RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
CALCOCO2-226ENST00000575461 BHMG1C9JSJ3 638 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO2-226ENST00000575461 PIK3CDO00329 1044 aa13.55□□□□□ -0.24
CALCOCO2-226ENST00000575461 SKIP12755 728 aa13.55□□□□□ -0.24
CALCOCO2-226ENST00000575461 LRCH3Q96II8 777 aa13.55□□□□□ -0.24
CALCOCO2-226ENST00000575461 NOVA2Q9UNW9 492 aaKnown RBP13.55□□□□□ -0.24
CALCOCO2-226ENST00000575461 F12P00748 615 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO2-226ENST00000575461 MCCD1P59942 119 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO2-226ENST00000575461 TMEM164Q5U3C3 297 aa13.54□□□□□ -0.24
CALCOCO2-226ENST00000575461 ZMIZ1Q9ULJ6 1067 aa13.54□□□□□ -0.24
CALCOCO2-226ENST00000575461 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
CALCOCO2-226ENST00000575461 USP17L5A8MUK1 530 aa13.53□□□□□ -0.24
CALCOCO2-226ENST00000575461 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
CALCOCO2-226ENST00000575461 FAM196BA6NMK8 535 aa13.52□□□□□ -0.25
CALCOCO2-226ENST00000575461 PTPRNQ16849 979 aa13.52□□□□□ -0.25
CALCOCO2-226ENST00000575461 BRICD5Q6PL45 260 aa13.52□□□□□ -0.25
CALCOCO2-226ENST00000575461 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO2-226ENST00000575461 BLOC1S3Q6QNY0 202 aa13.51□□□□□ -0.25
CALCOCO2-226ENST00000575461 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
CALCOCO2-226ENST00000575461 STK32AQ8WU08 396 aa13.51□□□□□ -0.25
CALCOCO2-226ENST00000575461 GPSM3Q9Y4H4 160 aa13.51□□□□□ -0.25
CALCOCO2-226ENST00000575461 TK2O00142 265 aa13.5□□□□□ -0.25
CALCOCO2-226ENST00000575461 LZTS3O60299 673 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO2-226ENST00000575461 FMNL1O95466 1100 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO2-226ENST00000575461 JUNDP17535 347 aa13.49□□□□□ -0.25
CALCOCO2-226ENST00000575461 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
CALCOCO2-226ENST00000575461 TXNDC2Q86VQ3 553 aa13.49□□□□□ -0.25
CALCOCO2-226ENST00000575461 ARMC2Q8NEN0 867 aa13.49□□□□□ -0.25
CALCOCO2-226ENST00000575461 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
CALCOCO2-226ENST00000575461 GPKOWQ92917 476 aaPredicted RBP eCLIP13.48□□□□□ -0.25
CALCOCO2-226ENST00000575461 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L15C9J2P7 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L10C9JJH3 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L13C9JLJ4 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L11C9JVI0 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L21D6R901 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L18D6R9N7 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L22D6RA61 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L17D6RBQ6 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L19D6RCP7 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L20D6RJB6 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 ATP5J2-PTCD1G3V325 749 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 NR1I2O75469 434 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 ARID4AP29374 1257 aaPredicted RBP13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 PTK2Q05397 1052 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 USP17L24Q0WX57 530 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 FAM174AQ8TBP5 190 aa13.47□□□□□ -0.25
CALCOCO2-226ENST00000575461 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
CALCOCO2-226ENST00000575461 CEP126Q9P2H0 1117 aa13.46□□□□□ -0.25
CALCOCO2-226ENST00000575461 CTHP32929 405 aa13.45□□□□□ -0.26
CALCOCO2-226ENST00000575461 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
CALCOCO2-226ENST00000575461 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
CALCOCO2-226ENST00000575461 THAP11Q96EK4 314 aa13.45□□□□□ -0.26
CALCOCO2-226ENST00000575461 SSFA2P28290 1259 aa13.44□□□□□ -0.26
CALCOCO2-226ENST00000575461 DEPDC4Q8N2C3 294 aa13.44□□□□□ -0.26
CALCOCO2-226ENST00000575461 FAM200AQ8TCP9 573 aa13.44□□□□□ -0.26
CALCOCO2-226ENST00000575461 CDCA7Q9BWT1 371 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO2-226ENST00000575461 RASA1P20936 1047 aa13.43□□□□□ -0.26
CALCOCO2-226ENST00000575461 PTK7Q13308 1070 aa13.43□□□□□ -0.26
CALCOCO2-226ENST00000575461 CRTC2Q53ET0 693 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO2-226ENST00000575461 PHLDB3Q6NSJ2 640 aa13.43□□□□□ -0.26
CALCOCO2-226ENST00000575461 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
CALCOCO2-226ENST00000575461 CLP1Q92989 425 aaKnown RBP13.43□□□□□ -0.26
CALCOCO2-226ENST00000575461 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
CALCOCO2-226ENST00000575461 ERCC3P19447 782 aa13.42□□□□□ -0.26
CALCOCO2-226ENST00000575461 PPP4CP60510 307 aa13.42□□□□□ -0.26
CALCOCO2-226ENST00000575461 CCNYL3P0C7X3 344 aa13.41□□□□□ -0.26
CALCOCO2-226ENST00000575461 NCOA4Q13772 614 aa13.41□□□□□ -0.26
CALCOCO2-226ENST00000575461 MAP7D1Q3KQU3 841 aa13.41□□□□□ -0.26
CALCOCO2-226ENST00000575461 NBPF14Q5TI25 921 aa13.41□□□□□ -0.26
CALCOCO2-226ENST00000575461 PCDHB3Q9Y5E6 796 aa13.41□□□□□ -0.26
CALCOCO2-226ENST00000575461 MSS51Q4VC12 460 aa13.4□□□□□ -0.26
CALCOCO2-226ENST00000575461 PHTF2Q8N3S3 785 aa13.4□□□□□ -0.26
CALCOCO2-226ENST00000575461 PLPP7Q8NBV4 271 aa13.4□□□□□ -0.26
CALCOCO2-226ENST00000575461 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
CALCOCO2-226ENST00000575461 EVA1BQ9NVM1 165 aa13.4□□□□□ -0.26
CALCOCO2-226ENST00000575461 PCDHB9Q9Y5E1 797 aa13.4□□□□□ -0.26
CALCOCO2-226ENST00000575461 ANKMY2Q8IV38 441 aa13.39□□□□□ -0.27
CALCOCO2-226ENST00000575461 KCNH2Q12809 1159 aa13.38□□□□□ -0.27
CALCOCO2-226ENST00000575461 EML3Q32P44 896 aa13.38□□□□□ -0.27
CALCOCO2-226ENST00000575461 CHIC2Q9UKJ5 165 aa13.38□□□□□ -0.27
CALCOCO2-226ENST00000575461 APLP1P51693 650 aa13.37□□□□□ -0.27
CALCOCO2-226ENST00000575461 EMP3P54852 163 aa13.37□□□□□ -0.27
CALCOCO2-226ENST00000575461 FAM69CQ0P6D2 419 aa13.37□□□□□ -0.27
CALCOCO2-226ENST00000575461 SWI5Q1ZZU3 235 aa13.37□□□□□ -0.27
CALCOCO2-226ENST00000575461 TRIM50Q86XT4 487 aa13.37□□□□□ -0.27
CALCOCO2-226ENST00000575461 SOWAHBA6NEL2 793 aa13.36□□□□□ -0.27
CALCOCO2-226ENST00000575461 DXOO77932 396 aaKnown RBP13.36□□□□□ -0.27
CALCOCO2-226ENST00000575461 TSR3Q9UJK0 312 aaKnown RBP13.36□□□□□ -0.27
CALCOCO2-226ENST00000575461 HPS5Q9UPZ3 1129 aa13.36□□□□□ -0.27
CALCOCO2-226ENST00000575461 RBM47A0AV96 593 aaKnown RBP13.35□□□□□ -0.27
CALCOCO2-226ENST00000575461 GOLGA8CPA6NN73 597 aa13.35□□□□□ -0.27
CALCOCO2-226ENST00000575461 NUDT12Q9BQG2 462 aa13.35□□□□□ -0.27
CALCOCO2-226ENST00000575461 ATP2B4P23634 1241 aa13.34□□□□□ -0.27
CALCOCO2-226ENST00000575461 ATP1A2P50993 1020 aa13.34□□□□□ -0.27
CALCOCO2-226ENST00000575461 ADGRD1Q6QNK2 874 aa13.34□□□□□ -0.27
CALCOCO2-226ENST00000575461 SOWAHDA6NJG2 315 aa13.33□□□□□ -0.28
CALCOCO2-226ENST00000575461 MMP16P51512 607 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms