RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PRDM11Q9NQV5 511 aa19.71■□□□□ 0.75
COPS3-214ENST00000577246 TRPM3Q9HCF6 1732 aaPredicted RBP19.71■□□□□ 0.75
COPS3-214ENST00000577246 HIRIP3Q9BW71 556 aaPredicted RBP19.7■□□□□ 0.74
COPS3-214ENST00000577246 TRAK1Q9UPV9 953 aa19.7■□□□□ 0.74
COPS3-214ENST00000577246 RGPD1P0DJD0 1748 aa19.7■□□□□ 0.74
COPS3-214ENST00000577246 WASLO00401 505 aaPredicted RBP19.69■□□□□ 0.74
COPS3-214ENST00000577246 PAK3O75914 559 aaPredicted RBP19.69■□□□□ 0.74
COPS3-214ENST00000577246 MINK1Q8N4C8 1332 aaPredicted RBP19.69■□□□□ 0.74
COPS3-214ENST00000577246 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
COPS3-214ENST00000577246 ADGRB1O14514 1584 aa19.68■□□□□ 0.74
COPS3-214ENST00000577246 R3HDM1Q15032 1099 aaKnown RBP19.67■□□□□ 0.74
COPS3-214ENST00000577246 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
COPS3-214ENST00000577246 FAM196AQ6ZSG2 479 aa19.66■□□□□ 0.74
COPS3-214ENST00000577246 PRR36Q9H6K5 1346 aa19.66■□□□□ 0.74
COPS3-214ENST00000577246 PARD3Q8TEW0 1356 aa19.65■□□□□ 0.74
COPS3-214ENST00000577246 THSD7AQ9UPZ6 1657 aa19.65■□□□□ 0.74
COPS3-214ENST00000577246 FAM182BQ5T319 152 aa19.64■□□□□ 0.73
COPS3-214ENST00000577246 SPATA31A1Q5TZJ5 1347 aa19.64■□□□□ 0.73
COPS3-214ENST00000577246 ATP7BP35670 1465 aa19.62■□□□□ 0.73
COPS3-214ENST00000577246 KIAA0232Q92628 1395 aa19.62■□□□□ 0.73
COPS3-214ENST00000577246 EZH2Q15910 746 aaKnown RBP19.61■□□□□ 0.73
COPS3-214ENST00000577246 TRIM37O94972 964 aa19.6■□□□□ 0.73
COPS3-214ENST00000577246 DCAF11Q8TEB1 546 aa19.6■□□□□ 0.73
COPS3-214ENST00000577246 STRN4Q9NRL3 753 aa19.6■□□□□ 0.73
COPS3-214ENST00000577246 KDM2AQ9Y2K7 1162 aa19.6■□□□□ 0.73
COPS3-214ENST00000577246 NUDT16Q96DE0 195 aaKnown RBP19.59■□□□□ 0.73
COPS3-214ENST00000577246 CAMKK2Q96RR4 588 aa19.59■□□□□ 0.73
COPS3-214ENST00000577246 TNS1Q9HBL0 1735 aaKnown RBP19.59■□□□□ 0.73
COPS3-214ENST00000577246 CRYBG1Q9Y4K1 1723 aa19.59■□□□□ 0.73
COPS3-214ENST00000577246 APBA3O96018 575 aa19.58■□□□□ 0.72
COPS3-214ENST00000577246 EVA1CP58658 441 aa19.58■□□□□ 0.72
COPS3-214ENST00000577246 PDE3BQ13370 1112 aa19.58■□□□□ 0.72
COPS3-214ENST00000577246 CHRNA2Q15822 529 aa19.58■□□□□ 0.72
COPS3-214ENST00000577246 ITSN1Q15811 1721 aa19.57■□□□□ 0.72
COPS3-214ENST00000577246 BARGINQ6ZT62 677 aa19.57■□□□□ 0.72
COPS3-214ENST00000577246 ZC3H6P61129 1189 aaKnown RBP19.56■□□□□ 0.72
COPS3-214ENST00000577246 NBPF8Q3BBV2 869 aa19.56■□□□□ 0.72
COPS3-214ENST00000577246 NBPF14Q5TI25 921 aa19.56■□□□□ 0.72
COPS3-214ENST00000577246 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
COPS3-214ENST00000577246 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
COPS3-214ENST00000577246 SSH2Q76I76 1423 aa19.54■□□□□ 0.72
COPS3-214ENST00000577246 C11orf95C9JLR9 678 aaPredicted RBP19.54■□□□□ 0.72
COPS3-214ENST00000577246 POLR3AO14802 1390 aaPredicted RBP19.54■□□□□ 0.72
COPS3-214ENST00000577246 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
COPS3-214ENST00000577246 PHRF1Q9P1Y6 1649 aaKnown RBP19.53■□□□□ 0.72
COPS3-214ENST00000577246 TCP11L2Q8N4U5 519 aa19.52■□□□□ 0.72
COPS3-214ENST00000577246 CDK19Q9BWU1 502 aa19.52■□□□□ 0.72
COPS3-214ENST00000577246 THRAP3Q9Y2W1 955 aaKnown RBP19.52■□□□□ 0.72
COPS3-214ENST00000577246 ACEP12821 1306 aa19.51■□□□□ 0.71
COPS3-214ENST00000577246 NUTM2GQ5VZR2 741 aa19.51■□□□□ 0.71
COPS3-214ENST00000577246 CPDO75976 1380 aa19.51■□□□□ 0.71
COPS3-214ENST00000577246 ABTB2Q8N961 1025 aa19.5■□□□□ 0.71
COPS3-214ENST00000577246 ARHGEF28Q8N1W1 1705 aaKnown RBP19.49■□□□□ 0.71
COPS3-214ENST00000577246 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
COPS3-214ENST00000577246 DCAF8L1A6NGE4 600 aa19.49■□□□□ 0.71
COPS3-214ENST00000577246 LARP1Q6PKG0 1096 aaKnown RBP19.48■□□□□ 0.71
COPS3-214ENST00000577246 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
COPS3-214ENST00000577246 PPP1R1BQ9UD71 204 aaPredicted RBP19.47■□□□□ 0.71
COPS3-214ENST00000577246 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
COPS3-214ENST00000577246 USP19O94966 1318 aa19.47■□□□□ 0.71
COPS3-214ENST00000577246 YY1P25490 414 aa19.46■□□□□ 0.71
COPS3-214ENST00000577246 SPON1Q9HCB6 807 aa19.46■□□□□ 0.71
COPS3-214ENST00000577246 RREB1Q92766 1687 aa19.46■□□□□ 0.71
COPS3-214ENST00000577246 CAMTA1Q9Y6Y1 1673 aa19.46■□□□□ 0.71
COPS3-214ENST00000577246 BRD4O60885 1362 aaPredicted RBP19.45■□□□□ 0.7
COPS3-214ENST00000577246 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
COPS3-214ENST00000577246 GCP02774 474 aa19.44■□□□□ 0.7
COPS3-214ENST00000577246 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
COPS3-214ENST00000577246 LMO7Q8WWI1 1683 aa19.43■□□□□ 0.7
COPS3-214ENST00000577246 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
COPS3-214ENST00000577246 OVOS2A0A0J9YW53 1432 aa19.42■□□□□ 0.7
COPS3-214ENST00000577246 OVOS2Q6IE36 1432 aa19.42■□□□□ 0.7
COPS3-214ENST00000577246 NUP188Q5SRE5 1749 aa19.42■□□□□ 0.7
COPS3-214ENST00000577246 KCNQ2O43526 872 aa19.42■□□□□ 0.7
COPS3-214ENST00000577246 CRB1P82279 1406 aa19.42■□□□□ 0.7
COPS3-214ENST00000577246 COL5A2P05997 1499 aaPredicted RBP19.41■□□□□ 0.7
COPS3-214ENST00000577246 SRPK2P78362 688 aaKnown RBP19.41■□□□□ 0.7
COPS3-214ENST00000577246 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
COPS3-214ENST00000577246 PARP4Q9UKK3 1724 aaKnown RBP19.39■□□□□ 0.69
COPS3-214ENST00000577246 PLSCR1O15162 318 aa19.38■□□□□ 0.69
COPS3-214ENST00000577246 KIAA1210Q9ULL0 1709 aa19.37■□□□□ 0.69
COPS3-214ENST00000577246 AATKQ6ZMQ8 1374 aa19.37■□□□□ 0.69
COPS3-214ENST00000577246 DDB1Q16531 1140 aa19.37■□□□□ 0.69
COPS3-214ENST00000577246 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
COPS3-214ENST00000577246 ZBTB7CA1YPR0 619 aa19.35■□□□□ 0.69
COPS3-214ENST00000577246 NLRP6P59044 892 aa19.35■□□□□ 0.69
COPS3-214ENST00000577246 TOM1L2Q6ZVM7 507 aa19.35■□□□□ 0.69
COPS3-214ENST00000577246 CDCA7Q9BWT1 371 aaPredicted RBP19.35■□□□□ 0.69
COPS3-214ENST00000577246 RGPD3A6NKT7 1758 aaPredicted RBP19.34■□□□□ 0.69
COPS3-214ENST00000577246 RGPD4Q7Z3J3 1758 aa19.34■□□□□ 0.69
COPS3-214ENST00000577246 BCL11BQ9C0K0 894 aaPredicted RBP19.34■□□□□ 0.69
COPS3-214ENST00000577246 CABP2Q9NPB3 220 aa19.33■□□□□ 0.68
COPS3-214ENST00000577246 USP6P35125 1406 aa19.33■□□□□ 0.68
COPS3-214ENST00000577246 SLIT3O75094 1523 aa19.31■□□□□ 0.68
COPS3-214ENST00000577246 PEAK1Q9H792 1746 aa19.31■□□□□ 0.68
COPS3-214ENST00000577246 WDR17Q8IZU2 1322 aa19.3■□□□□ 0.68
COPS3-214ENST00000577246 LRRC37A3O60309 1634 aa19.3■□□□□ 0.68
COPS3-214ENST00000577246 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
COPS3-214ENST00000577246 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
COPS3-214ENST00000577246 BCL9O00512 1426 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms