RNA–Protein interactions for RNA: ENST00000580110.5

TRIM16-219, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 580 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-219	ENST00000580110	PARD3	Q8TEW0	1356 aa		18.99	■□□□□ 0.63
TRIM16-219	ENST00000580110	PRAM1	Q96QH2	718 aa		18.99	■□□□□ 0.63
TRIM16-219	ENST00000580110	FAM196A	Q6ZSG2	479 aa		18.98	■□□□□ 0.63
TRIM16-219	ENST00000580110	GPRASP1	Q5JY77	1395 aa		18.97	■□□□□ 0.63
TRIM16-219	ENST00000580110	C14orf93	Q9H972	538 aa	Known RBP	18.97	■□□□□ 0.63
TRIM16-219	ENST00000580110	PRDM11	Q9NQV5	511 aa		18.97	■□□□□ 0.63
TRIM16-219	ENST00000580110	APBA3	O96018	575 aa		18.96	■□□□□ 0.63
TRIM16-219	ENST00000580110	SPATA31A1	Q5TZJ5	1347 aa		18.95	■□□□□ 0.62
TRIM16-219	ENST00000580110	ACIN1	Q9UKV3	1341 aa	Known RBP	18.95	■□□□□ 0.62
TRIM16-219	ENST00000580110	CRYBG1	Q9Y4K1	1723 aa		18.94	■□□□□ 0.62
TRIM16-219	ENST00000580110	CFAP70	Q5T0N1	1121 aa		18.94	■□□□□ 0.62
TRIM16-219	ENST00000580110	POGK	Q9P215	609 aa		18.94	■□□□□ 0.62
TRIM16-219	ENST00000580110	RREB1	Q92766	1687 aa		18.94	■□□□□ 0.62
TRIM16-219	ENST00000580110	NUP188	Q5SRE5	1749 aa		18.93	■□□□□ 0.62
TRIM16-219	ENST00000580110	DLC1	Q96QB1	1528 aa		18.93	■□□□□ 0.62
TRIM16-219	ENST00000580110	NBPF8	Q3BBV2	869 aa		18.92	■□□□□ 0.62
TRIM16-219	ENST00000580110	NBPF14	Q5TI25	921 aa		18.92	■□□□□ 0.62
TRIM16-219	ENST00000580110	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.92	■□□□□ 0.62
TRIM16-219	ENST00000580110	DCAF8L1	A6NGE4	600 aa		18.91	■□□□□ 0.62
TRIM16-219	ENST00000580110	STRN4	Q9NRL3	753 aa		18.91	■□□□□ 0.62
TRIM16-219	ENST00000580110	PAK3	O75914	559 aa	Predicted RBP	18.9	■□□□□ 0.62
TRIM16-219	ENST00000580110	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.9	■□□□□ 0.62
TRIM16-219	ENST00000580110	EIF3A	Q14152	1382 aa	Known RBP	18.9	■□□□□ 0.62
TRIM16-219	ENST00000580110	KIAA0232	Q92628	1395 aa		18.9	■□□□□ 0.62
TRIM16-219	ENST00000580110	CHRNA2	Q15822	529 aa		18.89	■□□□□ 0.61
TRIM16-219	ENST00000580110	SPON1	Q9HCB6	807 aa		18.89	■□□□□ 0.61
TRIM16-219	ENST00000580110	PRR36	Q9H6K5	1346 aa		18.89	■□□□□ 0.61
TRIM16-219	ENST00000580110	TULP4	Q9NRJ4	1543 aa		18.89	■□□□□ 0.61
TRIM16-219	ENST00000580110	NGDN	Q8NEJ9	315 aa	Known RBP	18.88	■□□□□ 0.61
TRIM16-219	ENST00000580110	MPHOSPH9	Q99550	1183 aa		18.88	■□□□□ 0.61
TRIM16-219	ENST00000580110	USP35	Q9P2H5	1018 aa		18.88	■□□□□ 0.61
TRIM16-219	ENST00000580110	NINL	Q9Y2I6	1382 aa		18.88	■□□□□ 0.61
TRIM16-219	ENST00000580110	PDE3B	Q13370	1112 aa		18.87	■□□□□ 0.61
TRIM16-219	ENST00000580110	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.86	■□□□□ 0.61
TRIM16-219	ENST00000580110	KCNQ2	O43526	872 aa		18.86	■□□□□ 0.61
TRIM16-219	ENST00000580110	BARGIN	Q6ZT62	677 aa		18.85	■□□□□ 0.61
TRIM16-219	ENST00000580110	PHRF1	Q9P1Y6	1649 aa	Known RBP	18.85	■□□□□ 0.61
TRIM16-219	ENST00000580110	TRAK1	Q9UPV9	953 aa		18.84	■□□□□ 0.61
TRIM16-219	ENST00000580110	SSH2	Q76I76	1423 aa		18.83	■□□□□ 0.61
TRIM16-219	ENST00000580110	WASL	O00401	505 aa	Predicted RBP	18.83	■□□□□ 0.6
TRIM16-219	ENST00000580110	ZC3H6	P61129	1189 aa	Known RBP	18.83	■□□□□ 0.6
TRIM16-219	ENST00000580110	ADGRB1	O14514	1584 aa		18.82	■□□□□ 0.6
TRIM16-219	ENST00000580110	EVA1C	P58658	441 aa		18.82	■□□□□ 0.6
TRIM16-219	ENST00000580110	ATP7B	P35670	1465 aa		18.81	■□□□□ 0.6
TRIM16-219	ENST00000580110	CAMTA1	Q9Y6Y1	1673 aa		18.81	■□□□□ 0.6
TRIM16-219	ENST00000580110	LARP1	Q6PKG0	1096 aa	Known RBP	18.79	■□□□□ 0.6
TRIM16-219	ENST00000580110	TCP11L2	Q8N4U5	519 aa		18.79	■□□□□ 0.6
TRIM16-219	ENST00000580110	ITSN1	Q15811	1721 aa		18.78	■□□□□ 0.6
TRIM16-219	ENST00000580110	NUTM2G	Q5VZR2	741 aa		18.78	■□□□□ 0.6
TRIM16-219	ENST00000580110	UTRN	P46939	3433 aa		18.76	■□□□□ 0.59
TRIM16-219	ENST00000580110	NRK	Q7Z2Y5	1582 aa		18.76	■□□□□ 0.59
TRIM16-219	ENST00000580110	ZNF784	Q8NCA9	323 aa	Predicted RBP	18.75	■□□□□ 0.59
TRIM16-219	ENST00000580110	THRAP3	Q9Y2W1	955 aa	Known RBP	18.75	■□□□□ 0.59
TRIM16-219	ENST00000580110	PARP4	Q9UKK3	1724 aa	Known RBP	18.74	■□□□□ 0.59
TRIM16-219	ENST00000580110	LMO7	Q8WWI1	1683 aa		18.74	■□□□□ 0.59
TRIM16-219	ENST00000580110	C11orf95	C9JLR9	678 aa	Predicted RBP	18.74	■□□□□ 0.59
TRIM16-219	ENST00000580110	NUDT16	Q96DE0	195 aa	Known RBP	18.74	■□□□□ 0.59
TRIM16-219	ENST00000580110	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.73	■□□□□ 0.59
TRIM16-219	ENST00000580110	RGPD4	Q7Z3J3	1758 aa		18.73	■□□□□ 0.59
TRIM16-219	ENST00000580110	CASZ1	Q86V15	1759 aa		18.73	■□□□□ 0.59
TRIM16-219	ENST00000580110	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.73	■□□□□ 0.59
TRIM16-219	ENST00000580110	OVOS2	A0A0G2JMS6	1433 aa		18.73	■□□□□ 0.59
TRIM16-219	ENST00000580110	OVOS2	A0A0J9YW53	1432 aa		18.73	■□□□□ 0.59
TRIM16-219	ENST00000580110	OVOS2	Q6IE36	1432 aa		18.73	■□□□□ 0.59
TRIM16-219	ENST00000580110	CPD	O75976	1380 aa		18.72	■□□□□ 0.59
TRIM16-219	ENST00000580110	PLSCR1	O15162	318 aa		18.71	■□□□□ 0.59
TRIM16-219	ENST00000580110	POLR3A	O14802	1390 aa	Predicted RBP	18.7	■□□□□ 0.58
TRIM16-219	ENST00000580110	PEAK1	Q9H792	1746 aa		18.7	■□□□□ 0.58
TRIM16-219	ENST00000580110	MYOM1	P52179	1685 aa		18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	SENP3-EIF4A1	A0A087X0R7	540 aa		18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	ZBTB7A	O95365	584 aa		18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	ABTB2	Q8N961	1025 aa		18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	COL5A2	P05997	1499 aa	Predicted RBP	18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	USP19	O94966	1318 aa		18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	ACE	P12821	1306 aa		18.69	■□□□□ 0.58
TRIM16-219	ENST00000580110	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.68	■□□□□ 0.58
TRIM16-219	ENST00000580110	SBF2	Q86WG5	1849 aa		18.67	■□□□□ 0.58
TRIM16-219	ENST00000580110	TOPAZ1	Q8N9V7	1692 aa		18.67	■□□□□ 0.58
TRIM16-219	ENST00000580110	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.67	■□□□□ 0.58
TRIM16-219	ENST00000580110	KDM2A	Q9Y2K7	1162 aa		18.67	■□□□□ 0.58
TRIM16-219	ENST00000580110	CRB1	P82279	1406 aa		18.66	■□□□□ 0.58
TRIM16-219	ENST00000580110	PTGER2	P43116	358 aa		18.66	■□□□□ 0.58
TRIM16-219	ENST00000580110	LRRC37A3	O60309	1634 aa		18.66	■□□□□ 0.58
TRIM16-219	ENST00000580110	CDK19	Q9BWU1	502 aa		18.65	■□□□□ 0.58
TRIM16-219	ENST00000580110	CCDC61	Q9Y6R9	512 aa		18.65	■□□□□ 0.58
TRIM16-219	ENST00000580110	GC	P02774	474 aa		18.64	■□□□□ 0.57
TRIM16-219	ENST00000580110	DDB1	Q16531	1140 aa		18.64	■□□□□ 0.57
TRIM16-219	ENST00000580110	PTF1A	Q7RTS3	328 aa		18.64	■□□□□ 0.57
TRIM16-219	ENST00000580110	DCAF11	Q8TEB1	546 aa		18.64	■□□□□ 0.57
TRIM16-219	ENST00000580110	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.64	■□□□□ 0.57
TRIM16-219	ENST00000580110	C1QTNF8	P60827	252 aa		18.63	■□□□□ 0.57
TRIM16-219	ENST00000580110	NLRP13	Q86W25	1043 aa		18.63	■□□□□ 0.57
TRIM16-219	ENST00000580110	FHDC1	Q9C0D6	1143 aa	Predicted RBP	18.63	■□□□□ 0.57
TRIM16-219	ENST00000580110	CHD4	Q14839	1912 aa		18.62	■□□□□ 0.57
TRIM16-219	ENST00000580110	PLEKHG3	A1L390	1219 aa		18.62	■□□□□ 0.57
TRIM16-219	ENST00000580110	PROM2	Q8N271	834 aa		18.62	■□□□□ 0.57
TRIM16-219	ENST00000580110	SYT17	Q9BSW7	474 aa		18.62	■□□□□ 0.57
TRIM16-219	ENST00000580110	ZBTB7C	A1YPR0	619 aa		18.61	■□□□□ 0.57
TRIM16-219	ENST00000580110	STK32B	Q9NY57	414 aa		18.61	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms