RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 SPATA31A7Q8IWB4 1347 aa18.11■□□□□ 0.49
CDK5RAP3-216ENST00000579853 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
CDK5RAP3-216ENST00000579853 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
CDK5RAP3-216ENST00000579853 ALS2Q96Q42 1657 aa18.09■□□□□ 0.49
CDK5RAP3-216ENST00000579853 R3HDM1Q15032 1099 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP3-216ENST00000579853 PRDM11Q9NQV5 511 aa18.07■□□□□ 0.48
CDK5RAP3-216ENST00000579853 FAM196AQ6ZSG2 479 aa18.06■□□□□ 0.48
CDK5RAP3-216ENST00000579853 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
CDK5RAP3-216ENST00000579853 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
CDK5RAP3-216ENST00000579853 NGDNQ8NEJ9 315 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-216ENST00000579853 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
CDK5RAP3-216ENST00000579853 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-216ENST00000579853 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
CDK5RAP3-216ENST00000579853 SPATA31A1Q5TZJ5 1347 aa18.03■□□□□ 0.48
CDK5RAP3-216ENST00000579853 WASLO00401 505 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-216ENST00000579853 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-216ENST00000579853 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP3-216ENST00000579853 ADGRB1O14514 1584 aa18.02■□□□□ 0.48
CDK5RAP3-216ENST00000579853 EZH2Q15910 746 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-216ENST00000579853 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.48
CDK5RAP3-216ENST00000579853 TRAK1Q9UPV9 953 aa18.02■□□□□ 0.48
CDK5RAP3-216ENST00000579853 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-216ENST00000579853 PRR36Q9H6K5 1346 aa18.01■□□□□ 0.47
CDK5RAP3-216ENST00000579853 STAC3Q96MF2 364 aa18.01■□□□□ 0.47
CDK5RAP3-216ENST00000579853 CRYBG1Q9Y4K1 1723 aa18.01■□□□□ 0.47
CDK5RAP3-216ENST00000579853 TRIM37O94972 964 aa18■□□□□ 0.47
CDK5RAP3-216ENST00000579853 APBA3O96018 575 aa17.99■□□□□ 0.47
CDK5RAP3-216ENST00000579853 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
CDK5RAP3-216ENST00000579853 NBPF14Q5TI25 921 aa17.98■□□□□ 0.47
CDK5RAP3-216ENST00000579853 KIAA0232Q92628 1395 aa17.98■□□□□ 0.47
CDK5RAP3-216ENST00000579853 ITSN1Q15811 1721 aa17.98■□□□□ 0.47
CDK5RAP3-216ENST00000579853 ATP7BP35670 1465 aa17.97■□□□□ 0.47
CDK5RAP3-216ENST00000579853 PDE3BQ13370 1112 aa17.97■□□□□ 0.47
CDK5RAP3-216ENST00000579853 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
CDK5RAP3-216ENST00000579853 STRN4Q9NRL3 753 aa17.97■□□□□ 0.47
CDK5RAP3-216ENST00000579853 C11orf95C9JLR9 678 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-216ENST00000579853 EVA1CP58658 441 aa17.95■□□□□ 0.46
CDK5RAP3-216ENST00000579853 CHRNA2Q15822 529 aa17.94■□□□□ 0.46
CDK5RAP3-216ENST00000579853 NUDT16Q96DE0 195 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-216ENST00000579853 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CDK5RAP3-216ENST00000579853 ZC3H6P61129 1189 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-216ENST00000579853 PHRF1Q9P1Y6 1649 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-216ENST00000579853 YY1P25490 414 aa17.92■□□□□ 0.46
CDK5RAP3-216ENST00000579853 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
CDK5RAP3-216ENST00000579853 USP35Q9P2H5 1018 aa17.92■□□□□ 0.46
CDK5RAP3-216ENST00000579853 SSH2Q76I76 1423 aa17.91■□□□□ 0.46
CDK5RAP3-216ENST00000579853 RREB1Q92766 1687 aa17.91■□□□□ 0.46
CDK5RAP3-216ENST00000579853 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
CDK5RAP3-216ENST00000579853 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
CDK5RAP3-216ENST00000579853 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-216ENST00000579853 SPON1Q9HCB6 807 aa17.9■□□□□ 0.46
CDK5RAP3-216ENST00000579853 PPP1R1BQ9UD71 204 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-216ENST00000579853 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-216ENST00000579853 UTRNP46939 3433 aa17.89■□□□□ 0.46
CDK5RAP3-216ENST00000579853 CCDC61Q9Y6R9 512 aa17.89■□□□□ 0.45
CDK5RAP3-216ENST00000579853 CPDO75976 1380 aa17.89■□□□□ 0.45
CDK5RAP3-216ENST00000579853 NUP188Q5SRE5 1749 aa17.87■□□□□ 0.45
CDK5RAP3-216ENST00000579853 ARHGEF28Q8N1W1 1705 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-216ENST00000579853 PLEKHG3A1L390 1219 aa17.87■□□□□ 0.45
CDK5RAP3-216ENST00000579853 NUTM2GQ5VZR2 741 aa17.87■□□□□ 0.45
CDK5RAP3-216ENST00000579853 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
CDK5RAP3-216ENST00000579853 CDK19Q9BWU1 502 aa17.87■□□□□ 0.45
CDK5RAP3-216ENST00000579853 ACEP12821 1306 aa17.87■□□□□ 0.45
CDK5RAP3-216ENST00000579853 KCNQ2O43526 872 aa17.86■□□□□ 0.45
CDK5RAP3-216ENST00000579853 LARP1Q6PKG0 1096 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-216ENST00000579853 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
CDK5RAP3-216ENST00000579853 NLRP13Q86W25 1043 aa17.85■□□□□ 0.45
CDK5RAP3-216ENST00000579853 CAMTA1Q9Y6Y1 1673 aa17.85■□□□□ 0.45
CDK5RAP3-216ENST00000579853 NRKQ7Z2Y5 1582 aa17.84■□□□□ 0.45
CDK5RAP3-216ENST00000579853 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
CDK5RAP3-216ENST00000579853 USP19O94966 1318 aa17.84■□□□□ 0.45
CDK5RAP3-216ENST00000579853 BRD4O60885 1362 aaPredicted RBP17.83■□□□□ 0.45
CDK5RAP3-216ENST00000579853 PARP4Q9UKK3 1724 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-216ENST00000579853 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.44
CDK5RAP3-216ENST00000579853 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.44
CDK5RAP3-216ENST00000579853 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
CDK5RAP3-216ENST00000579853 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
CDK5RAP3-216ENST00000579853 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
CDK5RAP3-216ENST00000579853 PLSCR1O15162 318 aa17.81■□□□□ 0.44
CDK5RAP3-216ENST00000579853 GCP02774 474 aa17.81■□□□□ 0.44
CDK5RAP3-216ENST00000579853 RGPD3A6NKT7 1758 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-216ENST00000579853 RGPD4Q7Z3J3 1758 aa17.8■□□□□ 0.44
CDK5RAP3-216ENST00000579853 CRB1P82279 1406 aa17.8■□□□□ 0.44
CDK5RAP3-216ENST00000579853 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-216ENST00000579853 DDB1Q16531 1140 aa17.77■□□□□ 0.44
CDK5RAP3-216ENST00000579853 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-216ENST00000579853 CDCA7Q9BWT1 371 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-216ENST00000579853 BCL11BQ9C0K0 894 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-216ENST00000579853 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
CDK5RAP3-216ENST00000579853 KIAA1210Q9ULL0 1709 aa17.75■□□□□ 0.43
CDK5RAP3-216ENST00000579853 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
CDK5RAP3-216ENST00000579853 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
CDK5RAP3-216ENST00000579853 SBF2Q86WG5 1849 aa17.74■□□□□ 0.43
CDK5RAP3-216ENST00000579853 NLRP6P59044 892 aa17.73■□□□□ 0.43
CDK5RAP3-216ENST00000579853 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
CDK5RAP3-216ENST00000579853 BCL9O00512 1426 aa17.72■□□□□ 0.43
CDK5RAP3-216ENST00000579853 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
CDK5RAP3-216ENST00000579853 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
CDK5RAP3-216ENST00000579853 CENPJQ9HC77 1338 aaPredicted RBP17.71■□□□□ 0.42
CDK5RAP3-216ENST00000579853 ANO8Q9HCE9 1232 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms