RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 YTHDC2Q9H6S0 1430 aaKnown RBP20.23■□□□□ 0.83
SREBF1-217ENST00000577897 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
SREBF1-217ENST00000577897 APBA3O96018 575 aa20.22■□□□□ 0.83
SREBF1-217ENST00000577897 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
SREBF1-217ENST00000577897 SAFB2Q14151 953 aaKnown RBP eCLIP20.21■□□□□ 0.83
SREBF1-217ENST00000577897 UTRNP46939 3433 aa20.2■□□□□ 0.82
SREBF1-217ENST00000577897 NINLQ9Y2I6 1382 aa20.2■□□□□ 0.82
SREBF1-217ENST00000577897 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
SREBF1-217ENST00000577897 RREB1Q92766 1687 aa20.19■□□□□ 0.82
SREBF1-217ENST00000577897 PARD3Q8TEW0 1356 aa20.19■□□□□ 0.82
SREBF1-217ENST00000577897 ZNF784Q8NCA9 323 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-217ENST00000577897 NUP188Q5SRE5 1749 aa20.18■□□□□ 0.82
SREBF1-217ENST00000577897 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-217ENST00000577897 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
SREBF1-217ENST00000577897 NBPF14Q5TI25 921 aa20.17■□□□□ 0.82
SREBF1-217ENST00000577897 ANKRD30BQ9BXX2 1392 aa20.17■□□□□ 0.82
SREBF1-217ENST00000577897 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
SREBF1-217ENST00000577897 CEP350Q5VT06 3117 aa20.16■□□□□ 0.82
SREBF1-217ENST00000577897 SPON1Q9HCB6 807 aa20.16■□□□□ 0.82
SREBF1-217ENST00000577897 PRDM11Q9NQV5 511 aa20.16■□□□□ 0.82
SREBF1-217ENST00000577897 ALS2Q96Q42 1657 aa20.15■□□□□ 0.82
SREBF1-217ENST00000577897 CAMTA1Q9Y6Y1 1673 aa20.14■□□□□ 0.81
SREBF1-217ENST00000577897 STRN4Q9NRL3 753 aa20.14■□□□□ 0.81
SREBF1-217ENST00000577897 GPRASP1Q5JY77 1395 aa20.13■□□□□ 0.81
SREBF1-217ENST00000577897 SPATA31A1Q5TZJ5 1347 aa20.13■□□□□ 0.81
SREBF1-217ENST00000577897 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
SREBF1-217ENST00000577897 PRAM1Q96QH2 718 aa20.13■□□□□ 0.81
SREBF1-217ENST00000577897 SPATA31E1Q6ZUB1 1445 aa20.12■□□□□ 0.81
SREBF1-217ENST00000577897 ANKARQ7Z5J8 1434 aa20.12■□□□□ 0.81
SREBF1-217ENST00000577897 KCNQ2O43526 872 aa20.12■□□□□ 0.81
SREBF1-217ENST00000577897 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
SREBF1-217ENST00000577897 C1QTNF8P60827 252 aa20.11■□□□□ 0.81
SREBF1-217ENST00000577897 CRYBG1Q9Y4K1 1723 aa20.1■□□□□ 0.81
SREBF1-217ENST00000577897 PAK3O75914 559 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-217ENST00000577897 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
SREBF1-217ENST00000577897 CHRNA2Q15822 529 aa20.09■□□□□ 0.81
SREBF1-217ENST00000577897 POGKQ9P215 609 aa20.09■□□□□ 0.81
SREBF1-217ENST00000577897 KIAA0232Q92628 1395 aa20.08■□□□□ 0.8
SREBF1-217ENST00000577897 CFAP70Q5T0N1 1121 aa20.07■□□□□ 0.8
SREBF1-217ENST00000577897 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-217ENST00000577897 CHD4Q14839 1912 aa20.06■□□□□ 0.8
SREBF1-217ENST00000577897 C14orf93Q9H972 538 aaKnown RBP20.06■□□□□ 0.8
SREBF1-217ENST00000577897 TIMELESSQ9UNS1 1208 aa20.06■□□□□ 0.8
SREBF1-217ENST00000577897 NGDNQ8NEJ9 315 aaKnown RBP20.04■□□□□ 0.8
SREBF1-217ENST00000577897 ZC3H6P61129 1189 aaKnown RBP20.03■□□□□ 0.8
SREBF1-217ENST00000577897 NRKQ7Z2Y5 1582 aa20.03■□□□□ 0.8
SREBF1-217ENST00000577897 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
SREBF1-217ENST00000577897 PHRF1Q9P1Y6 1649 aaKnown RBP20.02■□□□□ 0.8
SREBF1-217ENST00000577897 EVA1CP58658 441 aa20.02■□□□□ 0.8
SREBF1-217ENST00000577897 MINK1Q8N4C8 1332 aaPredicted RBP20.02■□□□□ 0.79
SREBF1-217ENST00000577897 DLC1Q96QB1 1528 aa20.01■□□□□ 0.79
SREBF1-217ENST00000577897 TULP4Q9NRJ4 1543 aa20.01■□□□□ 0.79
SREBF1-217ENST00000577897 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
SREBF1-217ENST00000577897 BARGINQ6ZT62 677 aa20■□□□□ 0.79
SREBF1-217ENST00000577897 SSH2Q76I76 1423 aa20■□□□□ 0.79
SREBF1-217ENST00000577897 NUTM2GQ5VZR2 741 aa19.99■□□□□ 0.79
SREBF1-217ENST00000577897 LARP1Q6PKG0 1096 aaKnown RBP19.97■□□□□ 0.79
SREBF1-217ENST00000577897 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
SREBF1-217ENST00000577897 MYOM1P52179 1685 aa19.97■□□□□ 0.79
SREBF1-217ENST00000577897 ZBTB7AO95365 584 aa19.96■□□□□ 0.79
SREBF1-217ENST00000577897 TCP11L2Q8N4U5 519 aa19.96■□□□□ 0.79
SREBF1-217ENST00000577897 ANO8Q9HCE9 1232 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-217ENST00000577897 CASZ1Q86V15 1759 aa19.95■□□□□ 0.78
SREBF1-217ENST00000577897 WASLO00401 505 aaPredicted RBP19.94■□□□□ 0.78
SREBF1-217ENST00000577897 PDGFDQ9GZP0 370 aaPredicted RBP19.94■□□□□ 0.78
SREBF1-217ENST00000577897 ATP7BP35670 1465 aa19.92■□□□□ 0.78
SREBF1-217ENST00000577897 ZNF316A6NFI3 1004 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-217ENST00000577897 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
SREBF1-217ENST00000577897 PARP4Q9UKK3 1724 aaKnown RBP19.91■□□□□ 0.78
SREBF1-217ENST00000577897 RGPD3A6NKT7 1758 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-217ENST00000577897 RGPD4Q7Z3J3 1758 aa19.91■□□□□ 0.78
SREBF1-217ENST00000577897 BCL11BQ9C0K0 894 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-217ENST00000577897 ATF5Q9Y2D1 282 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-217ENST00000577897 OVOS2A0A0G2JMS6 1433 aa19.91■□□□□ 0.78
SREBF1-217ENST00000577897 OVOS2A0A0J9YW53 1432 aa19.91■□□□□ 0.78
SREBF1-217ENST00000577897 OVOS2Q6IE36 1432 aa19.91■□□□□ 0.78
SREBF1-217ENST00000577897 ITSN1Q15811 1721 aa19.9■□□□□ 0.78
SREBF1-217ENST00000577897 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
SREBF1-217ENST00000577897 FHDC1Q9C0D6 1143 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-217ENST00000577897 LMO7Q8WWI1 1683 aa19.88■□□□□ 0.77
SREBF1-217ENST00000577897 C11orf95C9JLR9 678 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-217ENST00000577897 PTGER2P43116 358 aa19.88■□□□□ 0.77
SREBF1-217ENST00000577897 THRAP3Q9Y2W1 955 aaKnown RBP19.88■□□□□ 0.77
SREBF1-217ENST00000577897 PLSCR1O15162 318 aa19.87■□□□□ 0.77
SREBF1-217ENST00000577897 GIGYF1O75420 1035 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-217ENST00000577897 SYT17Q9BSW7 474 aa19.87■□□□□ 0.77
SREBF1-217ENST00000577897 PEAK1Q9H792 1746 aa19.87■□□□□ 0.77
SREBF1-217ENST00000577897 NUDT16Q96DE0 195 aaKnown RBP19.86■□□□□ 0.77
SREBF1-217ENST00000577897 TONSLQ96HA7 1378 aa19.85■□□□□ 0.77
SREBF1-217ENST00000577897 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
SREBF1-217ENST00000577897 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
SREBF1-217ENST00000577897 PTF1AQ7RTS3 328 aa19.85■□□□□ 0.77
SREBF1-217ENST00000577897 SBF2Q86WG5 1849 aa19.85■□□□□ 0.77
SREBF1-217ENST00000577897 LRRC37A3O60309 1634 aa19.84■□□□□ 0.77
SREBF1-217ENST00000577897 GOLGB1Q14789 3259 aaKnown RBP19.84■□□□□ 0.77
SREBF1-217ENST00000577897 COL5A2P05997 1499 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-217ENST00000577897 ABTB2Q8N961 1025 aa19.83■□□□□ 0.77
SREBF1-217ENST00000577897 STK32BQ9NY57 414 aa19.83■□□□□ 0.77
SREBF1-217ENST00000577897 CPDO75976 1380 aa19.83■□□□□ 0.76
SREBF1-217ENST00000577897 DDB1Q16531 1140 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms