000584550 TRAK1Q9UPV9 953 aa15.16■□□□□ 0.02
GGA3-219ENST00000584550 RREB1Q92766 1687 aa15.16■□□□□ 0.02
GGA3-219ENST00000584550 CRYBG1Q9Y4K1 1723 aa15.15■□□□□ 0.02
GGA3-219ENST00000584550 KCNQ2O43526 872 aa15.15■□□□□ 0.02
GGA3-219ENST00000584550 CAMTA1Q9Y6Y1 1673 aa15.14■□□□□ 0.01
GGA3-219ENST00000584550 UTRNP46939 3433 aa15.12■□□□□ 0.01
GGA3-219ENST00000584550 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
GGA3-219ENST00000584550 LARP1Q6PKG0 1096 aaKnown RBP15.11■□□□□ 0.01
GGA3-219ENST00000584550 BARGINQ6ZT62 677 aa15.1■□□□□ 0.01
GGA3-219ENST00000584550 DLC1Q96QB1 1528 aa15.1■□□□□ 0.01
GGA3-219ENST00000584550 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
GGA3-219ENST00000584550 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
GGA3-219ENST00000584550 PHRF1Q9P1Y6 1649 aaKnown RBP15.08■□□□□ 0
GGA3-219ENST00000584550 TCP11L2Q8N4U5 519 aa15.08■□□□□ 0
GGA3-219ENST00000584550 PDGFDQ9GZP0 370 aaPredicted RBP15.08■□□□□ 0
GGA3-219ENST00000584550 EIF3AQ14152 1382 aaKnown RBP15.08■□□□□ 0
GGA3-219ENST00000584550 SSH2Q76I76 1423 aa15.08■□□□□ 0
GGA3-219ENST00000584550 ZNF784Q8NCA9 323 aaPredicted RBP15.07■□□□□ 0
GGA3-219ENST00000584550 NUDT16Q96DE0 195 aaKnown RBP15.06■□□□□ 0
GGA3-219ENST00000584550 KDM2AQ9Y2K7 1162 aa15.06■□□□□ 0
GGA3-219ENST00000584550 ZBTB7AO95365 584 aa15.05■□□□□ -0
GGA3-219ENST00000584550 ADGRB1O14514 1584 aa15.05■□□□□ -0
GGA3-219ENST00000584550 SENP3-EIF4A1A0A087X0R7 540 aa15.04■□□□□ -0
GGA3-219ENST00000584550 ANO8Q9HCE9 1232 aaPredicted RBP15.04■□□□□ -0
GGA3-219ENST00000584550 NRKQ7Z2Y5 1582 aa15.03■□□□□ -0
GGA3-219ENST00000584550 ZBTB7CA1YPR0 619 aa15.03■□□□□ -0
GGA3-219ENST00000584550 PTF1AQ7RTS3 328 aa15.03■□□□□ -0
GGA3-219ENST00000584550 ABTB2Q8N961 1025 aa15.03■□□□□ -0
GGA3-219ENST00000584550 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
GGA3-219ENST00000584550 BCL11BQ9C0K0 894 aaPredicted RBP15.02■□□□□ -0
GGA3-219ENST00000584550 ITSN1Q15811 1721 aa15.01□□□□□ -0.01
GGA3-219ENST00000584550 ACEP12821 1306 aa15.01□□□□□ -0.01
GGA3-219ENST00000584550 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
GGA3-219ENST00000584550 THRAP3Q9Y2W1 955 aaKnown RBP15.01□□□□□ -0.01
GGA3-219ENST00000584550 ATP7BP35670 1465 aa15.01□□□□□ -0.01
GGA3-219ENST00000584550 MYOM1P52179 1685 aa15□□□□□ -0.01
GGA3-219ENST00000584550 PLSCR1O15162 318 aa15□□□□□ -0.01
GGA3-219ENST00000584550 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
GGA3-219ENST00000584550 CASZ1Q86V15 1759 aa15□□□□□ -0.01
GGA3-219ENST00000584550 PTGER2P43116 358 aa14.99□□□□□ -0.01
GGA3-219ENST00000584550 PROM2Q8N271 834 aa14.99□□□□□ -0.01
GGA3-219ENST00000584550 PARP4Q9UKK3 1724 aaKnown RBP14.99□□□□□ -0.01
GGA3-219ENST00000584550 LMO7Q8WWI1 1683 aa14.99□□□□□ -0.01
GGA3-219ENST00000584550 SBF2Q86WG5 1849 aa14.99□□□□□ -0.01
GGA3-219ENST00000584550 FHDC1Q9C0D6 1143 aaPredicted RBP14.98□□□□□ -0.01
GGA3-219ENST00000584550 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
GGA3-219ENST00000584550 OVOS2A0A0J9YW53 1432 aa14.98□□□□□ -0.01
GGA3-219ENST00000584550 OVOS2Q6IE36 1432 aa14.98□□□□□ -0.01
GGA3-219ENST00000584550 GCP02774 474 aa14.97□□□□□ -0.01
GGA3-219ENST00000584550 C1QTNF8P60827 252 aa14.97□□□□□ -0.01
GGA3-219ENST00000584550 DDB1Q16531 1140 aa14.97□□□□□ -0.01
GGA3-219ENST00000584550 SYT17Q9BSW7 474 aa14.97□□□□□ -0.01
GGA3-219ENST00000584550 PEAK1Q9H792 1746 aa14.97□□□□□ -0.01
GGA3-219ENST00000584550 CPDO75976 1380 aa14.97□□□□□ -0.01
GGA3-219ENST00000584550 COL5A2P05997 1499 aaPredicted RBP14.96□□□□□ -0.01
GGA3-219ENST00000584550 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.01
GGA3-219ENST00000584550 POLR3AO14802 1390 aaPredicted RBP14.96□□□□□ -0.02
GGA3-219ENST00000584550 TOM1L2Q6ZVM7 507 aa14.95□□□□□ -0.02
GGA3-219ENST00000584550 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
GGA3-219ENST00000584550 CCDC61Q9Y6R9 512 aa14.95□□□□□ -0.02
GGA3-219ENST00000584550 RGPD3A6NKT7 1758 aaPredicted RBP14.95□□□□□ -0.02
GGA3-219ENST00000584550 RGPD4Q7Z3J3 1758 aa14.95□□□□□ -0.02
GGA3-219ENST00000584550 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
GGA3-219ENST00000584550 CRB1P82279 1406 aa14.94□□□□□ -0.02
GGA3-219ENST00000584550 MARCH10Q8NA82 808 aaPredicted RBP14.94□□□□□ -0.02
GGA3-219ENST00000584550 STK32BQ9NY57 414 aa14.94□□□□□ -0.02
GGA3-219ENST00000584550 LRRC37A3O60309 1634 aa14.94□□□□□ -0.02
GGA3-219ENST00000584550 USP19O94966 1318 aa14.93□□□□□ -0.02
GGA3-219ENST00000584550 PLEKHG3A1L390 1219 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms