RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
TVP23A-205ENST00000572428 CPS1P31327 1500 aa11.74□□□□□ -0.53
TVP23A-205ENST00000572428 SBNO2Q9Y2G9 1366 aa11.74□□□□□ -0.53
TVP23A-205ENST00000572428 GPATCH11Q8N954 259 aa11.74□□□□□ -0.53
TVP23A-205ENST00000572428 CHD2O14647 1828 aaKnown RBP11.74□□□□□ -0.53
TVP23A-205ENST00000572428 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
TVP23A-205ENST00000572428 THEMISQ8N1K5 641 aaPredicted RBP11.74□□□□□ -0.53
TVP23A-205ENST00000572428 XRN1Q8IZH2 1706 aaKnown RBP11.74□□□□□ -0.53
TVP23A-205ENST00000572428 PTMSP20962 102 aa11.73□□□□□ -0.53
TVP23A-205ENST00000572428 CFAP70Q5T0N1 1121 aa11.73□□□□□ -0.53
TVP23A-205ENST00000572428 TECPR2O15040 1411 aa11.73□□□□□ -0.53
TVP23A-205ENST00000572428 STAG3Q9UJ98 1225 aa11.73□□□□□ -0.53
TVP23A-205ENST00000572428 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
TVP23A-205ENST00000572428 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
TVP23A-205ENST00000572428 EIF3AQ14152 1382 aaKnown RBP11.72□□□□□ -0.53
TVP23A-205ENST00000572428 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
TVP23A-205ENST00000572428 MYOM1P52179 1685 aa11.71□□□□□ -0.53
TVP23A-205ENST00000572428 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
TVP23A-205ENST00000572428 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.54
TVP23A-205ENST00000572428 CCER2I3L3R5 266 aa11.7□□□□□ -0.54
TVP23A-205ENST00000572428 LTKP29376 864 aa11.7□□□□□ -0.54
TVP23A-205ENST00000572428 TESK2Q96S53 571 aa11.7□□□□□ -0.54
TVP23A-205ENST00000572428 STRCQ7RTU9 1775 aa11.7□□□□□ -0.54
TVP23A-205ENST00000572428 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
TVP23A-205ENST00000572428 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
TVP23A-205ENST00000572428 NWD1Q149M9 1564 aa11.69□□□□□ -0.54
TVP23A-205ENST00000572428 ANP32CO43423 234 aa11.69□□□□□ -0.54
TVP23A-205ENST00000572428 ADGRB2O60241 1585 aa11.69□□□□□ -0.54
TVP23A-205ENST00000572428 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
TVP23A-205ENST00000572428 CCDC7Q96M83 1385 aa11.69□□□□□ -0.54
TVP23A-205ENST00000572428 PIK3R4Q99570 1358 aa11.69□□□□□ -0.54
TVP23A-205ENST00000572428 HSP90AA2PQ14568 343 aaPredicted RBP11.68□□□□□ -0.54
TVP23A-205ENST00000572428 SIRT1Q96EB6 747 aa11.68□□□□□ -0.54
TVP23A-205ENST00000572428 SETQ01105 290 aaPredicted RBP11.68□□□□□ -0.54
TVP23A-205ENST00000572428 FAM135BQ49AJ0 1406 aa11.68□□□□□ -0.54
TVP23A-205ENST00000572428 ST20-MTHFSA0A0A6YYL1 179 aa11.68□□□□□ -0.54
TVP23A-205ENST00000572428 MAFGO15525 162 aa11.68□□□□□ -0.54
TVP23A-205ENST00000572428 SGSM3Q96HU1 749 aa11.68□□□□□ -0.54
TVP23A-205ENST00000572428 WASHC2AQ641Q2 1341 aa11.67□□□□□ -0.54
TVP23A-205ENST00000572428 VGLL3A8MV65 326 aa11.67□□□□□ -0.54
TVP23A-205ENST00000572428 RRP9O43818 475 aaKnown RBP11.67□□□□□ -0.54
TVP23A-205ENST00000572428 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
TVP23A-205ENST00000572428 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
TVP23A-205ENST00000572428 C11orf95C9JLR9 678 aaPredicted RBP11.66□□□□□ -0.54
TVP23A-205ENST00000572428 METP08581 1390 aa11.66□□□□□ -0.54
TVP23A-205ENST00000572428 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
TVP23A-205ENST00000572428 TXNDC2Q86VQ3 553 aa11.66□□□□□ -0.54
TVP23A-205ENST00000572428 TBX22Q9Y458 520 aa11.66□□□□□ -0.54
TVP23A-205ENST00000572428 TMEM51Q9NW97 253 aa11.65□□□□□ -0.54
TVP23A-205ENST00000572428 PTCH1Q13635 1447 aa11.65□□□□□ -0.54
TVP23A-205ENST00000572428 KIF7Q2M1P5 1343 aa11.65□□□□□ -0.54
TVP23A-205ENST00000572428 HDAC5Q9UQL6 1122 aa11.65□□□□□ -0.54
TVP23A-205ENST00000572428 TULP4Q9NRJ4 1543 aa11.65□□□□□ -0.55
TVP23A-205ENST00000572428 PTPRUQ92729 1446 aa11.64□□□□□ -0.55
TVP23A-205ENST00000572428 NEFMP07197 916 aa11.64□□□□□ -0.55
TVP23A-205ENST00000572428 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
TVP23A-205ENST00000572428 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.64□□□□□ -0.55
TVP23A-205ENST00000572428 MMP14P50281 582 aa11.64□□□□□ -0.55
TVP23A-205ENST00000572428 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
TVP23A-205ENST00000572428 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
TVP23A-205ENST00000572428 NPHP4O75161 1426 aaPredicted RBP11.63□□□□□ -0.55
TVP23A-205ENST00000572428 ANKLE2Q86XL3 938 aa11.63□□□□□ -0.55
TVP23A-205ENST00000572428 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
TVP23A-205ENST00000572428 CLGNO14967 610 aa11.63□□□□□ -0.55
TVP23A-205ENST00000572428 TMEM132EQ6IEE7 984 aa11.63□□□□□ -0.55
TVP23A-205ENST00000572428 SPRYD3Q8NCJ5 442 aa11.62□□□□□ -0.55
TVP23A-205ENST00000572428 CENPJQ9HC77 1338 aaPredicted RBP11.62□□□□□ -0.55
TVP23A-205ENST00000572428 TOPAZ1Q8N9V7 1692 aa11.62□□□□□ -0.55
TVP23A-205ENST00000572428 STRCP1A6NGW2 1772 aa11.62□□□□□ -0.55
TVP23A-205ENST00000572428 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
TVP23A-205ENST00000572428 FOXD4L6Q3SYB3 417 aaPredicted RBP11.61□□□□□ -0.55
TVP23A-205ENST00000572428 FOXD4L3Q6VB84 417 aaPredicted RBP11.61□□□□□ -0.55
TVP23A-205ENST00000572428 TMF1P82094 1093 aa11.6□□□□□ -0.55
TVP23A-205ENST00000572428 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
TVP23A-205ENST00000572428 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
TVP23A-205ENST00000572428 PHF14O94880 888 aa11.59□□□□□ -0.55
TVP23A-205ENST00000572428 NALCNQ8IZF0 1738 aa11.59□□□□□ -0.55
TVP23A-205ENST00000572428 TRAK1Q9UPV9 953 aa11.59□□□□□ -0.55
TVP23A-205ENST00000572428 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
TVP23A-205ENST00000572428 MPNDQ8N594 471 aa11.58□□□□□ -0.56
TVP23A-205ENST00000572428 FMN2Q9NZ56 1722 aa11.58□□□□□ -0.56
TVP23A-205ENST00000572428 AKAP12Q02952 1782 aa11.58□□□□□ -0.56
TVP23A-205ENST00000572428 PSEN1P49768 467 aa11.57□□□□□ -0.56
TVP23A-205ENST00000572428 SH3BP1Q9Y3L3 701 aa11.57□□□□□ -0.56
TVP23A-205ENST00000572428 ROBO2Q9HCK4 1378 aa11.57□□□□□ -0.56
TVP23A-205ENST00000572428 NKTRP30414 1462 aaKnown RBP11.57□□□□□ -0.56
TVP23A-205ENST00000572428 XIRP1Q702N8 1843 aaKnown RBP11.57□□□□□ -0.56
TVP23A-205ENST00000572428 FANCIQ9NVI1 1328 aa11.56□□□□□ -0.56
TVP23A-205ENST00000572428 CDC42BPGQ6DT37 1551 aa11.56□□□□□ -0.56
TVP23A-205ENST00000572428 IRX3P78415 501 aaPredicted RBP11.56□□□□□ -0.56
TVP23A-205ENST00000572428 CCDC82Q8N4S0 544 aa11.56□□□□□ -0.56
TVP23A-205ENST00000572428 PLEKHH1Q9ULM0 1364 aa11.56□□□□□ -0.56
TVP23A-205ENST00000572428 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
TVP23A-205ENST00000572428 MON2Q7Z3U7 1717 aa11.55□□□□□ -0.56
TVP23A-205ENST00000572428 MFAP1P55081 439 aaKnown RBP11.55□□□□□ -0.56
TVP23A-205ENST00000572428 PRAM1Q96QH2 718 aa11.55□□□□□ -0.56
TVP23A-205ENST00000572428 ANKRD26Q9UPS8 1709 aa11.54□□□□□ -0.56
TVP23A-205ENST00000572428 EVC2Q86UK5 1308 aa11.54□□□□□ -0.56
TVP23A-205ENST00000572428 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
TVP23A-205ENST00000572428 RGPD8O14715 1765 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms