RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
SMG6-218ENST00000575454 BRWD3Q6RI45 1802 aa13.26□□□□□ -0.29
SMG6-218ENST00000575454 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
SMG6-218ENST00000575454 DLC1Q96QB1 1528 aa13.26□□□□□ -0.29
SMG6-218ENST00000575454 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
SMG6-218ENST00000575454 APBA3O96018 575 aa13.25□□□□□ -0.29
SMG6-218ENST00000575454 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
SMG6-218ENST00000575454 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
SMG6-218ENST00000575454 NBPF14Q5TI25 921 aa13.25□□□□□ -0.29
SMG6-218ENST00000575454 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
SMG6-218ENST00000575454 TRIM37O94972 964 aa13.24□□□□□ -0.29
SMG6-218ENST00000575454 EVA1CP58658 441 aa13.24□□□□□ -0.29
SMG6-218ENST00000575454 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
SMG6-218ENST00000575454 STRN4Q9NRL3 753 aa13.24□□□□□ -0.29
SMG6-218ENST00000575454 NWD2Q9ULI1 1742 aa13.24□□□□□ -0.29
SMG6-218ENST00000575454 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
SMG6-218ENST00000575454 DCAF8L1A6NGE4 600 aa13.23□□□□□ -0.29
SMG6-218ENST00000575454 C11orf95C9JLR9 678 aaPredicted RBP13.23□□□□□ -0.29
SMG6-218ENST00000575454 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
SMG6-218ENST00000575454 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
SMG6-218ENST00000575454 TULP4Q9NRJ4 1543 aa13.2□□□□□ -0.3
SMG6-218ENST00000575454 YY1P25490 414 aa13.2□□□□□ -0.3
SMG6-218ENST00000575454 ZC3H6P61129 1189 aaKnown RBP13.2□□□□□ -0.3
SMG6-218ENST00000575454 TCP11L2Q8N4U5 519 aa13.2□□□□□ -0.3
SMG6-218ENST00000575454 DCAF11Q8TEB1 546 aa13.2□□□□□ -0.3
SMG6-218ENST00000575454 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
SMG6-218ENST00000575454 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
SMG6-218ENST00000575454 THRAP3Q9Y2W1 955 aaKnown RBP13.2□□□□□ -0.3
SMG6-218ENST00000575454 PPP1R1BQ9UD71 204 aaPredicted RBP13.19□□□□□ -0.3
SMG6-218ENST00000575454 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
SMG6-218ENST00000575454 COL14A1Q05707 1796 aaKnown RBP13.19□□□□□ -0.3
SMG6-218ENST00000575454 ADGRB2O60241 1585 aa13.19□□□□□ -0.3
SMG6-218ENST00000575454 PLCH1Q4KWH8 1693 aa13.18□□□□□ -0.3
SMG6-218ENST00000575454 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
SMG6-218ENST00000575454 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
SMG6-218ENST00000575454 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
SMG6-218ENST00000575454 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
SMG6-218ENST00000575454 ATP7BP35670 1465 aa13.16□□□□□ -0.3
SMG6-218ENST00000575454 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
SMG6-218ENST00000575454 NUTM2GQ5VZR2 741 aa13.16□□□□□ -0.3
SMG6-218ENST00000575454 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
SMG6-218ENST00000575454 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
SMG6-218ENST00000575454 SSH2Q76I76 1423 aa13.15□□□□□ -0.3
SMG6-218ENST00000575454 KCNQ2O43526 872 aa13.15□□□□□ -0.3
SMG6-218ENST00000575454 NLRP13Q86W25 1043 aa13.15□□□□□ -0.3
SMG6-218ENST00000575454 POLR3AO14802 1390 aaPredicted RBP13.15□□□□□ -0.3
SMG6-218ENST00000575454 CPDO75976 1380 aa13.15□□□□□ -0.3
SMG6-218ENST00000575454 ACEP12821 1306 aa13.14□□□□□ -0.31
SMG6-218ENST00000575454 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
SMG6-218ENST00000575454 UTRNP46939 3433 aa13.13□□□□□ -0.31
SMG6-218ENST00000575454 NINLQ9Y2I6 1382 aa13.13□□□□□ -0.31
SMG6-218ENST00000575454 GCP02774 474 aa13.13□□□□□ -0.31
SMG6-218ENST00000575454 CEP350Q5VT06 3117 aa13.13□□□□□ -0.31
SMG6-218ENST00000575454 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
SMG6-218ENST00000575454 PLSCR1O15162 318 aa13.12□□□□□ -0.31
SMG6-218ENST00000575454 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
SMG6-218ENST00000575454 USP19O94966 1318 aa13.12□□□□□ -0.31
SMG6-218ENST00000575454 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
SMG6-218ENST00000575454 TRPM3Q9HCF6 1732 aaPredicted RBP13.11□□□□□ -0.31
SMG6-218ENST00000575454 BRD4O60885 1362 aaPredicted RBP13.11□□□□□ -0.31
SMG6-218ENST00000575454 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
SMG6-218ENST00000575454 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
SMG6-218ENST00000575454 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
SMG6-218ENST00000575454 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
SMG6-218ENST00000575454 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
SMG6-218ENST00000575454 DDB1Q16531 1140 aa13.08□□□□□ -0.32
SMG6-218ENST00000575454 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
SMG6-218ENST00000575454 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
SMG6-218ENST00000575454 CRB1P82279 1406 aa13.07□□□□□ -0.32
SMG6-218ENST00000575454 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
SMG6-218ENST00000575454 NLRP6P59044 892 aa13.07□□□□□ -0.32
SMG6-218ENST00000575454 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
SMG6-218ENST00000575454 CAMTA1Q9Y6Y1 1673 aa13.06□□□□□ -0.32
SMG6-218ENST00000575454 TNS1Q9HBL0 1735 aaKnown RBP13.06□□□□□ -0.32
SMG6-218ENST00000575454 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
SMG6-218ENST00000575454 RGPD8O14715 1765 aaPredicted RBP13.05□□□□□ -0.32
SMG6-218ENST00000575454 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
SMG6-218ENST00000575454 ZBTB7CA1YPR0 619 aa13.04□□□□□ -0.32
SMG6-218ENST00000575454 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
SMG6-218ENST00000575454 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
SMG6-218ENST00000575454 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
SMG6-218ENST00000575454 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
SMG6-218ENST00000575454 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
SMG6-218ENST00000575454 BCL9O00512 1426 aa13.03□□□□□ -0.32
SMG6-218ENST00000575454 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
SMG6-218ENST00000575454 ANO8Q9HCE9 1232 aaPredicted RBP13.02□□□□□ -0.33
SMG6-218ENST00000575454 WDR17Q8IZU2 1322 aa13.02□□□□□ -0.33
SMG6-218ENST00000575454 ZBTB7AO95365 584 aa13.01□□□□□ -0.33
SMG6-218ENST00000575454 PROM2Q8N271 834 aa13.01□□□□□ -0.33
SMG6-218ENST00000575454 MARCH10Q8NA82 808 aaPredicted RBP13.01□□□□□ -0.33
SMG6-218ENST00000575454 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
SMG6-218ENST00000575454 CARD10Q9BWT7 1032 aa13.01□□□□□ -0.33
SMG6-218ENST00000575454 EXOC5O00471 708 aa13□□□□□ -0.33
SMG6-218ENST00000575454 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
SMG6-218ENST00000575454 PTGER2P43116 358 aa13□□□□□ -0.33
SMG6-218ENST00000575454 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
SMG6-218ENST00000575454 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
SMG6-218ENST00000575454 NRKQ7Z2Y5 1582 aa12.99□□□□□ -0.33
SMG6-218ENST00000575454 SLC15A2Q16348 729 aa12.99□□□□□ -0.33
SMG6-218ENST00000575454 TXNRD1Q16881 649 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms