RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 SLF2Q8IX21 1173 aa6.17□□□□□ -1.42
GAPLINC-201ENST00000578664 GIPC2Q8TF65 315 aa6.17□□□□□ -1.42
GAPLINC-201ENST00000578664 GJD4Q96KN9 370 aaPredicted RBP6.17□□□□□ -1.42
GAPLINC-201ENST00000578664 DDX11L8A8MPP1 907 aa6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 LILRB3O75022 631 aa6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 AP1G2O75843 785 aa6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 MARSP56192 900 aaKnown RBP6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 NAALADL2Q58DX5 795 aa6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 ANKK1Q8NFD2 765 aa6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 LRCH3Q96II8 777 aa6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 STAC3Q96MF2 364 aa6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 MAFBQ9Y5Q3 323 aaPredicted RBP6.16□□□□□ -1.42
GAPLINC-201ENST00000578664 SOWAHDA6NJG2 315 aa6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 GCGRP47871 477 aa6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 CDCA8Q53HL2 280 aa6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 NOP9Q86U38 636 aaKnown RBP6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 FAM9AQ8IZU1 332 aaPredicted RBP6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 SPIRE2Q8WWL2 714 aa6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 WNT2BQ93097 391 aa6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 UCN2Q96RP3 112 aa6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.15□□□□□ -1.42
GAPLINC-201ENST00000578664 GOLGA8CPA6NN73 597 aa6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 USP17L8P0C7I0 530 aa6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 SSFA2P28290 1259 aa6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 GIMAP6Q6P9H5 292 aa6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 RSBN1LQ6PCB5 846 aaPredicted RBP6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 NPAS4Q8IUM7 802 aa6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 PSMD1Q99460 953 aa6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 ABCC9O60706 1549 aa6.14□□□□□ -1.43
GAPLINC-201ENST00000578664 BCAMP50895 628 aa6.13□□□□□ -1.43
GAPLINC-201ENST00000578664 THSD4Q6ZMP0 1018 aa6.13□□□□□ -1.43
GAPLINC-201ENST00000578664 SPNS2Q8IVW8 549 aa6.13□□□□□ -1.43
GAPLINC-201ENST00000578664 RDH13Q8NBN7 331 aa6.13□□□□□ -1.43
GAPLINC-201ENST00000578664 TSR3Q9UJK0 312 aaKnown RBP6.13□□□□□ -1.43
GAPLINC-201ENST00000578664 ANKRD33BA6NCL7 494 aa6.12□□□□□ -1.43
GAPLINC-201ENST00000578664 KDM4AO75164 1064 aa6.12□□□□□ -1.43
GAPLINC-201ENST00000578664 SLC4A3P48751 1232 aa6.12□□□□□ -1.43
GAPLINC-201ENST00000578664 VAC14Q08AM6 782 aa6.12□□□□□ -1.43
GAPLINC-201ENST00000578664 KANK4Q5T7N3 995 aaPredicted RBP6.12□□□□□ -1.43
GAPLINC-201ENST00000578664 PRPF38BQ5VTL8 546 aaKnown RBP6.12□□□□□ -1.43
GAPLINC-201ENST00000578664 BCL11AQ9H165 835 aa6.12□□□□□ -1.43
GAPLINC-201ENST00000578664 ATP9BO43861 1147 aa6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 CFHP08603 1231 aa6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 RTL5Q5HYW3 569 aaPredicted RBP6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 TMEM164Q5U3C3 297 aa6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 NOL8Q76FK4 1167 aaKnown RBP6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 DPH6Q7L8W6 267 aa6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 PRR7Q8TB68 274 aa6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 KCTD12Q96CX2 325 aaKnown RBP6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 HPS5Q9UPZ3 1129 aa6.11□□□□□ -1.43
GAPLINC-201ENST00000578664 PLEKHD1A6NEE1 506 aa6.1□□□□□ -1.43
GAPLINC-201ENST00000578664 ACTN4O43707 911 aaKnown RBP6.1□□□□□ -1.43
GAPLINC-201ENST00000578664 GPR37L1O60883 481 aa6.1□□□□□ -1.43
GAPLINC-201ENST00000578664 USP46P62068 366 aa6.1□□□□□ -1.43
GAPLINC-201ENST00000578664 QPCTQ16769 361 aa6.1□□□□□ -1.43
GAPLINC-201ENST00000578664 HOXA2O43364 376 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 MARCH6O60337 910 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 RNF40O75150 1001 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 CLSTN1O94985 981 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 RECKO95980 971 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 APLP1P51693 650 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 PPP4CP60510 307 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 SEMA3FQ13275 785 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 COL19A1Q14993 1142 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 TBC1D9Q6ZT07 1266 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 CUEDC1Q9NWM3 386 aaPredicted RBP6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 WBP1LQ9NX94 342 aa6.09□□□□□ -1.43
GAPLINC-201ENST00000578664 MOXD2PA6NHM9 499 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 NUTM2BA6NNL0 878 aaPredicted RBP6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 NUTM2EB1AL46 878 aaPredicted RBP6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 FUT2Q10981 343 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 KMT5BQ4FZB7 885 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 NUTM2DQ5VT03 806 aaPredicted RBP6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 NYAP1Q6ZVC0 841 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 FBXO33Q7Z6M2 555 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 NUTM1Q86Y26 1132 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 NUTM2AQ8IVF1 878 aaPredicted RBP6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 ZNF592Q92610 1267 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 PRR14Q9BWN1 585 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 TRIM34Q9BYJ4 488 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 ZMIZ1Q9ULJ6 1067 aa6.08□□□□□ -1.44
GAPLINC-201ENST00000578664 TLDC2A0PJX2 215 aa6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 LZTS3O60299 673 aaPredicted RBP6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 NDUFV2P19404 249 aa6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 ERCC5P28715 1186 aaPredicted RBP6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 ATP6V1AP38606 617 aa6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 NOVA2Q9UNW9 492 aaKnown RBP6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.07□□□□□ -1.44
GAPLINC-201ENST00000578664 LOC102724159A0A0B4J2E5 919 aa6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 PWP2Q15269 919 aaKnown RBP6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 CSPP1Q1MSJ5 1256 aa6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 MORN1Q5T089 497 aa6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 ZNF662Q6ZS27 426 aa6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 TICAM2Q86XR7 235 aa6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 NFATC2IPQ8NCF5 419 aa6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 STK32AQ8WU08 396 aa6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 CLP1Q92989 425 aaKnown RBP6.06□□□□□ -1.44
GAPLINC-201ENST00000578664 PCDHB15Q9Y5E8 787 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms