RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 ADGRF5Q8IZF2 1346 aa19.81■□□□□ 0.76
CCDC40-208ENST00000572270 TMEM132EQ6IEE7 984 aa19.81■□□□□ 0.76
CCDC40-208ENST00000572270 TRPM3Q9HCF6 1732 aaPredicted RBP19.8■□□□□ 0.76
CCDC40-208ENST00000572270 YTHDC2Q9H6S0 1430 aaKnown RBP19.79■□□□□ 0.76
CCDC40-208ENST00000572270 ALS2Q96Q42 1657 aa19.79■□□□□ 0.76
CCDC40-208ENST00000572270 SPATA31A1Q5TZJ5 1347 aa19.78■□□□□ 0.76
CCDC40-208ENST00000572270 C1QTNF8P60827 252 aa19.78■□□□□ 0.76
CCDC40-208ENST00000572270 PMFBP1Q8TBY8 1022 aa19.78■□□□□ 0.76
CCDC40-208ENST00000572270 PRDM11Q9NQV5 511 aa19.78■□□□□ 0.76
CCDC40-208ENST00000572270 PDE3BQ13370 1112 aa19.77■□□□□ 0.76
CCDC40-208ENST00000572270 GPRASP1Q5JY77 1395 aa19.76■□□□□ 0.75
CCDC40-208ENST00000572270 NRKQ7Z2Y5 1582 aa19.75■□□□□ 0.75
CCDC40-208ENST00000572270 ANKRD30BQ9BXX2 1392 aa19.75■□□□□ 0.75
CCDC40-208ENST00000572270 SIRT1Q96EB6 747 aa19.75■□□□□ 0.75
CCDC40-208ENST00000572270 ANKARQ7Z5J8 1434 aa19.75■□□□□ 0.75
CCDC40-208ENST00000572270 CRYBG1Q9Y4K1 1723 aa19.74■□□□□ 0.75
CCDC40-208ENST00000572270 STRN4Q9NRL3 753 aa19.74■□□□□ 0.75
CCDC40-208ENST00000572270 PIK3C2GO75747 1445 aa19.73■□□□□ 0.75
CCDC40-208ENST00000572270 CHD4Q14839 1912 aa19.72■□□□□ 0.75
CCDC40-208ENST00000572270 RGL3Q3MIN7 710 aa19.72■□□□□ 0.75
CCDC40-208ENST00000572270 UTRNP46939 3433 aa19.72■□□□□ 0.75
CCDC40-208ENST00000572270 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
CCDC40-208ENST00000572270 USP35Q9P2H5 1018 aa19.71■□□□□ 0.75
CCDC40-208ENST00000572270 SAFB2Q14151 953 aaKnown RBP eCLIP19.7■□□□□ 0.74
CCDC40-208ENST00000572270 CASZ1Q86V15 1759 aa19.7■□□□□ 0.74
CCDC40-208ENST00000572270 MYOM1P52179 1685 aa19.69■□□□□ 0.74
CCDC40-208ENST00000572270 KIAA0232Q92628 1395 aa19.69■□□□□ 0.74
CCDC40-208ENST00000572270 PAK3O75914 559 aaPredicted RBP19.68■□□□□ 0.74
CCDC40-208ENST00000572270 BARGINQ6ZT62 677 aa19.68■□□□□ 0.74
CCDC40-208ENST00000572270 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
CCDC40-208ENST00000572270 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
CCDC40-208ENST00000572270 RGPD3A6NKT7 1758 aaPredicted RBP19.67■□□□□ 0.74
CCDC40-208ENST00000572270 RGPD4Q7Z3J3 1758 aa19.67■□□□□ 0.74
CCDC40-208ENST00000572270 CHRNA2Q15822 529 aa19.67■□□□□ 0.74
CCDC40-208ENST00000572270 PRAM1Q96QH2 718 aa19.67■□□□□ 0.74
CCDC40-208ENST00000572270 EVA1CP58658 441 aa19.66■□□□□ 0.74
CCDC40-208ENST00000572270 PHRF1Q9P1Y6 1649 aaKnown RBP19.65■□□□□ 0.74
CCDC40-208ENST00000572270 C11orf95C9JLR9 678 aaPredicted RBP19.65■□□□□ 0.74
CCDC40-208ENST00000572270 POGKQ9P215 609 aa19.65■□□□□ 0.74
CCDC40-208ENST00000572270 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
CCDC40-208ENST00000572270 SPATA31E1Q6ZUB1 1445 aa19.64■□□□□ 0.73
CCDC40-208ENST00000572270 SSH2Q76I76 1423 aa19.64■□□□□ 0.73
CCDC40-208ENST00000572270 ZBTB7AO95365 584 aa19.63■□□□□ 0.73
CCDC40-208ENST00000572270 NGDNQ8NEJ9 315 aaKnown RBP19.63■□□□□ 0.73
CCDC40-208ENST00000572270 TCP11L2Q8N4U5 519 aa19.62■□□□□ 0.73
CCDC40-208ENST00000572270 GIGYF1O75420 1035 aaPredicted RBP19.61■□□□□ 0.73
CCDC40-208ENST00000572270 ZC3H6P61129 1189 aaKnown RBP19.61■□□□□ 0.73
CCDC40-208ENST00000572270 ANO8Q9HCE9 1232 aaPredicted RBP19.61■□□□□ 0.73
CCDC40-208ENST00000572270 PARP4Q9UKK3 1724 aaKnown RBP19.61■□□□□ 0.73
CCDC40-208ENST00000572270 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
CCDC40-208ENST00000572270 FHDC1Q9C0D6 1143 aaPredicted RBP19.6■□□□□ 0.73
CCDC40-208ENST00000572270 C14orf93Q9H972 538 aaKnown RBP19.6■□□□□ 0.73
CCDC40-208ENST00000572270 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
CCDC40-208ENST00000572270 OVOS2A0A0G2JMS6 1433 aa19.59■□□□□ 0.73
CCDC40-208ENST00000572270 OVOS2A0A0J9YW53 1432 aa19.59■□□□□ 0.73
CCDC40-208ENST00000572270 OVOS2Q6IE36 1432 aa19.59■□□□□ 0.73
CCDC40-208ENST00000572270 PLSCR1O15162 318 aa19.59■□□□□ 0.73
CCDC40-208ENST00000572270 PTGER2P43116 358 aa19.59■□□□□ 0.73
CCDC40-208ENST00000572270 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
CCDC40-208ENST00000572270 BCL11BQ9C0K0 894 aaPredicted RBP19.59■□□□□ 0.73
CCDC40-208ENST00000572270 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.72
CCDC40-208ENST00000572270 ATF5Q9Y2D1 282 aaPredicted RBP19.58■□□□□ 0.72
CCDC40-208ENST00000572270 THRAP3Q9Y2W1 955 aaKnown RBP19.58■□□□□ 0.72
CCDC40-208ENST00000572270 ATP7BP35670 1465 aa19.57■□□□□ 0.72
CCDC40-208ENST00000572270 LARP1Q6PKG0 1096 aaKnown RBP19.57■□□□□ 0.72
CCDC40-208ENST00000572270 PDGFDQ9GZP0 370 aaPredicted RBP19.57■□□□□ 0.72
CCDC40-208ENST00000572270 CEP350Q5VT06 3117 aa19.57■□□□□ 0.72
CCDC40-208ENST00000572270 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
CCDC40-208ENST00000572270 SBF2Q86WG5 1849 aa19.56■□□□□ 0.72
CCDC40-208ENST00000572270 CFAP70Q5T0N1 1121 aa19.56■□□□□ 0.72
CCDC40-208ENST00000572270 ITSN1Q15811 1721 aa19.56■□□□□ 0.72
CCDC40-208ENST00000572270 PEAK1Q9H792 1746 aa19.54■□□□□ 0.72
CCDC40-208ENST00000572270 MINK1Q8N4C8 1332 aaPredicted RBP19.53■□□□□ 0.72
CCDC40-208ENST00000572270 STK32BQ9NY57 414 aa19.53■□□□□ 0.72
CCDC40-208ENST00000572270 NUTM2GQ5VZR2 741 aa19.52■□□□□ 0.72
CCDC40-208ENST00000572270 LMO7Q8WWI1 1683 aa19.52■□□□□ 0.71
CCDC40-208ENST00000572270 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
CCDC40-208ENST00000572270 MTFR1LQ9H019 292 aa19.51■□□□□ 0.71
CCDC40-208ENST00000572270 GPR162Q16538 588 aa19.49■□□□□ 0.71
CCDC40-208ENST00000572270 LRRC37A3O60309 1634 aa19.49■□□□□ 0.71
CCDC40-208ENST00000572270 TRAK1Q9UPV9 953 aa19.48■□□□□ 0.71
CCDC40-208ENST00000572270 CPDO75976 1380 aa19.47■□□□□ 0.71
CCDC40-208ENST00000572270 SLC15A2Q16348 729 aa19.47■□□□□ 0.71
CCDC40-208ENST00000572270 DDB1Q16531 1140 aa19.47■□□□□ 0.71
CCDC40-208ENST00000572270 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
CCDC40-208ENST00000572270 ARXQ96QS3 562 aa19.47■□□□□ 0.71
CCDC40-208ENST00000572270 COL5A2P05997 1499 aaPredicted RBP19.47■□□□□ 0.71
CCDC40-208ENST00000572270 CRB1P82279 1406 aa19.46■□□□□ 0.71
CCDC40-208ENST00000572270 MAP3K5Q99683 1374 aa19.45■□□□□ 0.7
CCDC40-208ENST00000572270 AKAP12Q02952 1782 aa19.45■□□□□ 0.7
CCDC40-208ENST00000572270 PROM2Q8N271 834 aa19.45■□□□□ 0.7
CCDC40-208ENST00000572270 SGIP1Q9BQI5 828 aa19.45■□□□□ 0.7
CCDC40-208ENST00000572270 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
CCDC40-208ENST00000572270 ADGRB1O14514 1584 aa19.44■□□□□ 0.7
CCDC40-208ENST00000572270 PTF1AQ7RTS3 328 aa19.43■□□□□ 0.7
CCDC40-208ENST00000572270 ABTB2Q8N961 1025 aa19.42■□□□□ 0.7
CCDC40-208ENST00000572270 NUDT16Q96DE0 195 aaKnown RBP19.42■□□□□ 0.7
CCDC40-208ENST00000572270 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
CCDC40-208ENST00000572270 WNK3Q9BYP7 1800 aa19.41■□□□□ 0.7
CCDC40-208ENST00000572270 PELP1Q8IZL8 1130 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms